MU64469 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU64469
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Sec1-like protein
Location	chr10 : 15808555 .. 15809128 (+)
Sequence length	573

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AAGGAAGCCATTGTTTTCATGATTGGAGGGGGTAACTATGTCGAGTACGGGAGCTTGCAAGAACTGTCAATGAATCAGCAGCCAGTCAAGCATATAATATACGGTAGCACCGAAATTCTCACCGGAGTTGAGTTTGTGGAGCAGCTTTCGCTTTTGGGGCAGAAGATGGGATTTGGCAATGTGGCTGCTCCTCCTCCTCCTCCAGGTCGTTAACTGAACCCCTTTCTGTAAAATTTCTTTGTCCACTGCAGTGCCTAGGATTGGCTAATTCATTAAAGAAATTGGTGCAAATCTGCACAAGAATATCTTGGGTTATAGAATCTACCCACCTCAGTTGTTTTCAAGGCAACTTTCATGTTCTTAAAATCAGACTCTTGATTGACCTCAACCTTCGATAATCTGGGAAGAATGCCTTCGTTGTAGATGTTAGTTTGTCCATTTAATAACTTTTTGTATTCTTTAGAGTTTTATGTATTTGGAAATTCCTTTGCCAAACATTCTTTTGTCAAAGCTTGTCCTAAATTTCTTTGTTAAATGATATCTACAAAGATTATTATATGTGTAATTGTAGGT

Library


Library category	ESTs
melon PS library	1

Homology

[Close]

BLAST of MU64469 vs. Swiss-Prot
Match: SLY1_ARATH (SEC1 family transport protein SLY1 OS=Arabidopsis thaliana GN=SLY1 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17
Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFG 60
           +EAIVFMIGGGNYVEYGSLQEL+  Q  VK++IYG+TEIL G E VEQL LLG+KMG G
Sbjct: 557 REAIVFMIGGGNYVEYGSLQELTQRQLTVKNVIYGATEILNGGELVEQLGLLGKKMGLG 615

Query: 61   120
           
Sbjct: 617  615

Query: 121  178
           
Sbjct: 677  615

[Close]

BLAST of MU64469 vs. Swiss-Prot
Match: SLY1_ORYSJ (SEC1 family transport protein SLY1 OS=Oryza sativa subsp. japonica GN=SLY1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.4e-16
Identity = 41/61 (67.21%), Postives = 46/61 (75.41%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 60
           +EAIVFMIGGGNY+EY SL EL+   Q  K +IYG+TEIL GVEF++QLS LGQK G G 
Sbjct: 556 REAIVFMIGGGNYIEYRSLTELTQRSQTTKQVIYGATEILNGVEFIQQLSELGQKAGLGG 615

Query: 61  V 120
           V
Sbjct: 616 V 616

Query: 121  180
           
Sbjct: 676  616

Query: 181  184
           
Sbjct: 736  616

[Close]

BLAST of MU64469 vs. Swiss-Prot
Match: SCFD1_RAT (Sec1 family domain-containing protein 1 OS=Rattus norvegicus GN=Scfd1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 8.1e-09
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQK 60
           +EAIVF++GGGNY+EY +L +    +Q  KHI+YG +EI    +F++QLS LGQK
Sbjct: 584 QEAIVFVVGGGNYIEYQNLVDYIKGKQG-KHILYGCSEIFNATQFIKQLSQLGQK 637

Query: 61   120
           
Sbjct: 644  637

Query: 121  166
           
Sbjct: 704  637

[Close]

BLAST of MU64469 vs. Swiss-Prot
Match: SLY1_SCHPO (Protein sly1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sly1 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08
Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 1


Query: 4   EAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLL 63
           EAIV ++GGGNY+EYG+L + +  Q P K IIYGST+IL+  EF+E+++ L
Sbjct: 588 EAIVCVLGGGNYLEYGNLADWAREQNPKKRIIYGSTDILSPSEFMEEMASL 638

Query: 64   123
           
Sbjct: 648  638

Query: 124  157
           
Sbjct: 708  638

[Close]

BLAST of MU64469 vs. Swiss-Prot
Match: SCFD1_HUMAN (Sec1 family domain-containing protein 1 OS=Homo sapiens GN=SCFD1 PE=1 SV=4)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-08
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQK 60
           +EAIVF++GGGNY+EY +L +    +Q  KHI+YG +E+    +F++QLS LGQK
Sbjct: 589 QEAIVFVVGGGNYIEYQNLVDYIKGKQG-KHILYGCSELFNATQFIKQLSQLGQK 642

Query: 61   120
           
Sbjct: 649  642

Query: 121  166
           
Sbjct: 709  642

[Close]

BLAST of MU64469 vs. TrEMBL
Match: A0A0A0KSS4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G265810 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-25
Identity = 62/70 (88.57%), Postives = 63/70 (90.00%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 60
           KEAIVFMIGGGNYVEYGSLQELSMNQQP+KHIIYGSTEILTGVEFVEQLSLLGQKMGFGN
Sbjct: 555 KEAIVFMIGGGNYVEYGSLQELSMNQQPIKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 614

Query: 61  VXXXXXXXGR 120
           V       GR
Sbjct: 615 VAAPPPPPGR 624

Query: 121  180
           
Sbjct: 675  624

Query: 181  211
           
Sbjct: 735  624

[Close]

BLAST of MU64469 vs. TrEMBL
Match: A0A151RZJ2_CAJCA (SEC1 family transport protein SLY1 OS=Cajanus cajan GN=KK1_030401 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21
Identity = 53/61 (86.89%), Postives = 58/61 (95.08%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 60
           KEAIVFMIGGGNYVEYGSLQEL+ +QQP KHIIYG+TEILTGV+FVEQL+LLGQKMG GN
Sbjct: 555 KEAIVFMIGGGNYVEYGSLQELAQHQQPAKHIIYGTTEILTGVDFVEQLTLLGQKMGLGN 614

Query: 61  V 120
           V
Sbjct: 615 V 615

Query: 121  180
           
Sbjct: 675  615

Query: 181  184
           
Sbjct: 735  615

[Close]

BLAST of MU64469 vs. TrEMBL
Match: F6I0W3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03110 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.9e-21
Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 60
           KEAIVFMIGGGNYVEYGSLQEL++ QQPVKH+IYG+TEILTG EFVEQLSLLGQKMG G+
Sbjct: 528 KEAIVFMIGGGNYVEYGSLQELALRQQPVKHVIYGTTEILTGAEFVEQLSLLGQKMGLGS 587

Query: 61   120
           
Sbjct: 588  587

Query: 121  180
           
Sbjct: 648  587

[Close]

BLAST of MU64469 vs. TrEMBL
Match: W9S8Q4_9ROSA (SEC1 family transport protein OS=Morus notabilis GN=L484_006590 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFG 60
           KEAIVFMIGGGNYVEYGSLQEL   QQP+KH+IYG+TEILTGVEFVEQLSLLGQKMG G
Sbjct: 552 KEAIVFMIGGGNYVEYGSLQELVQRQQPLKHVIYGTTEILTGVEFVEQLSLLGQKMGLG 610

Query: 61   120
           
Sbjct: 612  610

Query: 121  178
           
Sbjct: 672  610

[Close]

BLAST of MU64469 vs. TrEMBL
Match: A0A059BEU5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G01854 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 51/61 (83.61%), Postives = 58/61 (95.08%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 60
           KEAIVFMIGGGNYVEYGSLQEL+  QQPVKH+IYG+TEILTGVEFVEQL++LG+KMG G+
Sbjct: 556 KEAIVFMIGGGNYVEYGSLQELAKRQQPVKHVIYGTTEILTGVEFVEQLTVLGKKMGLGS 615

Query: 61  V 120
           V
Sbjct: 616 V 616

Query: 121  180
           
Sbjct: 676  616

Query: 181  184
           
Sbjct: 736  616

[Close]

BLAST of MU64469 vs. TAIR10
Match: AT2G17980.1 (AT2G17980.1 Sec1/munc18-like (SM) proteins superfamily)

HSP 1 Score: 90.9 bits (224), Expect = 9.2e-19
Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFG 60
           +EAIVFMIGGGNYVEYGSLQEL+  Q  VK++IYG+TEIL G E VEQL LLG+KMG G
Sbjct: 557 REAIVFMIGGGNYVEYGSLQELTQRQLTVKNVIYGATEILNGGELVEQLGLLGKKMGLG 615

Query: 61   120
           
Sbjct: 617  615

Query: 121  178
           
Sbjct: 677  615

[Close]

BLAST of MU64469 vs. TAIR10
Match: AT4G31740.1 (AT4G31740.1 Sec1/munc18-like (SM) proteins superfamily)

HSP 1 Score: 88.2 bits (217), Expect = 6.0e-18
Identity = 43/57 (75.44%), Postives = 46/57 (80.70%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMG 60
           +EAIVFMIGGGNY+EY SLQELS  Q+ V +IIYG+TEILTG E VEQL  LGQKMG
Sbjct: 113 EEAIVFMIGGGNYIEYSSLQELSQRQEMVNNIIYGATEILTGTELVEQLGELGQKMG 169

Query: 61   120
           
Sbjct: 173  169

Query: 121  172
           
Sbjct: 233  169

[Close]

BLAST of MU64469 vs. NCBI nr
Match: gi|659120511|ref|XP_008460227.1| (PREDICTED: SEC1 family transport protein SLY1 [Cucumis melo])

HSP 1 Score: 127.1 bits (318), Expect = 3.3e-26
Identity = 63/70 (90.00%), Postives = 63/70 (90.00%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 60
           KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN
Sbjct: 555 KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 614

Query: 61  VXXXXXXXGR 120
           V       GR
Sbjct: 615 VAAPPPPPGR 624

Query: 121  180
           
Sbjct: 675  624

Query: 181  211
           
Sbjct: 735  624

[Close]

BLAST of MU64469 vs. NCBI nr
Match: gi|449445286|ref|XP_004140404.1| (PREDICTED: SEC1 family transport protein SLY1-like [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 4.3e-26
Identity = 62/70 (88.57%), Postives = 63/70 (90.00%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 60
           KEAIVFMIGGGNYVEYGSLQELSMNQQP+KHIIYGSTEILTGVEFVEQLSLLGQKMGFGN
Sbjct: 555 KEAIVFMIGGGNYVEYGSLQELSMNQQPIKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 614

Query: 61  VXXXXXXXGR 120
           V       GR
Sbjct: 615 VAAPPPPPGR 624

Query: 121  180
           
Sbjct: 675  624

Query: 181  211
           
Sbjct: 735  624

[Close]

BLAST of MU64469 vs. NCBI nr
Match: gi|1012336619|gb|KYP47914.1| (SEC1 family transport protein SLY1 [Cajanus cajan])

HSP 1 Score: 112.8 bits (281), Expect = 6.4e-22
Identity = 53/61 (86.89%), Postives = 58/61 (95.08%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 60
           KEAIVFMIGGGNYVEYGSLQEL+ +QQP KHIIYG+TEILTGV+FVEQL+LLGQKMG GN
Sbjct: 555 KEAIVFMIGGGNYVEYGSLQELAQHQQPAKHIIYGTTEILTGVDFVEQLTLLGQKMGLGN 614

Query: 61  V 120
           V
Sbjct: 615 V 615

Query: 121  180
           
Sbjct: 675  615

Query: 181  184
           
Sbjct: 735  615

[Close]

BLAST of MU64469 vs. NCBI nr
Match: gi|297744543|emb|CBI37805.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21
Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 60
           KEAIVFMIGGGNYVEYGSLQEL++ QQPVKH+IYG+TEILTG EFVEQLSLLGQKMG G+
Sbjct: 488 KEAIVFMIGGGNYVEYGSLQELALRQQPVKHVIYGTTEILTGAEFVEQLSLLGQKMGLGS 547

Query: 61   120
           
Sbjct: 548  547

Query: 121  180
           
Sbjct: 608  547

[Close]

BLAST of MU64469 vs. NCBI nr
Match: gi|225428141|ref|XP_002278576.1| (PREDICTED: SEC1 family transport protein SLY1 [Vitis vinifera])

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21
Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 1


Query: 1   KEAIVFMIGGGNYVEYGSLQELSMNQQPVKHIIYGSTEILTGVEFVEQLSLLGQKMGFGN 60
           KEAIVFMIGGGNYVEYGSLQEL++ QQPVKH+IYG+TEILTG EFVEQLSLLGQKMG G+
Sbjct: 551 KEAIVFMIGGGNYVEYGSLQELALRQQPVKHVIYGTTEILTGAEFVEQLSLLGQKMGLGS 610

Query: 61   120
           
Sbjct: 611  610

Query: 121  180
           
Sbjct: 671  610

The following BLAST results are available for this feature:

BLAST of MU64469 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SLY1_ARATH	1.6e-17	74.58	SEC1 family transport protein SLY1 OS=Arabidopsis thaliana GN=SLY1 PE=1 SV=1	[more]
SLY1_ORYSJ	2.4e-16	67.21	SEC1 family transport protein SLY1 OS=Oryza sativa subsp. japonica GN=SLY1 PE=2 ...	[more]
SCFD1_RAT	8.1e-09	52.73	Sec1 family domain-containing protein 1 OS=Rattus norvegicus GN=Scfd1 PE=1 SV=1	[more]
SLY1_SCHPO	1.1e-08	54.90	Protein sly1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sly1 PE=3...	[more]
SCFD1_HUMAN	1.4e-08	50.91	Sec1 family domain-containing protein 1 OS=Homo sapiens GN=SCFD1 PE=1 SV=4	[more]

BLAST of MU64469 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSS4_CUCSA	1.1e-25	88.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G265810 PE=3 SV=1	[more]
A0A151RZJ2_CAJCA	1.3e-21	86.89	SEC1 family transport protein SLY1 OS=Cajanus cajan GN=KK1_030401 PE=3 SV=1	[more]
F6I0W3_VITVI	2.9e-21	86.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03110 PE=3 SV=...	[more]
W9S8Q4_9ROSA	1.1e-20	88.14	SEC1 family transport protein OS=Morus notabilis GN=L484_006590 PE=3 SV=1	[more]
A0A059BEU5_EUCGR	1.1e-20	83.61	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G01854 PE=3 SV=1	[more]

BLAST of MU64469 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17980.1	9.2e-19	74.58	Sec1/munc18-like (SM) proteins superfamily	[more]
AT4G31740.1	6.0e-18	75.44	Sec1/munc18-like (SM) proteins superfamily	[more]

BLAST of MU64469 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120511\|ref\|XP_008460227.1\|	3.3e-26	90.00	PREDICTED: SEC1 family transport protein SLY1 [Cucumis melo]	[more]
gi\|449445286\|ref\|XP_004140404.1\|	4.3e-26	88.57	PREDICTED: SEC1 family transport protein SLY1-like [Cucumis sativus]	[more]
gi\|1012336619\|gb\|KYP47914.1\|	6.4e-22	86.89	SEC1 family transport protein SLY1 [Cajanus cajan]	[more]
gi\|297744543\|emb\|CBI37805.3\|	1.4e-21	86.67	unnamed protein product [Vitis vinifera]	[more]
gi\|225428141\|ref\|XP_002278576.1\|	1.4e-21	86.67	PREDICTED: SEC1 family transport protein SLY1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001619	Sec1-like
IPR027482	Sec-1-like_dom2

Vocabulary: **Biological Process**
Term	Definition
GO:0006904	vesicle docking involved in exocytosis
GO:0016192	vesicle-mediated transport

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006904	vesicle docking involved in exocytosis
biological_process	GO:0016192	vesicle-mediated transport

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C022592	MELO3C022592	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
PS24D03	PS24D03	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001619	Sec1-like protein	PANTHER	PTHR11679	VESICLE PROTEIN SORTING-ASSOCIATED	coord: 1..58 score: 1.1
IPR001619	Sec1-like protein	PFAM	PF00995	Sec1	coord: 2..48 score: 3.1
IPR001619	Sec1-like protein	unknown	SSF56815	Sec1/munc18-like (SM) proteins	coord: 2..55 score: 6.54
IPR027482	Sec1-like, domain 2	GENE3D	G3DSA:3.40.50.1910		coord: 1..57 score: 2.4
None	No IPR available	PANTHER	PTHR11679:SF2	SEC1 FAMILY DOMAIN-CONTAINING PROTEIN 1	coord: 1..58 score: 1.1