MU66187 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU66187
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionArmadillo/beta-catenin repeat protein
Locationchr1 : 27542577 .. 27543583 (-)
Sequence length596
The following sequences are available for this feature:

transcribed_cluster sequence

GTGGACTTGGGTAGTGAGAGCCATGTTCTGATGGTAGTGAGAGCCATGTTCTGATAATATTGTTCATATTATCATATTAATCAAAATCTTGTTTCTGACAGATGGGAACAGCCTCTGTACAATGTCTGACAAACAGTAATTCCAGTTTCATTCATCTAGTTTCAAGCCACACTACAAAGCCTTTGCCTCTTCCCAAGAAATGCAGAAATCTCGTTGTTGTCTTAGAAATTCTGAAAGTCGTCCTTGATGATGTCATTAGCCTCAAACTCTACTTCAGATGAGTTATTTTATACTGAATGTGAGTCACTGGATGCAGCTGTATATGAGGCTCGAGAATTCATCGAAAAATGGCATCTGAAGACAGAAAAATTTGCAGTAAATGTCTTAAAGGCTTTCAATCATGGAAGCAAGGAAGGATAGTTGAATCTTATTGAAGAGGCTCTAATTAGTCAAAGAAATGGCATTGGCCTCAACTCTGACATCTTTTAAACCTGATCGAAGCACTTCATTTGAAGTCAAAATCGCTGCTGAACACGACAATGCGAAGGAGGAACACTACATCACATCCACCAGATTATGGATCGAGTTATCCTTAT
Library categoryESTs
melon CM-TEa library1
BLAST of MU66187 vs. TrEMBL
Match: A0A0A0K726_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374670 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-09
Identity = 36/56 (64.29%), Postives = 37/56 (66.07%), Query Frame = 3

Query: 102 MGTASVQCLTNSNSSFIHLVSSHTTKPLPLPKKCRNXXXXXXXXXXXXXXXXSLKL 161
           MGTASVQCLTNS S FIHLVS HTTKPLPLPKKC+N                SLKL
Sbjct: 1   MGTASVQCLTNSISRFIHLVSCHTTKPLPLPKKCKNLVVVLKLLKVVLDDVISLKL 56

Query: 162 221
           
Sbjct: 61  56

Query: 222 270
           
Sbjct: 121 56

BLAST of MU66187 vs. TrEMBL
Match: A0A0A0K726_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374670 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.8e-03
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 1

Query: 277 DELFYTECESLDAAVYEAREFIEKWHLKTEK 336
           DEL Y+ECESLDAAV EAREF+E W  KT K
Sbjct: 59  DELLYSECESLDAAVNEAREFVENWCPKTSK 89

Query: 337 370
           
Sbjct: 119 89


HSP 2 Score: 48.9 bits (115), Expect = 8.2e-03
Identity = 49/158 (31.01%), Postives = 64/158 (40.51%), Query Frame = 1

Query: 277 DELFYTECESLDAAVYEAREFIEKW----------------------------------- 336
           DEL Y+ECESLDAAV EAREF+E W                                   
Sbjct: 59  DELLYSECESLDAAVNEAREFVENWCPKTSKICSALKCDPLLIKIQSSSQVICEIIWKLS 118

Query: 337 ---HLKTEKFAVN-VLKAFNHGSKEG*LNLIEEALISQRNGIGLNSD--------IF*T* 396
                 +   AV   L+      +E   + IEEALISQR+GIG NS+        +  T 
Sbjct: 119 ESVSCSSSLSAVQKCLEGLQSLKQERISDSIEEALISQRSGIGPNSEHLLKLIEALHLTS 178

Query: 397 SKHF------I*SQNRC*TRQCEGGTLHHIHQIMDRVI 456
           ++        +  +     R      LHHI+QIMD +I
Sbjct: 179 NQELLKETIAVEKERINAARNNAKEELHHINQIMDLII 216

Query: 457 516
           
Sbjct: 239 216

Query: 517 576
           
Sbjct: 299 216

Query: 577 592
           
Sbjct: 359 216

BLAST of MU66187 vs. NCBI nr
Match: gi|778727369|ref|XP_011659248.1| (PREDICTED: uncharacterized protein LOC101202866 isoform X1 [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 7.4e-13
Identity = 52/125 (41.60%), Postives = 62/125 (49.60%), Query Frame = 3

Query: 33  GSESHVLIILFILSY*SKSCF*QMGTASVQCLTNSNSSFIHLVSSHTTKPLPLPKKCRNX 92
           GSESHVL++  +           MGTASVQCL NS S FIHLVS HTTKPLPLPKKCRN 
Sbjct: 97  GSESHVLMVKEM-----------MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNL 156

Query: 93  XXXXXXXXXXXXXXXSLKLYFR*VILY*M*VTGCSCI*GSRIHRKMASEDRKICSKCLKG 152
                          +LKL    ++         +         K   +  K  +KCL+G
Sbjct: 157 VVVLKLLKVVLDDVINLKLSSDELLYSECESLDAAVYEAREFIEKWCLKTAKF-TKCLEG 209

Query: 153 FQSWK 212
            QSWK
Sbjct: 217 LQSWK 209

Query: 213 272
           
Sbjct: 277 209

Query: 273 332
           
Sbjct: 337 209

Query: 333 392
           
Sbjct: 397 209

Query: 393 408
           
Sbjct: 457 209

BLAST of MU66187 vs. NCBI nr
Match: gi|778727372|ref|XP_011659249.1| (PREDICTED: uncharacterized protein LOC101202866 isoform X2 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-12
Identity = 52/125 (41.60%), Postives = 60/125 (48.00%), Query Frame = 3

Query: 33  GSESHVLIILFILSY*SKSCF*QMGTASVQCLTNSNSSFIHLVSSHTTKPLPLPKKCRNX 92
           GSESHVL+               MGTASVQCL NS S FIHLVS HTTKPLPLPKKCRN 
Sbjct: 97  GSESHVLM---------------MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNL 156

Query: 93  XXXXXXXXXXXXXXXSLKLYFR*VILY*M*VTGCSCI*GSRIHRKMASEDRKICSKCLKG 152
                          +LKL    ++         +         K   +  K  +KCL+G
Sbjct: 157 VVVLKLLKVVLDDVINLKLSSDELLYSECESLDAAVYEAREFIEKWCLKTAKF-TKCLEG 205

Query: 153 FQSWK 212
            QSWK
Sbjct: 217 LQSWK 205

Query: 213 272
           
Sbjct: 277 205

Query: 273 332
           
Sbjct: 337 205

Query: 333 392
           
Sbjct: 397 205

Query: 393 408
           
Sbjct: 457 205

BLAST of MU66187 vs. NCBI nr
Match: gi|659100738|ref|XP_008451242.1| (PREDICTED: U-box domain-containing protein 3 [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 2.2e-09
Identity = 37/56 (66.07%), Postives = 37/56 (66.07%), Query Frame = 3

Query: 102 MGTASVQCLTNSNSSFIHLVSSHTTKPLPLPKKCRNXXXXXXXXXXXXXXXXSLKL 161
           MGTASVQCLTNS S FIHLVS HTTKPLPLPKKCRN                SLKL
Sbjct: 1   MGTASVQCLTNSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVISLKL 56

Query: 162 221
           
Sbjct: 61  56

Query: 222 270
           
Sbjct: 121 56

BLAST of MU66187 vs. NCBI nr
Match: gi|778727334|ref|XP_011659243.1| (PREDICTED: U-box domain-containing protein 3 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 5.0e-09
Identity = 36/56 (64.29%), Postives = 37/56 (66.07%), Query Frame = 3

Query: 102 MGTASVQCLTNSNSSFIHLVSSHTTKPLPLPKKCRNXXXXXXXXXXXXXXXXSLKL 161
           MGTASVQCLTNS S FIHLVS HTTKPLPLPKKC+N                SLKL
Sbjct: 1   MGTASVQCLTNSISRFIHLVSCHTTKPLPLPKKCKNLVVVLKLLKVVLDDVISLKL 56

Query: 162 221
           
Sbjct: 61  56

Query: 222 270
           
Sbjct: 121 56

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K726_CUCSA3.5e-0964.29Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374670 PE=4 SV=1[more]
A0A0A0K726_CUCSA2.8e-0374.19Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374670 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778727369|ref|XP_011659248.1|7.4e-1341.60PREDICTED: uncharacterized protein LOC101202866 isoform X1 [Cucumis sativus][more]
gi|778727372|ref|XP_011659249.1|1.6e-1241.60PREDICTED: uncharacterized protein LOC101202866 isoform X2 [Cucumis sativus][more]
gi|659100738|ref|XP_008451242.1|2.2e-0966.07PREDICTED: U-box domain-containing protein 3 [Cucumis melo][more]
gi|778727334|ref|XP_011659243.1|5.0e-0964.29PREDICTED: U-box domain-containing protein 3 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C015721MELO3C015721gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
TEa0011B19TEa0011B19EST