MU65868 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU65868
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUnknown protein
Locationchr6 : 4224561 .. 4224986 (-)
Sequence length425
The following sequences are available for this feature:

transcribed_cluster sequence

AAATTTTCATTTCTTCTCCTCCGATCTCTCATTCTTGAAATGGGTATTTCATGGAGTAACAGAAGAAGAAACAACTACCTTCAGAACCCACCTCCACCTCCTCCTCCGCCCTACCTTTCTTCTTCCTCGTTCTATTACCCCCCTGAACCCCAATCTCTTTCTCCTGCTCCACCTCCGCCGCCACCGCCGCCCCCGCTTCAGACTCATCAGTTTACTAATTCTCACCCTCCCCCCCCGCACAGCCACCCTTACGGTTCAACTTCTCAGCCACTACCTCTGCCACCGATTCCTCATCCTCCTCCCCCTGCCCCTGCCCCTGCTCCTCACTCTTATTACTTCTCTGGTGGGTACAATTCGTGTAATTATGGGAATTCTTCGATGGGGCGTTTCAATTTTTACCCTTATTATGCTAATCAGAGTAATGG
Library categoryESTs
melon CM-TEa library1
BLAST of MU65868 vs. TrEMBL
Match: A0A0A0LAF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150050 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-19
Identity = 59/128 (46.09%), Postives = 59/128 (46.09%), Query Frame = 1

Query: 40  MGISWSNRRRNNYLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQFTN 99
           MGISWSNRRRNNYLQN                                      THQFTN
Sbjct: 1   MGISWSNRRRNNYLQNPPPPPPPPYLSSSSFYYPSEPQSLSPAPPPPPPPPPLQTHQFTN 60

Query: 100 XXXXXXXXXXYGSTSQXXXXXXXXXXXXXXXXXXXXSYYFSGGYNSCNYGNSSMGRFNFY 159
                     Y STSQ                    SYYFSGGYNSCNYGNSSMGRFNFY
Sbjct: 61  SHPPPPHSHPYSSTSQTLPLPPIPHPPPPAPAPH--SYYFSGGYNSCNYGNSSMGRFNFY 120

Query: 160 PYYANQSN 219
           PYYANQSN
Sbjct: 121 PYYANQSN 126

Query: 220 279
           
Sbjct: 181 126

Query: 280 339
           
Sbjct: 241 126

Query: 340 399
           
Sbjct: 301 126

Query: 400 424
           
Sbjct: 361 126

BLAST of MU65868 vs. NCBI nr
Match: gi|659076514|ref|XP_008438722.1| (PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Cucumis melo])

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-19
Identity = 60/128 (46.88%), Postives = 60/128 (46.88%), Query Frame = 1

Query: 40  MGISWSNRRRNNYLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQFTN 99
           MGISWSNRRRNNYLQN                                      THQFTN
Sbjct: 1   MGISWSNRRRNNYLQNPPPPPPPPYLSSSSFYYPPEPQSLSPAPPPPPPPPPLQTHQFTN 60

Query: 100 XXXXXXXXXXYGSTSQXXXXXXXXXXXXXXXXXXXXSYYFSGGYNSCNYGNSSMGRFNFY 159
                     YGSTSQ                    SYYFSGGYNSCNYGNSSMGRFNFY
Sbjct: 61  SHPPPPHSHPYGSTSQPLPLPPIPHPPPPAPAPAPHSYYFSGGYNSCNYGNSSMGRFNFY 120

Query: 160 PYYANQSN 219
           PYYANQSN
Sbjct: 121 PYYANQSN 128

Query: 220 279
           
Sbjct: 181 128

Query: 280 339
           
Sbjct: 241 128

Query: 340 399
           
Sbjct: 301 128

Query: 400 424
           
Sbjct: 361 128

BLAST of MU65868 vs. NCBI nr
Match: gi|778678585|ref|XP_011650992.1| (PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-17
Identity = 59/128 (46.09%), Postives = 59/128 (46.09%), Query Frame = 1

Query: 40  MGISWSNRRRNNYLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQFTN 99
           MGISWSNRRRNNYLQN                                      THQFTN
Sbjct: 1   MGISWSNRRRNNYLQNPPPPPPPPYLSSSSFYYPSEPQSLSPAPPPPPPPPPLQTHQFTN 60

Query: 100 XXXXXXXXXXYGSTSQXXXXXXXXXXXXXXXXXXXXSYYFSGGYNSCNYGNSSMGRFNFY 159
                     Y STSQ                    SYYFSGGYNSCNYGNSSMGRFNFY
Sbjct: 61  SHPPPPHSHPYSSTSQTLPLPPIPHPPPPAPAPH--SYYFSGGYNSCNYGNSSMGRFNFY 120

Query: 160 PYYANQSN 219
           PYYANQSN
Sbjct: 121 PYYANQSN 126

Query: 220 279
           
Sbjct: 181 126

Query: 280 339
           
Sbjct: 241 126

Query: 340 399
           
Sbjct: 301 126

Query: 400 424
           
Sbjct: 361 126

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LAF7_CUCSA2.6e-1946.09Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150050 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659076514|ref|XP_008438722.1|1.7e-1946.88PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Cucumis melo][more]
gi|778678585|ref|XP_011650992.1|1.6e-1746.09PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C006566MELO3C006566gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
TEa0004M23TEa0004M23EST