MU63286 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU63286
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Unknown protein
Location	chr8 : 23141665 .. 23142211 (-)
Sequence length	546

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AAACTTTTTGCTGAATTGTTACAGGGTGCACGTAGTAAGAACACTCTCCAAACCTCACAAAATAAGAAGTCCTCGGCAAGTCTAGCAAAATCAGGGTCCTTTCCTGCTCCTGGTTCAGCACAAAAAGGATACAAAAAACTTAGCTCACTCCTACACAAGCAGAGTGAGTCCTATCCAAAACAAAAATCTAATTCTCCCCACCCATCAGAGCTGGTTGAATCTGAATCTCCCAAGAATTTTCATGAAGATATGTCACCTCATGATTCTGATAGTACTTCACATAACATAAAACAACAAACAACCCCTTCTTCTTCAGGCTTGAATCGTGGGCTTAGGCGTGGAGGGTGGAATCAGTTGGTTGTCAAGCGTTTCAATTTTATTAAGCAGAAAATAAGGTGCTCACTCAAGGAGAGGAAGAGGGGAAATCACCAGNAAACATCTAAAGGAATACCAACCGTGCATTCCTCTGGACATGAACTTCCCCTTCACGGAGAAGAGGCTCGAGAAAGTATAGGAACTCCCACTAGTGAAAATGTCTCGGGCACT

Library


Library category	ESTs
melon CM-PEa library	1

Homology

[Close]

BLAST of MU63286 vs. TrEMBL
Match: A0A0A0L1J3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G598010 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 5.9e-64
Identity = 129/175 (73.71%), Postives = 135/175 (77.14%), Query Frame = 1


Query: 1   KLFAELLQGARSKNTLQTXXXXXXXXXXXXXXXFPAPGSAQKGYKKLSSLLHKQSESYPK 60
           KLFAELLQGA SKNTLQT               FPAP SAQKGY+KLSSL HKQSESYPK
Sbjct: 232 KLFAELLQGAHSKNTLQTSQNKKSSASLAKSGSFPAPSSAQKGYRKLSSLRHKQSESYPK 291

Query: 61  QKSNSPHPSELVESESPKNFHEDMSPHDSDSTSHNIKQQTTPXXXXXXXXXXXXXWNQLV 120
           QKSNSPHPS+LVES+SP+NFHEDM+P DSDSTSHNIK QTTP             WNQLV
Sbjct: 292 QKSNSPHPSKLVESKSPENFHEDMTPCDSDSTSHNIKHQTTPSSSGLNHGLRHGGWNQLV 351

Query: 121 VKRFNFIKQKIRCSLKERKRGNHQXTSKGIPTVHSSGHELPLHGEEARESIGTPT 180
           VKRFNFIKQKIR SLKERKRGNHQ TSKGIPTVHS GHELP H EEA+ES GT T
Sbjct: 352 VKRFNFIKQKIRGSLKERKRGNHQKTSKGIPTVHSPGHELPFHEEEAQESKGTAT 406

Query: 181  240
           
Sbjct: 412  406

Query: 241  300
           
Sbjct: 472  406

Query: 301  360
           
Sbjct: 532  406

Query: 361  420
           
Sbjct: 592  406

Query: 421  480
           
Sbjct: 652  406

Query: 481  526
           
Sbjct: 712  406

[Close]

BLAST of MU63286 vs. TrEMBL
Match: A0A0A0KFF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G190430 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.9e-47
Identity = 113/183 (61.75%), Postives = 125/183 (68.31%), Query Frame = 1


Query: 1   KLFAELLQGARSKNTLQTXXXXXXXXXXXXXXXFPAPGSAQKGYKKLSSLLHKQSESYPK 60
           KLFAELLQGA +KNT QT               FPAPG A+KGYKKLSSL HKQ E++PK
Sbjct: 220 KLFAELLQGAHNKNTQQTSQNKKSSASLAKSRSFPAPGLARKGYKKLSSLQHKQIEAFPK 279

Query: 61  -QKSNSPHPSELVESESPKNFHEDMSPHDSDSTS-HNIKQQTTPXXXXXXXXXXXXXWNQ 120
            QKS S  PS+LV S SPKNFHEDM P DS ST+ HNIK Q T              WNQ
Sbjct: 280 VQKSVSLQPSKLVGSASPKNFHEDMMPCDSVSTTNHNIKHQATSSLGSNRGQRHGG-WNQ 339

Query: 121 LVVKRFNFIKQKIRCSLKERKRGNHQXTSKGIPTVHSSGHELPLHGEEARESIGTPTSEN 180
           LVVKRFNFI+QKIR S KERK+GN+Q TSKGI     SGHEL L+GEEA ES+GT TSE+
Sbjct: 340 LVVKRFNFIRQKIRHSFKERKKGNNQKTSKGISARDPSGHELSLYGEEAHESLGTATSED 399

Query: 181 VSG 240
            SG
Sbjct: 400 GSG 401

Query: 241  300
           
Sbjct: 460  401

Query: 301  360
           
Sbjct: 520  401

Query: 361  420
           
Sbjct: 580  401

Query: 421  480
           
Sbjct: 640  401

Query: 481  540
           
Sbjct: 700  401

Query: 541  544
           
Sbjct: 760  401

[Close]

BLAST of MU63286 vs. NCBI nr
Match: gi|659082831|ref|XP_008442053.1| (PREDICTED: uncharacterized protein LOC103486033 [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 9.6e-76
Identity = 153/182 (84.07%), Postives = 153/182 (84.07%), Query Frame = 1


Query: 1   KLFAELLQGARSKNTLQTXXXXXXXXXXXXXXXFPAPGSAQKGYKKLSSLLHKQSESYPK 60
           KLFAELLQGARSKNTLQT               FPAPGSAQKGYKKLSSLLHKQSESYPK
Sbjct: 232 KLFAELLQGARSKNTLQTSQNKKSSASLAKSGSFPAPGSAQKGYKKLSSLLHKQSESYPK 291

Query: 61  QKSNSPHPSELVESESPKNFHEDMSPHDSDSTSHNIKQQTTPXXXXXXXXXXXXXWNQLV 120
           QKSNSPHPSELVESESPKNFHEDMSPHDSDSTSHNIKQQTTP             WNQLV
Sbjct: 292 QKSNSPHPSELVESESPKNFHEDMSPHDSDSTSHNIKQQTTPSSSGLNRGLRRGGWNQLV 351

Query: 121 VKRFNFIKQKIRCSLKERKRGNHQXTSKGIPTVHSSGHELPLHGEEARESIGTPTSENVS 180
           VKRFNFIKQKIRCSLKERKRGNHQ TSKGIPTVHSSGHELPLHGEEARESIGTPTSENVS
Sbjct: 352 VKRFNFIKQKIRCSLKERKRGNHQKTSKGIPTVHSSGHELPLHGEEARESIGTPTSENVS 411

Query: 181 GT 240
           GT
Sbjct: 412 GT 413

Query: 241  300
           
Sbjct: 472  413

Query: 301  360
           
Sbjct: 532  413

Query: 361  420
           
Sbjct: 592  413

Query: 421  480
           
Sbjct: 652  413

Query: 481  540
           
Sbjct: 712  413

Query: 541  547
           
Sbjct: 772  413

[Close]

BLAST of MU63286 vs. NCBI nr
Match: gi|778695282|ref|XP_011653965.1| (PREDICTED: uncharacterized protein LOC105435275 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 1.5e-60
Identity = 129/175 (73.71%), Postives = 135/175 (77.14%), Query Frame = 1


Query: 1   KLFAELLQGARSKNTLQTXXXXXXXXXXXXXXXFPAPGSAQKGYKKLSSLLHKQSESYPK 60
           KLFAELLQGA SKNTLQT               FPAP SAQKGY+KLSSL HKQSESYPK
Sbjct: 232 KLFAELLQGAHSKNTLQTSQNKKSSASLAKSGSFPAPSSAQKGYRKLSSLRHKQSESYPK 291

Query: 61  QKSNSPHPSELVESESPKNFHEDMSPHDSDSTSHNIKQQTTPXXXXXXXXXXXXXWNQLV 120
           QKSNSPHPS+LVES+SP+NFHEDM+P DSDSTSHNIK QTTP             WNQLV
Sbjct: 292 QKSNSPHPSKLVESKSPENFHEDMTPCDSDSTSHNIKHQTTPSSSGLNHGLRHGGWNQLV 351

Query: 121 VKRFNFIKQKIRCSLKERKRGNHQXTSKGIPTVHSSGHELPLHGEEARESIGTPT 180
           VKRFNFIKQKIR SLKERKRGNHQ TSKGIPTVHS GHELP H EEA+ES GT T
Sbjct: 352 VKRFNFIKQKIRGSLKERKRGNHQKTSKGIPTVHSPGHELPFHEEEAQESKGTAT 406

Query: 181  240
           
Sbjct: 412  406

Query: 241  300
           
Sbjct: 472  406

Query: 301  360
           
Sbjct: 532  406

Query: 361  420
           
Sbjct: 592  406

Query: 421  480
           
Sbjct: 652  406

Query: 481  526
           
Sbjct: 712  406

[Close]

BLAST of MU63286 vs. NCBI nr
Match: gi|659128277|ref|XP_008464131.1| (PREDICTED: uncharacterized protein LOC103502086 [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 1.6e-46
Identity = 117/183 (63.93%), Postives = 129/183 (70.49%), Query Frame = 1


Query: 1   KLFAELLQGARSKNTLQTXXXXXXXXXXXXXXXFPAPGSAQKGYKKLSSLLHKQSESYPK 60
           KLFAELLQGA +KNTLQT               FPAPG A+KGYKKLSSL HKQ E++PK
Sbjct: 220 KLFAELLQGAHNKNTLQTPQNKKSSASLAKSRSFPAPGLARKGYKKLSSLQHKQIEAFPK 279

Query: 61  -QKSNSPHPSELVESESPKNFHEDMSPHDSDSTS-HNIKQQTTPXXXXXXXXXXXXXWNQ 120
            QKS S  PS+LVES SPKNFHEDM P DSDST+ HNIKQ T+              WNQ
Sbjct: 280 VQKSVSLQPSKLVESASPKNFHEDMMPCDSDSTTDHNIKQATS-SSLGSNRGQKHGGWNQ 339

Query: 121 LVVKRFNFIKQKIRCSLKERKRGNHQXTSKGIPTVHSSGHELPLHGEEARESIGTPTSEN 180
           LVVKRFNFIKQKIR S KERK+GN+Q TSKGI     SGHEL L+GEEA ES+GT TSE+
Sbjct: 340 LVVKRFNFIKQKIRHSFKERKKGNNQKTSKGISIGDPSGHELSLYGEEAHESLGTATSED 399

Query: 181 VSG 240
            SG
Sbjct: 400 GSG 401

Query: 241  300
           
Sbjct: 460  401

Query: 301  360
           
Sbjct: 520  401

Query: 361  420
           
Sbjct: 580  401

Query: 421  480
           
Sbjct: 640  401

Query: 481  540
           
Sbjct: 700  401

Query: 541  544
           
Sbjct: 760  401

[Close]

BLAST of MU63286 vs. NCBI nr
Match: gi|778713883|ref|XP_011657152.1| (PREDICTED: uncharacterized protein LOC105435809 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 9.7e-44
Identity = 113/183 (61.75%), Postives = 125/183 (68.31%), Query Frame = 1


Query: 1   KLFAELLQGARSKNTLQTXXXXXXXXXXXXXXXFPAPGSAQKGYKKLSSLLHKQSESYPK 60
           KLFAELLQGA +KNT QT               FPAPG A+KGYKKLSSL HKQ E++PK
Sbjct: 220 KLFAELLQGAHNKNTQQTSQNKKSSASLAKSRSFPAPGLARKGYKKLSSLQHKQIEAFPK 279

Query: 61  -QKSNSPHPSELVESESPKNFHEDMSPHDSDSTS-HNIKQQTTPXXXXXXXXXXXXXWNQ 120
            QKS S  PS+LV S SPKNFHEDM P DS ST+ HNIK Q T              WNQ
Sbjct: 280 VQKSVSLQPSKLVGSASPKNFHEDMMPCDSVSTTNHNIKHQATSSLGSNRGQRHGG-WNQ 339

Query: 121 LVVKRFNFIKQKIRCSLKERKRGNHQXTSKGIPTVHSSGHELPLHGEEARESIGTPTSEN 180
           LVVKRFNFI+QKIR S KERK+GN+Q TSKGI     SGHEL L+GEEA ES+GT TSE+
Sbjct: 340 LVVKRFNFIRQKIRHSFKERKKGNNQKTSKGISARDPSGHELSLYGEEAHESLGTATSED 399

Query: 181 VSG 240
            SG
Sbjct: 400 GSG 401

Query: 241  300
           
Sbjct: 460  401

Query: 301  360
           
Sbjct: 520  401

Query: 361  420
           
Sbjct: 580  401

Query: 421  480
           
Sbjct: 640  401

Query: 481  540
           
Sbjct: 700  401

Query: 541  544
           
Sbjct: 760  401

The following BLAST results are available for this feature:

BLAST of MU63286 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1J3_CUCSA	5.9e-64	73.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G598010 PE=4 SV=1	[more]
A0A0A0KFF4_CUCSA	2.9e-47	61.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G190430 PE=4 SV=1	[more]

BLAST of MU63286 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082831\|ref\|XP_008442053.1\|	9.6e-76	84.07	PREDICTED: uncharacterized protein LOC103486033 [Cucumis melo]	[more]
gi\|778695282\|ref\|XP_011653965.1\|	1.5e-60	73.71	PREDICTED: uncharacterized protein LOC105435275 [Cucumis sativus]	[more]
gi\|659128277\|ref\|XP_008464131.1\|	1.6e-46	63.93	PREDICTED: uncharacterized protein LOC103502086 [Cucumis melo]	[more]
gi\|778713883\|ref\|XP_011657152.1\|	9.7e-44	61.75	PREDICTED: uncharacterized protein LOC105435809 [Cucumis sativus]	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C008878	MELO3C008878	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
PEa0010E22	PEa0010E22	EST