MU65285 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU65285
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Autophagy 9
Location	chr4 : 14299295 .. 14299858 (-)
Sequence length	561

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AACCCCAAACAATTTTCATGGATCCTCCTAATTTCAACAGGTACACTACTACCATGAAGAGTCAGTATGATAATGTCTCTGAACGAAGCTTGGAGGAGCAACAACACATGGAATGGAGTGATTTTGGAAAGTTATCTCGACCCACCTACCTAGAAGACATAGAGACTGGAGAGTTGGATCTTCATTTTGGAGATGTGTACAGCAGAACTCCAGAAACTCCTAAACCCGAACCTACAAGCTTTGAGTAATTGCTTGTACTTTTATGTGGAAGCTTTCACTTTACAACTAGGGATGGATGTTGATTTTCTGGGTTCTTTTATGTTTTCTGTCAAATTTATAGATCCTTAAATTCTTTTTCTGTACATAAATTCATCAAACAAAAATATTCTTCATAGGCTTCTGTTTGGTTTGAAGCCTATTGAAAACCGTGGGAAGGTGTAAGTAATGGCACATTCAAGTTATTAATGACACCCAAATTCATTCTTCCATCATATCCTAAGCTTCTGTTTAGAGATGGAAGCACCATTTTTCTTCTTTTAAGAAAATAAATTTCATTTATGT

Library


Library category	ESTs
melon PSI library	1

Homology

[Close]

BLAST of MU65285 vs. TrEMBL
Match: A0A0A0LAE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G393920 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-39
Identity = 79/81 (97.53%), Postives = 79/81 (97.53%), Query Frame = 3


Query: 3   PQTIFMDPPNFNRYTTTMKSQYDNVSERSLEEQQHMEWSDFGKLSRPTYLEDIETGELDL 62
           PQT FMDPPNFNRYTTTMKSQYDNVSERS EEQQHMEWSDFGKLSRPTYLEDIETGELDL
Sbjct: 793 PQTSFMDPPNFNRYTTTMKSQYDNVSERSSEEQQHMEWSDFGKLSRPTYLEDIETGELDL 852

Query: 63  HFGDVYSRTPETPKPEPTSFE 122
           HFGDVYSRTPETPKPEPTSFE
Sbjct: 853 HFGDVYSRTPETPKPEPTSFE 873

Query: 123  182
           
Sbjct: 913  873

Query: 183  242
           
Sbjct: 973  873

Query: 243  246
           
Sbjct: 1033  873

[Close]

BLAST of MU65285 vs. TrEMBL
Match: A0A067K2R5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17708 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-15
Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = 3


Query: 3   PQTIFMDPPNFNRYTTTMKSQYDNVSERSLEEQQ-HMEWSDFGKLSRPTYL-EDIETGEL 62
           PQT FM+PP+FNR+T+   + YDN+S+RSLEEQ+ H  W    +LSR  Y+ +D+E GE+
Sbjct: 783 PQTSFMEPPDFNRFTSD--NYYDNISDRSLEEQENHFSWGIANRLSRTAYMHDDLEVGEV 842

Query: 63  DLHFGDVYSRTPETPKP--EPTSF 122
           +LHF D+YSR PETP    EP SF
Sbjct: 843 NLHFDDIYSRPPETPTEYREPPSF 864

Query: 123  182
           
Sbjct: 903  864

Query: 183  242
           
Sbjct: 963  864

[Close]

BLAST of MU65285 vs. TrEMBL
Match: A0A0D2RUV2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G072800 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-14
Identity = 43/76 (56.58%), Postives = 60/76 (78.95%), Query Frame = 3


Query: 3   PQTIFMDPPNFNRYTTTMKSQYDNVSERSLEEQ-QHMEWSDFGKLSRPTYLED-IETG-E 62
           PQT F++PP+FNRY++  +  YDN+SERS+EEQ Q ++W D  +LSR TY+ED +ETG +
Sbjct: 825 PQTSFLEPPDFNRYSSAQR--YDNMSERSVEEQDQSLDWRDSQRLSRTTYMEDDLETGGD 884

Query: 63  LDLHFGDVYSRTPETP 122
           ++LHF D+YSR PE P
Sbjct: 885 INLHFDDIYSRPPEAP 898

Query: 123  182
           
Sbjct: 945  898

Query: 183  222
           
Sbjct: 1005  898

[Close]

BLAST of MU65285 vs. TrEMBL
Match: A0A0D2MUW1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G072800 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-14
Identity = 43/76 (56.58%), Postives = 60/76 (78.95%), Query Frame = 3


Query: 3   PQTIFMDPPNFNRYTTTMKSQYDNVSERSLEEQ-QHMEWSDFGKLSRPTYLED-IETG-E 62
           PQT F++PP+FNRY++  +  YDN+SERS+EEQ Q ++W D  +LSR TY+ED +ETG +
Sbjct: 723 PQTSFLEPPDFNRYSSAQR--YDNMSERSVEEQDQSLDWRDSQRLSRTTYMEDDLETGGD 782

Query: 63  LDLHFGDVYSRTPETP 122
           ++LHF D+YSR PE P
Sbjct: 783 INLHFDDIYSRPPEAP 796

Query: 123  182
           
Sbjct: 843  796

Query: 183  222
           
Sbjct: 903  796

[Close]

BLAST of MU65285 vs. TrEMBL
Match: A0A0D2R0I9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G072800 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-14
Identity = 43/76 (56.58%), Postives = 60/76 (78.95%), Query Frame = 3


Query: 3   PQTIFMDPPNFNRYTTTMKSQYDNVSERSLEEQ-QHMEWSDFGKLSRPTYLED-IETG-E 62
           PQT F++PP+FNRY++  +  YDN+SERS+EEQ Q ++W D  +LSR TY+ED +ETG +
Sbjct: 739 PQTSFLEPPDFNRYSSAQR--YDNMSERSVEEQDQSLDWRDSQRLSRTTYMEDDLETGGD 798

Query: 63  LDLHFGDVYSRTPETP 122
           ++LHF D+YSR PE P
Sbjct: 799 INLHFDDIYSRPPEAP 812

Query: 123  182
           
Sbjct: 859  812

Query: 183  222
           
Sbjct: 919  812

[Close]

BLAST of MU65285 vs. NCBI nr
Match: gi|659093243|ref|XP_008447441.1| (PREDICTED: autophagy-related protein 9 isoform X2 [Cucumis melo])

HSP 1 Score: 172.6 bits (436), Expect = 6.7e-40
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 3


Query: 3   PQTIFMDPPNFNRYTTTMKSQYDNVSERSLEEQQHMEWSDFGKLSRPTYLEDIETGELDL 62
           PQT FMDPPNFNRYTTTMKSQYDNVSERSLEEQQHMEWSDFGKLSRPTYLEDIETGELDL
Sbjct: 792 PQTSFMDPPNFNRYTTTMKSQYDNVSERSLEEQQHMEWSDFGKLSRPTYLEDIETGELDL 851

Query: 63  HFGDVYSRTPETPKPEPTSFE 122
           HFGDVYSRTPETPKPEPTSFE
Sbjct: 852 HFGDVYSRTPETPKPEPTSFE 872

Query: 123  182
           
Sbjct: 912  872

Query: 183  242
           
Sbjct: 972  872

Query: 243  246
           
Sbjct: 1032  872

[Close]

BLAST of MU65285 vs. NCBI nr
Match: gi|659093241|ref|XP_008447440.1| (PREDICTED: autophagy-related protein 9 isoform X1 [Cucumis melo])

HSP 1 Score: 172.6 bits (436), Expect = 6.7e-40
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 3


Query: 3   PQTIFMDPPNFNRYTTTMKSQYDNVSERSLEEQQHMEWSDFGKLSRPTYLEDIETGELDL 62
           PQT FMDPPNFNRYTTTMKSQYDNVSERSLEEQQHMEWSDFGKLSRPTYLEDIETGELDL
Sbjct: 810 PQTSFMDPPNFNRYTTTMKSQYDNVSERSLEEQQHMEWSDFGKLSRPTYLEDIETGELDL 869

Query: 63  HFGDVYSRTPETPKPEPTSFE 122
           HFGDVYSRTPETPKPEPTSFE
Sbjct: 870 HFGDVYSRTPETPKPEPTSFE 890

Query: 123  182
           
Sbjct: 930  890

Query: 183  242
           
Sbjct: 990  890

Query: 243  246
           
Sbjct: 1050  890

[Close]

BLAST of MU65285 vs. NCBI nr
Match: gi|778681047|ref|XP_011651446.1| (PREDICTED: autophagy-related protein 9 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 3.3e-39
Identity = 79/81 (97.53%), Postives = 79/81 (97.53%), Query Frame = 3


Query: 3   PQTIFMDPPNFNRYTTTMKSQYDNVSERSLEEQQHMEWSDFGKLSRPTYLEDIETGELDL 62
           PQT FMDPPNFNRYTTTMKSQYDNVSERS EEQQHMEWSDFGKLSRPTYLEDIETGELDL
Sbjct: 793 PQTSFMDPPNFNRYTTTMKSQYDNVSERSSEEQQHMEWSDFGKLSRPTYLEDIETGELDL 852

Query: 63  HFGDVYSRTPETPKPEPTSFE 122
           HFGDVYSRTPETPKPEPTSFE
Sbjct: 853 HFGDVYSRTPETPKPEPTSFE 873

Query: 123  182
           
Sbjct: 913  873

Query: 183  242
           
Sbjct: 973  873

Query: 243  246
           
Sbjct: 1033  873

[Close]

BLAST of MU65285 vs. NCBI nr
Match: gi|1009147573|ref|XP_015891483.1| (PREDICTED: autophagy-related protein 9 [Ziziphus jujuba])

HSP 1 Score: 93.6 bits (231), Expect = 3.9e-16
Identity = 45/83 (54.22%), Postives = 60/83 (72.29%), Query Frame = 3


Query: 3   PQTIFMDPPNFNRYTTTMKSQYDNVSERSLEEQQHMEWSDFGKLSRPTYLEDIETGELDL 62
           PQ  F++PP+FNR+     + Y+N S+RSLEE+Q ++W +  KLS+ TY +DIE+GE +L
Sbjct: 785 PQASFLEPPDFNRHAAA-DNYYENYSDRSLEEEQQLDWRNSRKLSQTTYFDDIESGEFNL 844

Query: 63  HFGDVYSRTPETPK--PEPTSFE 122
           HF DVYSR PET K  PE  SFE
Sbjct: 845 HFDDVYSRPPETSKINPEHPSFE 866

Query: 123  182
           
Sbjct: 905  866

Query: 183  242
           
Sbjct: 965  866

Query: 243  246
           
Sbjct: 1025  866

[Close]

BLAST of MU65285 vs. NCBI nr
Match: gi|802718349|ref|XP_012085334.1| (PREDICTED: autophagy-related protein 9 [Jatropha curcas])

HSP 1 Score: 90.9 bits (224), Expect = 2.5e-15
Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = 3


Query: 3   PQTIFMDPPNFNRYTTTMKSQYDNVSERSLEEQQ-HMEWSDFGKLSRPTYL-EDIETGEL 62
           PQT FM+PP+FNR+T+   + YDN+S+RSLEEQ+ H  W    +LSR  Y+ +D+E GE+
Sbjct: 783 PQTSFMEPPDFNRFTSD--NYYDNISDRSLEEQENHFSWGIANRLSRTAYMHDDLEVGEV 842

Query: 63  DLHFGDVYSRTPETPKP--EPTSF 122
           +LHF D+YSR PETP    EP SF
Sbjct: 843 NLHFDDIYSRPPETPTEYREPPSF 864

Query: 123  182
           
Sbjct: 903  864

Query: 183  242
           
Sbjct: 963  864

The following BLAST results are available for this feature:

BLAST of MU65285 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAE0_CUCSA	2.3e-39	97.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G393920 PE=4 SV=1	[more]
A0A067K2R5_JATCU	1.4e-15	54.76	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17708 PE=4 SV=1	[more]
A0A0D2RUV2_GOSRA	2.0e-14	56.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G072800 PE=4 SV=1	[more]
A0A0D2MUW1_GOSRA	2.0e-14	56.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G072800 PE=4 SV=1	[more]
A0A0D2R0I9_GOSRA	2.0e-14	56.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G072800 PE=4 SV=1	[more]

BLAST of MU65285 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659093243\|ref\|XP_008447441.1\|	6.7e-40	98.77	PREDICTED: autophagy-related protein 9 isoform X2 [Cucumis melo]	[more]
gi\|659093241\|ref\|XP_008447440.1\|	6.7e-40	98.77	PREDICTED: autophagy-related protein 9 isoform X1 [Cucumis melo]	[more]
gi\|778681047\|ref\|XP_011651446.1\|	3.3e-39	97.53	PREDICTED: autophagy-related protein 9 [Cucumis sativus]	[more]
gi\|1009147573\|ref\|XP_015891483.1\|	3.9e-16	54.22	PREDICTED: autophagy-related protein 9 [Ziziphus jujuba]	[more]
gi\|802718349\|ref\|XP_012085334.1\|	2.5e-15	54.76	PREDICTED: autophagy-related protein 9 [Jatropha curcas]	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C012904	MELO3C012904	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
PSI29E10	PSI29E10	EST