MU64145 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU64145
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNuclear fusion defective 6 isoform 1
Locationchr11 : 12153500 .. 12156142 (+)
Sequence length682
The following sequences are available for this feature:

transcribed_cluster sequence

ATTTTCCGAAACCAAGAAGAACAACCTTCAGAATCTATCATTTCTTCTCATAATCAATGGCTTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCCCCCTTTCGCATGGCAACTAACAAACCCTTCTCTCATTGTACTTTCAGGTGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCTCCTCAGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTCCCCGAAGGTAGCTAGCACACTTTATAGGCCCATTGATACTTGCCTTCTTGTTGCTCTGCATGCATTGACGATCTATGATAAATGACAAGAGGATCTATACGGACAGTGACTTCTATTAAGTAGAAGCTTCCATGCTCCAAATGGTGGTTTGTGAAGAAGACCTTCCGATCAATGGCAATGGATTATTGTTATTTGAAGACTGATTTAGTTTTAATTTTTAGTGTTGATTCTCTATTTCATACTCGTTGATTGTTAACAGTTGTATCTGATCATGTTAATTTTTTCATTGAATATTCATCCAGCAATTGACAACTTCATCTCCTTACAAAAATTGGGTTTGTATTTTGTAGCAACTTCGACATA
Library categoryESTs
melon PS library1
BLAST of MU64145 vs. TrEMBL
Match: A0A0A0LT36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408420 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.7e-16
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 3

Query: 123 HIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVS 182
           HIGSQPKPS +SPFRMATNKP SH TFRCAP MSFCLESMMPFHSVS
Sbjct: 23  HIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVS 69

Query: 183 242
           
Sbjct: 83  69

Query: 243 264
           
Sbjct: 143 69

BLAST of MU64145 vs. TrEMBL
Match: A0A0A0LT36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408420 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.5e-03
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2

Query: 263 SSALMTSMLSISRHSCGWLPEGS 322
           SSALMTSMLSISRHSCGWLPEG+
Sbjct: 70  SSALMTSMLSISRHSCGWLPEGA 92

Query: 323 332
           
Sbjct: 130 92


HSP 2 Score: 90.9 bits (224), Expect = 2.2e-15
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 3

Query: 123 HIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVS 182
           HIGSQPK SS+SPFRMATNKP SH TFRCAP MSFCLESMMPFHSVS
Sbjct: 23  HIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVS 69

Query: 183 242
           
Sbjct: 83  69

Query: 243 264
           
Sbjct: 143 69

BLAST of MU64145 vs. TrEMBL
Match: A0A0A0LN06_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408390 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.5e-03
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2

Query: 263 SSALMTSMLSISRHSCGWLPEGS 322
           SSALMTSMLSISRHSCGWLPEG+
Sbjct: 70  SSALMTSMLSISRHSCGWLPEGA 92

Query: 323 332
           
Sbjct: 130 92


HSP 2 Score: 90.9 bits (224), Expect = 2.2e-15
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 3

Query: 123 HIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVS 182
           HIGSQPK SS+SPFRMATNKP SH TFRCAP MSFCLESMMPFHSVS
Sbjct: 23  HIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVS 69

Query: 183 242
           
Sbjct: 83  69

Query: 243 264
           
Sbjct: 143 69

BLAST of MU64145 vs. TrEMBL
Match: A0A0A0LMP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408410 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.6e-02
Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 2

Query: 263 SSALMTSMLSISRHSCGWLPE 322
           SSALMTSMLSISRHSCGWLPE
Sbjct: 70  SSALMTSMLSISRHSCGWLPE 90

Query: 323 326
           
Sbjct: 130 90

BLAST of MU64145 vs. NCBI nr
Match: gi|778673331|ref|XP_011649973.1| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 3.1e-15
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 3

Query: 123 HIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVS 182
           HIGSQPKPS +SPFRMATNKP SH TFRCAP MSFCLESMMPFHSVS
Sbjct: 23  HIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVS 69

Query: 183 242
           
Sbjct: 83  69

Query: 243 264
           
Sbjct: 143 69

BLAST of MU64145 vs. NCBI nr
Match: gi|700208077|gb|KGN63196.1| (hypothetical protein Csa_2G408420 [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 3.1e-15
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 3

Query: 123 HIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVS 182
           HIGSQPKPS +SPFRMATNKP SH TFRCAP MSFCLESMMPFHSVS
Sbjct: 23  HIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVS 69

Query: 183 242
           
Sbjct: 83  69

Query: 243 264
           
Sbjct: 143 69

BLAST of MU64145 vs. NCBI nr
Match: gi|778673327|ref|XP_011649972.1| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 3.1e-15
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 3

Query: 123 HIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVS 182
           HIGSQPKPS +SPFRMATNKP SH TFRCAP MSFCLESMMPFHSVS
Sbjct: 23  HIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVS 69

Query: 183 242
           
Sbjct: 83  69

Query: 243 264
           
Sbjct: 143 69

BLAST of MU64145 vs. NCBI nr
Match: gi|700208074|gb|KGN63193.1| (hypothetical protein Csa_2G408390 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 6.9e-15
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 3

Query: 123 HIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVS 182
           HIGSQPK SS+SPFRMATNKP SH TFRCAP MSFCLESMMPFHSVS
Sbjct: 23  HIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVS 69

Query: 183 242
           
Sbjct: 83  69

Query: 243 264
           
Sbjct: 143 69

BLAST of MU64145 vs. NCBI nr
Match: gi|778673340|ref|XP_011649974.1| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 6.9e-15
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 3

Query: 123 HIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVS 182
           HIGSQPK SS+SPFRMATNKP SH TFRCAP MSFCLESMMPFHSVS
Sbjct: 23  HIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVS 69

Query: 183 242
           
Sbjct: 83  69

Query: 243 264
           
Sbjct: 143 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LT36_CUCSA9.7e-1689.36Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408420 PE=4 SV=1[more]
A0A0A0LT36_CUCSA5.5e-0395.65Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408420 PE=4 SV=1[more]
A0A0A0LN06_CUCSA5.5e-0395.65Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408390 PE=4 SV=1[more]
A0A0A0LMP1_CUCSA3.6e-02100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408410 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778673331|ref|XP_011649973.1|3.1e-1589.36PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ... [more]
gi|700208077|gb|KGN63196.1|3.1e-1589.36hypothetical protein Csa_2G408420 [Cucumis sativus][more]
gi|778673327|ref|XP_011649972.1|3.1e-1589.36PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ... [more]
gi|700208074|gb|KGN63193.1|6.9e-1589.36hypothetical protein Csa_2G408390 [Cucumis sativus][more]
gi|778673340|ref|XP_011649974.1|6.9e-1589.36PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C019346MELO3C019346gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
PS05F06PS05F06EST