MU64932 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU64932
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Cysteine proteinase inhibitor
Location	chr8 : 14465582 .. 14466095 (+)
Sequence length	513

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AAAACCATTGTTGTCAACTTTCAATTTCTCAAGCTTCAAACGATTGCCAAACAAAACTTAAAATGAGTAATATGTTAGTGTCTCCTCAAGAAGCTAATTTGTTGGTTCAAAATCACAAAAATAGTGAATGGAAAGCAATAGAAGACACAAAGGACCCTTACATTGAAGACATGGGACGGTTTTCGGTGGCAAAGTTTACAATAAATCAAGACATCGAAGAAATGGCGACGTTCATTCTAGTGGTGAGCAGTGAGTATCTAGTGGTGAATGAAGGAACTATGTATCGAATTGTGGTAGAGATTAGGAAAGAGAATGTAAGTCAATCACGTGAGTTATATGTGGCTAAGGTATTAGATCATAAGCATCCTTTCAATTCTTGGACACTCTTATCTTTTGAATGCTCTACCCTTTTAGCTTTGCCTTCAAGCTTGGCTCTTTAGGGAATCCTCCCATTTGGTTCATTATCTCTATCCTTTTTAATATGCGTCAATAAAATAACAGACTTTTATCTCT

Library


Library category	ESTs
melon PSI library	1

Homology

The following BLAST results are available for this feature:

BLAST of MU64932 vs. NCBI nr


Match Name	E-value	Identity	Description

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C026868	MELO3C026868	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
PSI11D11	PSI11D11	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.450.10		coord: 23..113 score: 2.
None	No IPR available	unknown	SSF54403	Cystatin/monellin	coord: 20..113 score: 5.5