MU65878 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU65878
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Molybdopterin biosynthesis protein CNX1
Location	chr2 : 3195947 .. 3197068 (-)
Sequence length	123

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CAATGCCTCCCCCCTTATCGTCGTCTCTCTTCACGATGCTATTGGGAAGGTCTTGGCTCAAGACATTCGCGCTTCTGACCCTTTGCCCCCTTATCCAGCCTTCCCATTAAGGATGGCTATGCA

Library


Library category	ESTs
melon CM-TEa library	1

Homology

[Close]

BLAST of MU65878 vs. Swiss-Prot
Match: CNX1_ARATH (Molybdopterin biosynthesis protein CNX1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-06
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 2


Query: 11  PLIVVSLHDAIGKVLAQDIRASDPLPPYPA 70
           P ++VSL++A+GKVLA+DIRA DPLPPYPA
Sbjct: 34  PPVIVSLYEALGKVLAEDIRAPDPLPPYPA 63

Query: 71   101
           
Sbjct: 94   63

[Close]

BLAST of MU65878 vs. TrEMBL
Match: A0A0A0LZS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600220 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 9.4e-07
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2


Query: 11  PLIVVSLHDAIGKVLAQDIRASDPLPPYPA 70
           P IVVSLHDA+GKVLAQDIRASDPLPPYPA
Sbjct: 30  PPIVVSLHDAMGKVLAQDIRASDPLPPYPA 59

Query: 71   101
           
Sbjct: 90   59

[Close]

BLAST of MU65878 vs. TAIR10
Match: AT5G20990.1 (AT5G20990.1 molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1))

HSP 1 Score: 52.4 bits (124), Expect = 7.6e-08
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 2


Query: 11  PLIVVSLHDAIGKVLAQDIRASDPLPPYPA 70
           P ++VSL++A+GKVLA+DIRA DPLPPYPA
Sbjct: 34  PPVIVSLYEALGKVLAEDIRAPDPLPPYPA 63

Query: 71   101
           
Sbjct: 94   63

[Close]

BLAST of MU65878 vs. NCBI nr
Match: gi|659100319|ref|XP_008451034.1| (PREDICTED: molybdopterin biosynthesis protein CNX1 [Cucumis melo])

HSP 1 Score: 60.8 bits (146), Expect = 6.1e-07
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 2


Query: 11  PLIVVSLHDAIGKVLAQDIRASDPLPPYPA 70
           P IVVSLHDAIGKVLAQDIRASDPLPPYPA
Sbjct: 30  PPIVVSLHDAIGKVLAQDIRASDPLPPYPA 59

Query: 71   101
           
Sbjct: 90   59

[Close]

BLAST of MU65878 vs. NCBI nr
Match: gi|700211286|gb|KGN66382.1| (hypothetical protein Csa_1G600220 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-06
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2


Query: 11  PLIVVSLHDAIGKVLAQDIRASDPLPPYPA 70
           P IVVSLHDA+GKVLAQDIRASDPLPPYPA
Sbjct: 30  PPIVVSLHDAMGKVLAQDIRASDPLPPYPA 59

Query: 71   101
           
Sbjct: 90   59

[Close]

BLAST of MU65878 vs. NCBI nr
Match: gi|778663355|ref|XP_011660066.1| (PREDICTED: molybdopterin biosynthesis protein CNX1 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-06
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2


Query: 11  PLIVVSLHDAIGKVLAQDIRASDPLPPYPA 70
           P IVVSLHDA+GKVLAQDIRASDPLPPYPA
Sbjct: 30  PPIVVSLHDAMGKVLAQDIRASDPLPPYPA 59

Query: 71   101
           
Sbjct: 90   59

The following BLAST results are available for this feature:

BLAST of MU65878 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CNX1_ARATH	1.4e-06	73.33	Molybdopterin biosynthesis protein CNX1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=...	[more]

BLAST of MU65878 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZS5_CUCSA	9.4e-07	93.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600220 PE=4 SV=1	[more]

BLAST of MU65878 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20990.1	7.6e-08	73.33	molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosyn...	[more]

BLAST of MU65878 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100319\|ref\|XP_008451034.1\|	6.1e-07	96.67	PREDICTED: molybdopterin biosynthesis protein CNX1 [Cucumis melo]	[more]
gi\|700211286\|gb\|KGN66382.1\|	1.4e-06	93.33	hypothetical protein Csa_1G600220 [Cucumis sativus]	[more]
gi\|778663355\|ref\|XP_011660066.1\|	1.4e-06	93.33	PREDICTED: molybdopterin biosynthesis protein CNX1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR005110	MoeA_linker/N

Vocabulary: **Biological Process**
Term	Definition
GO:0032324	molybdopterin cofactor biosynthetic process

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032324	molybdopterin cofactor biosynthetic process

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C015599	MELO3C015599	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
TEa0004P02	TEa0004P02	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005110	MoeA, N-terminal and linker domain	unknown	SSF63882	MoeA N-terminal region -like	coord: 6..33 score: 8.