MU66296 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU66296
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pigment defective 320 protein, putative
Location	chr6 : 2144523 .. 2146976 (+)
Sequence length	695

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GCTAAACCCACAGCCACCCTCTACGCTCTTCCCAATTCTCTCTTCGGAGTTTTCAAGAAACGGCATCAATGGCGAACCTCAGAACTGCCATGGATTCCGCCTTCTGGGACTTTAACCTTTCTTCTCCTCAAACCCTCGCCGGAACCGCCAAATCCGTCCCCGGCGAACCATTTCCTCTCAATGGAGCTCGAGCCAGTCGTGCCCTCAGGATTCAGCAACTCTCCCTCCTCGGCGATGGGTTTCCTCTCGGAATTATCCCTTCATACTCTCCAACTGCTCACAAGGAGTTAGGCTCCTTTTCTCTTCAGTCGCTCTTGCTCAGGCTGTCTGGCGCCCGTTGGTGGGTTGGATTGGTTGGTCAATTTCGTCCAAAGAAACTGATATCTCTTCTAAAAGCTAAACTTTCTGATGAGGACGGCTTTGAGCTCTCTGACCTGAAAGACGTTGCTCGTCTGTTATTGGACAAATCACACTATACGTATGGTATATGCTCTCAGTTTTCTCCTAGTCCATTTTCATCTGTATATGTCAGCACAGAAAAGCATGGTGAGAGGAAAGGGCGTCGCCACAAAGCGATGTTTTATCACAGGCTTCCTCAGCATGATATAAATGTGGATGCGGCTTGGCCAGAGCTCTTCATTGATCATAAAGGTCAATATTGGGATGTTCCCGAGTCTATATCTTTGGATCTTTCA

Library


Library category	ESTs
melon CM-TEa library	1

Homology

[Close]

BLAST of MU66296 vs. Swiss-Prot
Match: TGD4_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Arabidopsis thaliana GN=TGD4 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-20
Identity = 66/218 (30.28%), Postives = 92/218 (42.20%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           M  +R   +   WD ++S+P TL GTA++VP +P PL  +R +R  R +Q+         
Sbjct: 1   MNRMRWVGEGDIWDLDMSTPVTLEGTARAVPDDPLPLGLSRGTRLSRPKQVEFFHRFMAS 60

Query: 129 GIIPSYSP----TAHKEXXXXXXXXXXXXXXGARWWVGLVGQF---RPXXXXXXXXXXXX 188
            +IPS+SP    T                     W V L+GQF   R             
Sbjct: 61  PLIPSFSPIRPNTGDGGGGGFSLQRVLTLPFSNNWLVSLLGQFDVQRFVTEIDKTKAFGR 120

Query: 189 DEDGFELSDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTE--KHGERKGRRHKAMF 248
                  S L  + + L DKS Y  G C               +  K    K  R KA+F
Sbjct: 121 GSSSTVASRLNTIGKHLKDKSLYALGFCSEFLLSPDDTLLLSYDAYKGDLDKNPRAKAIF 180

Query: 249 YHRLPQHDINVDAAWPELFIDHKGQYWDVPESISLDLS 308
            H  P H++  +A WP LF+D  G+YWDVP S+++DL+
Sbjct: 181 NHEFPLHNLTAEAVWPGLFVDKHGEYWDVPLSMAIDLA 218

Query: 309  368
           
Sbjct: 241  218

Query: 369  428
           
Sbjct: 301  218

Query: 429  488
           
Sbjct: 361  218

Query: 489  548
           
Sbjct: 421  218

Query: 549  608
           
Sbjct: 481  218

Query: 609  668
           
Sbjct: 541  218

Query: 669  696
           
Sbjct: 601  218

[Close]

BLAST of MU66296 vs. TrEMBL
Match: A0A0A0L4I9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128880 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.2e-75
Identity = 144/209 (68.90%), Postives = 152/209 (72.73%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           MA LRTAMDSAFWD N+SSPQTLAGTAK+VPGEPFPL+GARASR LRIQQLS LG+GFPL
Sbjct: 1   MAYLRTAMDSAFWDLNISSPQTLAGTAKAVPGEPFPLDGARASRTLRIQQLSFLGNGFPL 60

Query: 129 GIIPSYSPTAHKEXXXXXXXXXXXXXXGARWWVGLVGQFRPXXXXXXXXXXXXDEDGFEL 188
           GIIPSY PTAHKE                +WW GLVGQFRP              +  EL
Sbjct: 61  GIIPSYCPTAHKELGSFSLQSLLFMMPSVKWWAGLVGQFRPKKLISSIKAQISAVEQLEL 120

Query: 189 SDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTEKHGERKGRRHKAMFYHRLPQHDI 248
           SDLKD+A L LDKS YTYGIC              TEK GERKG RHKAMFYHRLP+HDI
Sbjct: 121 SDLKDIASLFLDKSLYTYGICSQFSTGPFSSVYVSTEKLGERKGHRHKAMFYHRLPEHDI 180

Query: 249 NVDAAWPELFIDHKGQYWDVPESISLDLS 308
           NVDAAWPELFIDHKGQYWDVPESISLDLS
Sbjct: 181 NVDAAWPELFIDHKGQYWDVPESISLDLS 209

Query: 309  368
           
Sbjct: 241  209

Query: 369  428
           
Sbjct: 301  209

Query: 429  488
           
Sbjct: 361  209

Query: 489  548
           
Sbjct: 421  209

Query: 549  608
           
Sbjct: 481  209

Query: 609  668
           
Sbjct: 541  209

Query: 669  696
           
Sbjct: 601  209

[Close]

BLAST of MU66296 vs. TrEMBL
Match: M5X101_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005217mg PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 9.4e-67
Identity = 124/209 (59.33%), Postives = 149/209 (71.29%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           MANLRTAMDSAFWD N+SSP TL G+AK++PG+PFP++GARASR LRIQQLSLLG+GFPL
Sbjct: 1   MANLRTAMDSAFWDLNVSSPHTLEGSAKAIPGDPFPIDGARASRVLRIQQLSLLGNGFPL 60

Query: 129 GIIPSYSPTAHKEXXXXXXXXXXXXXXGARWWVGLVGQFRPXXXXXXXXXXXXDEDGFEL 188
           GIIPSYSPT+HK+               + WW+GL+GQFRP              D  E+
Sbjct: 61  GIIPSYSPTSHKDLGSFSLQSLLLRPATSNWWLGLIGQFRPKKLISSIKAEFSTNDDMEV 120

Query: 189 SDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTEKHGERKGRRHKAMFYHRLPQHDI 248
              KDVA+ +LDKS Y++G+C              TE HGE+KGRR+K M +H+LP HDI
Sbjct: 121 PTFKDVAKHVLDKSLYSFGLCTQLLVAPSSSIKLSTEGHGEKKGRRNKFMLFHKLPYHDI 180

Query: 249 NVDAAWPELFIDHKGQYWDVPESISLDLS 308
            ++AAWPELFIDHKGQYWDVPESISLDLS
Sbjct: 181 TLEAAWPELFIDHKGQYWDVPESISLDLS 209

Query: 309  368
           
Sbjct: 241  209

Query: 369  428
           
Sbjct: 301  209

Query: 429  488
           
Sbjct: 361  209

Query: 489  548
           
Sbjct: 421  209

Query: 549  608
           
Sbjct: 481  209

Query: 609  668
           
Sbjct: 541  209

Query: 669  696
           
Sbjct: 601  209

[Close]

BLAST of MU66296 vs. TrEMBL
Match: D7SM50_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00530 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.0e-61
Identity = 115/209 (55.02%), Postives = 147/209 (70.33%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           MANLRTAMD+AFWD ++SSPQTL G A++VPG+PFPL GARASRALR+QQLS LG+GFPL
Sbjct: 1   MANLRTAMDAAFWDLDISSPQTLHGAARAVPGDPFPLEGARASRALRVQQLSFLGNGFPL 60

Query: 129 GIIPSYSPTAHKEXXXXXXXXXXXXXXGARWWVGLVGQFRPXXXXXXXXXXXXDEDGFEL 188
           GIIPS+SPT+ K+               + WW+GL GQFRP              D +EL
Sbjct: 61  GIIPSFSPTSQKDLGSFSLQSLFLRPSTSNWWLGLTGQFRPKKLISSIKADLSAVDEWEL 120

Query: 189 SDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTEKHGERKGRRHKAMFYHRLPQHDI 248
           S  K+VA+  +DKS +++G+C              TE+HGE+KGRR++ M +H+LP HDI
Sbjct: 121 STFKEVAKHFIDKSLFSFGLCSQLSLTSASSLMVSTEQHGEKKGRRNRVMLFHQLPFHDI 180

Query: 249 NVDAAWPELFIDHKGQYWDVPESISLDLS 308
            ++AAWPELFIDHKG+YW++PESISL LS
Sbjct: 181 TLEAAWPELFIDHKGRYWELPESISLGLS 209

Query: 309  368
           
Sbjct: 241  209

Query: 369  428
           
Sbjct: 301  209

Query: 429  488
           
Sbjct: 361  209

Query: 489  548
           
Sbjct: 421  209

Query: 549  608
           
Sbjct: 481  209

Query: 609  668
           
Sbjct: 541  209

Query: 669  696
           
Sbjct: 601  209

[Close]

BLAST of MU66296 vs. TrEMBL
Match: M0ZN42_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401001686 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.0e-61
Identity = 114/209 (54.55%), Postives = 145/209 (69.38%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           MAN+RTAMD+AFWD N+S+P+TL GTA+S+PGEP PL+ + AS+ALRIQQLSLLG+GFPL
Sbjct: 1   MANMRTAMDAAFWDLNISTPRTLDGTARSIPGEPIPLDRSTASKALRIQQLSLLGNGFPL 60

Query: 129 GIIPSYSPTAHKEXXXXXXXXXXXXXXGARWWVGLVGQFRPXXXXXXXXXXXXDEDGFEL 188
           GIIPSYSPT+ KE               + WW+G  GQFRP              D +EL
Sbjct: 61  GIIPSYSPTSRKELGSFALQSLLFKAATSNWWLGFTGQFRPKKLVSDIKAELSSVDEWEL 120

Query: 189 SDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTEKHGERKGRRHKAMFYHRLPQHDI 248
             LKD+ +  L+KS Y +G+C              TEKHGE+KGRR +AM +H+LP+HD+
Sbjct: 121 PILKDIGKHFLEKSLYAFGLCSQLSLTPSSSLLLSTEKHGEKKGRRLRAMLFHKLPEHDV 180

Query: 249 NVDAAWPELFIDHKGQYWDVPESISLDLS 308
            ++AAWPELF+DHKG+YW+VPESISLD S
Sbjct: 181 TLEAAWPELFLDHKGRYWEVPESISLDCS 209

Query: 309  368
           
Sbjct: 241  209

Query: 369  428
           
Sbjct: 301  209

Query: 429  488
           
Sbjct: 361  209

Query: 489  548
           
Sbjct: 421  209

Query: 549  608
           
Sbjct: 481  209

Query: 609  668
           
Sbjct: 541  209

Query: 669  696
           
Sbjct: 601  209

[Close]

BLAST of MU66296 vs. TrEMBL
Match: K4AYQ0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 8.6e-60
Identity = 112/207 (54.11%), Postives = 142/207 (68.60%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           MAN+RTAMD+AFWD N+S+P+ L GTA+S+PGEP PL+ + AS+ALRIQQLSLLG+GFPL
Sbjct: 1   MANMRTAMDAAFWDLNISTPRALDGTARSIPGEPIPLDRSTASKALRIQQLSLLGNGFPL 60

Query: 129 GIIPSYSPTAHKEXXXXXXXXXXXXXXGARWWVGLVGQFRPXXXXXXXXXXXXDEDGFEL 188
           GIIPSYSPT  KE               + WW+G  GQFRP              D +EL
Sbjct: 61  GIIPSYSPTTRKELGSFALQSLLFKAATSNWWLGFTGQFRPKKLVSDIKAELSSVDEWEL 120

Query: 189 SDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTEKHGERKGRRHKAMFYHRLPQHDI 248
             LKD+ +  L+KS Y +G+C              TEKHGE+KGRR +AM +H+LP++DI
Sbjct: 121 PILKDIGKHFLEKSLYAFGLCSQLSLTPSSSLLLSTEKHGEKKGRRLRAMLFHKLPEYDI 180

Query: 249 NVDAAWPELFIDHKGQYWDVPESISLD 308
            ++AAWPELF+DHKG+YW+VPESISLD
Sbjct: 181 TLEAAWPELFLDHKGRYWEVPESISLD 207

Query: 309  368
           
Sbjct: 241  207

Query: 369  428
           
Sbjct: 301  207

Query: 429  488
           
Sbjct: 361  207

Query: 489  548
           
Sbjct: 421  207

Query: 549  608
           
Sbjct: 481  207

Query: 609  668
           
Sbjct: 541  207

Query: 669  690
           
Sbjct: 601  207

[Close]

BLAST of MU66296 vs. TAIR10
Match: AT2G44640.1 (AT2G44640.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 208.8 bits (530), Expect = 3.7e-54
Identity = 101/209 (48.33%), Postives = 136/209 (65.07%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           MANL +A+DS FWD N+SSPQTL GTA+SVPGEPFPL+GARASR+ RIQQLSLL +GFPL
Sbjct: 1   MANLNSAIDSVFWDQNVSSPQTLEGTARSVPGEPFPLDGARASRSHRIQQLSLLREGFPL 60

Query: 129 GIIPSYSPTAHKEXXXXXXXXXXXXXXGARWWVGLVGQFRPXXXXXXXXXXXXDEDGFEL 188
           GIIPS +P + K                  WW+GLVGQF+P            + + ++L
Sbjct: 61  GIIPSLAPASDKRLGSFSLNSLLLSPSSNNWWLGLVGQFKPKKLFADIKADISNAEEWDL 120

Query: 189 SDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTEKHGERKGRRHKAMFYHRLPQHDI 248
             +KD A+ ++DKS Y+ G+               TE+ G++ G R+K M  H L +HD+
Sbjct: 121 QVVKDTAKHIVDKSLYSIGLWTQIALGTSSSLLLSTERLGDKNGLRNKLMLVHPLEKHDL 180

Query: 249 NVDAAWPELFIDHKGQYWDVPESISLDLS 308
            V+AAWP+LF+D+KG++WDVPES+++D+S
Sbjct: 181 TVEAAWPDLFLDNKGRFWDVPESLNVDVS 209

Query: 309  368
           
Sbjct: 241  209

Query: 369  428
           
Sbjct: 301  209

Query: 429  488
           
Sbjct: 361  209

Query: 489  548
           
Sbjct: 421  209

Query: 549  608
           
Sbjct: 481  209

Query: 609  668
           
Sbjct: 541  209

Query: 669  696
           
Sbjct: 601  209

[Close]

BLAST of MU66296 vs. TAIR10
Match: AT3G06960.1 (AT3G06960.1 pigment defective 320)

HSP 1 Score: 101.3 bits (251), Expect = 8.3e-22
Identity = 66/218 (30.28%), Postives = 92/218 (42.20%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           M  +R   +   WD ++S+P TL GTA++VP +P PL  +R +R  R +Q+         
Sbjct: 1   MNRMRWVGEGDIWDLDMSTPVTLEGTARAVPDDPLPLGLSRGTRLSRPKQVEFFHRFMAS 60

Query: 129 GIIPSYSP----TAHKEXXXXXXXXXXXXXXGARWWVGLVGQF---RPXXXXXXXXXXXX 188
            +IPS+SP    T                     W V L+GQF   R             
Sbjct: 61  PLIPSFSPIRPNTGDGGGGGFSLQRVLTLPFSNNWLVSLLGQFDVQRFVTEIDKTKAFGR 120

Query: 189 DEDGFELSDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTE--KHGERKGRRHKAMF 248
                  S L  + + L DKS Y  G C               +  K    K  R KA+F
Sbjct: 121 GSSSTVASRLNTIGKHLKDKSLYALGFCSEFLLSPDDTLLLSYDAYKGDLDKNPRAKAIF 180

Query: 249 YHRLPQHDINVDAAWPELFIDHKGQYWDVPESISLDLS 308
            H  P H++  +A WP LF+D  G+YWDVP S+++DL+
Sbjct: 181 NHEFPLHNLTAEAVWPGLFVDKHGEYWDVPLSMAIDLA 218

Query: 309  368
           
Sbjct: 241  218

Query: 369  428
           
Sbjct: 301  218

Query: 429  488
           
Sbjct: 361  218

Query: 489  548
           
Sbjct: 421  218

Query: 549  608
           
Sbjct: 481  218

Query: 609  668
           
Sbjct: 541  218

Query: 669  696
           
Sbjct: 601  218

[Close]

BLAST of MU66296 vs. NCBI nr
Match: gi|659075684|ref|XP_008438274.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucumis melo])

HSP 1 Score: 342.0 bits (876), Expect = 7.9e-91
Identity = 169/209 (80.86%), Postives = 169/209 (80.86%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL
Sbjct: 1   MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 60

Query: 129 GIIPSYSPTAHKEXXXXXXXXXXXXXXGARWWVGLVGQFRPXXXXXXXXXXXXDEDGFEL 188
           GIIPSYSPTAHKE              GARWWVGLVGQFRP            DEDGFEL
Sbjct: 61  GIIPSYSPTAHKELGSFSLQSLLLRLSGARWWVGLVGQFRPKKLISLLKAKLSDEDGFEL 120

Query: 189 SDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTEKHGERKGRRHKAMFYHRLPQHDI 248
           SDLKDVARLLLDKSHYTYGIC              TEKHGERKGRRHKAMFYHRLPQHDI
Sbjct: 121 SDLKDVARLLLDKSHYTYGICSQFSPSPFSSVYVSTEKHGERKGRRHKAMFYHRLPQHDI 180

Query: 249 NVDAAWPELFIDHKGQYWDVPESISLDLS 308
           NVDAAWPELFIDHKGQYWDVPESISLDLS
Sbjct: 181 NVDAAWPELFIDHKGQYWDVPESISLDLS 209

Query: 309  368
           
Sbjct: 241  209

Query: 369  428
           
Sbjct: 301  209

Query: 429  488
           
Sbjct: 361  209

Query: 489  548
           
Sbjct: 421  209

Query: 549  608
           
Sbjct: 481  209

Query: 609  668
           
Sbjct: 541  209

Query: 669  696
           
Sbjct: 601  209

[Close]

BLAST of MU66296 vs. NCBI nr
Match: gi|449432352|ref|XP_004133963.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucumis sativus])

HSP 1 Score: 290.8 bits (743), Expect = 2.1e-75
Identity = 144/209 (68.90%), Postives = 152/209 (72.73%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           MA LRTAMDSAFWD N+SSPQTLAGTAK+VPGEPFPL+GARASR LRIQQLS LG+GFPL
Sbjct: 1   MAYLRTAMDSAFWDLNISSPQTLAGTAKAVPGEPFPLDGARASRTLRIQQLSFLGNGFPL 60

Query: 129 GIIPSYSPTAHKEXXXXXXXXXXXXXXGARWWVGLVGQFRPXXXXXXXXXXXXDEDGFEL 188
           GIIPSY PTAHKE                +WW GLVGQFRP              +  EL
Sbjct: 61  GIIPSYCPTAHKELGSFSLQSLLFMMPSVKWWAGLVGQFRPKKLISSIKAQISAVEQLEL 120

Query: 189 SDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTEKHGERKGRRHKAMFYHRLPQHDI 248
           SDLKD+A L LDKS YTYGIC              TEK GERKG RHKAMFYHRLP+HDI
Sbjct: 121 SDLKDIASLFLDKSLYTYGICSQFSTGPFSSVYVSTEKLGERKGHRHKAMFYHRLPEHDI 180

Query: 249 NVDAAWPELFIDHKGQYWDVPESISLDLS 308
           NVDAAWPELFIDHKGQYWDVPESISLDLS
Sbjct: 181 NVDAAWPELFIDHKGQYWDVPESISLDLS 209

Query: 309  368
           
Sbjct: 241  209

Query: 369  428
           
Sbjct: 301  209

Query: 429  488
           
Sbjct: 361  209

Query: 489  548
           
Sbjct: 421  209

Query: 549  608
           
Sbjct: 481  209

Query: 609  668
           
Sbjct: 541  209

Query: 669  696
           
Sbjct: 601  209

[Close]

BLAST of MU66296 vs. NCBI nr
Match: gi|645252835|ref|XP_008232303.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Prunus mume])

HSP 1 Score: 263.1 bits (671), Expect = 4.7e-67
Identity = 124/209 (59.33%), Postives = 149/209 (71.29%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           MANLRTAMDSAFWD N+SSP TL G+AK++PG+PFP++GARASR LRIQQLSLLG+GFPL
Sbjct: 1   MANLRTAMDSAFWDLNVSSPHTLEGSAKAIPGDPFPIDGARASRVLRIQQLSLLGNGFPL 60

Query: 129 GIIPSYSPTAHKEXXXXXXXXXXXXXXGARWWVGLVGQFRPXXXXXXXXXXXXDEDGFEL 188
           GIIPSYSPT+HK+               + WW+GL+GQFRP              D  E+
Sbjct: 61  GIIPSYSPTSHKDLGSFSLQSLLLRPATSNWWLGLIGQFRPKKLISSIKAEFSTNDDMEV 120

Query: 189 SDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTEKHGERKGRRHKAMFYHRLPQHDI 248
              KDVA+ +LDKS Y++G+C              TE HGE+KGRR+K M +H+LP HDI
Sbjct: 121 PTFKDVAKHVLDKSLYSFGLCTQLLVAPSSSIKLSTEGHGEKKGRRNKFMLFHKLPYHDI 180

Query: 249 NVDAAWPELFIDHKGQYWDVPESISLDLS 308
            ++AAWPELFIDHKGQYWDVPESISLDLS
Sbjct: 181 TLEAAWPELFIDHKGQYWDVPESISLDLS 209

Query: 309  368
           
Sbjct: 241  209

Query: 369  428
           
Sbjct: 301  209

Query: 429  488
           
Sbjct: 361  209

Query: 489  548
           
Sbjct: 421  209

Query: 549  608
           
Sbjct: 481  209

Query: 609  668
           
Sbjct: 541  209

Query: 669  696
           
Sbjct: 601  209

[Close]

BLAST of MU66296 vs. NCBI nr
Match: gi|595999061|ref|XP_007217957.1| (hypothetical protein PRUPE_ppa005217mg [Prunus persica])

HSP 1 Score: 263.1 bits (671), Expect = 4.7e-67
Identity = 124/209 (59.33%), Postives = 149/209 (71.29%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           MANLRTAMDSAFWD N+SSP TL G+AK++PG+PFP++GARASR LRIQQLSLLG+GFPL
Sbjct: 1   MANLRTAMDSAFWDLNVSSPHTLEGSAKAIPGDPFPIDGARASRVLRIQQLSLLGNGFPL 60

Query: 129 GIIPSYSPTAHKEXXXXXXXXXXXXXXGARWWVGLVGQFRPXXXXXXXXXXXXDEDGFEL 188
           GIIPSYSPT+HK+               + WW+GL+GQFRP              D  E+
Sbjct: 61  GIIPSYSPTSHKDLGSFSLQSLLLRPATSNWWLGLIGQFRPKKLISSIKAEFSTNDDMEV 120

Query: 189 SDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTEKHGERKGRRHKAMFYHRLPQHDI 248
              KDVA+ +LDKS Y++G+C              TE HGE+KGRR+K M +H+LP HDI
Sbjct: 121 PTFKDVAKHVLDKSLYSFGLCTQLLVAPSSSIKLSTEGHGEKKGRRNKFMLFHKLPYHDI 180

Query: 249 NVDAAWPELFIDHKGQYWDVPESISLDLS 308
            ++AAWPELFIDHKGQYWDVPESISLDLS
Sbjct: 181 TLEAAWPELFIDHKGQYWDVPESISLDLS 209

Query: 309  368
           
Sbjct: 241  209

Query: 369  428
           
Sbjct: 301  209

Query: 429  488
           
Sbjct: 361  209

Query: 489  548
           
Sbjct: 421  209

Query: 549  608
           
Sbjct: 481  209

Query: 609  668
           
Sbjct: 541  209

Query: 669  696
           
Sbjct: 601  209

[Close]

BLAST of MU66296 vs. NCBI nr
Match: gi|694423676|ref|XP_009339635.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 258.8 bits (660), Expect = 8.8e-66
Identity = 124/209 (59.33%), Postives = 150/209 (71.77%), Query Frame = 3


Query: 69  MANLRTAMDSAFWDFNLSSPQTLAGTAKSVPGEPFPLNGARASRALRIQQLSLLGDGFPL 128
           MANLRTAMDSAFWD N+SSPQTL G+AK+VPG+PFPL+G+RASRALRIQQLSLLG+GFPL
Sbjct: 1   MANLRTAMDSAFWDLNVSSPQTLEGSAKAVPGDPFPLDGSRASRALRIQQLSLLGNGFPL 60

Query: 129 GIIPSYSPTAHKEXXXXXXXXXXXXXXGARWWVGLVGQFRPXXXXXXXXXXXXDEDGFEL 188
           GIIPSYSPT+HKE               + WW+GL+GQFRP            + D  E+
Sbjct: 61  GIIPSYSPTSHKELGSFSLQSLLLRPATSNWWLGLIGQFRPKKLFSSIKAEFTN-DEMEV 120

Query: 189 SDLKDVARLLLDKSHYTYGICXXXXXXXXXXXXXXTEKHGERKGRRHKAMFYHRLPQHDI 248
              KDVA+ + DKS Y++G+C              TE HGE+KGRR+K M +H+LP HDI
Sbjct: 121 PAFKDVAKHVFDKSLYSFGLCTQLLLSPSSSIKLSTEGHGEKKGRRNKLMIFHKLPYHDI 180

Query: 249 NVDAAWPELFIDHKGQYWDVPESISLDLS 308
            ++AAWPELF+DHKG YWDVPESISLD+S
Sbjct: 181 TLEAAWPELFVDHKGNYWDVPESISLDMS 208

Query: 309  368
           
Sbjct: 241  208

Query: 369  428
           
Sbjct: 301  208

Query: 429  488
           
Sbjct: 361  208

Query: 489  548
           
Sbjct: 421  208

Query: 549  608
           
Sbjct: 481  208

Query: 609  668
           
Sbjct: 541  208

Query: 669  696
           
Sbjct: 601  208

The following BLAST results are available for this feature:

BLAST of MU66296 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TGD4_ARATH	1.5e-20	30.28	Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Arabidopsis thaliana GN=...	[more]

BLAST of MU66296 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4I9_CUCSA	4.2e-75	68.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128880 PE=4 SV=1	[more]
M5X101_PRUPE	9.4e-67	59.33	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005217mg PE=4 SV=1	[more]
D7SM50_VITVI	2.0e-61	55.02	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00530 PE=4 SV=...	[more]
M0ZN42_SOLTU	2.0e-61	54.55	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401001686 PE=4 SV=1	[more]
K4AYQ0_SOLLC	8.6e-60	54.11	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of MU66296 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44640.1	3.7e-54	48.33	FUNCTIONS IN: molecular_function unknown	[more]
AT3G06960.1	8.3e-22	30.28	pigment defective 320	[more]

BLAST of MU66296 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075684\|ref\|XP_008438274.1\|	7.9e-91	80.86	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucumis melo]	[more]
gi\|449432352\|ref\|XP_004133963.1\|	2.1e-75	68.90	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucumis sativus...	[more]
gi\|645252835\|ref\|XP_008232303.1\|	4.7e-67	59.33	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Prunus mume]	[more]
gi\|595999061\|ref\|XP_007217957.1\|	4.7e-67	59.33	hypothetical protein PRUPE_ppa005217mg [Prunus persica]	[more]
gi\|694423676\|ref\|XP_009339635.1\|	8.8e-66	59.33	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Pyrus x bretsch...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006267	MELO3C006267	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
TEa0013D19	TEa0013D19	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34954	FAMILY NOT NAMED	coord: 2..209 score: 2.8E
None	No IPR available	PANTHER	PTHR34954:SF2	EXPRESSED PROTEIN	coord: 2..209 score: 2.8E