MU63031 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU63031
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	NBS-LRR disease resistance protein
Location	chr11 : 6771669 .. 6772216 (-)
Sequence length	551

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ATTCTTTCTGAGAGAGAACCTTAGAATTGCACAATGGGTGATTTCCTATGGACTTTTGCTGTGGAAGAAATGTTGAAGAAGGTGTTGAAGGTTGCACGGGAGCAAGCTGGCCTAGCATGGGGCTTCCAGAAACATCTCTCCAAGCTCCAAAAATGGCTACTCAAGGCTGAAGCTTTCTTACGCAATATCAACACGAGAAAACTACATCATGATTCTGTGAGGATGTGGGTGGATGACCTTCGGCATCTTGTTTATCAAGCCGATGATCTATTAGACGAAATTGTTTATGAACATCTTCGACAAAAGGTCCAAACAAGAAAAATGAAGAAGGTGTGTGATTTTTTTTCTCCTTCTACCAATGTTTTGATCTTTCGTCTTAACATGGCAAAAAAAATGATGACTCTTATAGCATTGTTAGAAAAGCATTACCTTGAGGCTGCTCCTTTAGGACTTGTGGGGAATGAAAACGTAAGACCAGAGATCGATGTTATTAGTCAATATCGAGAGACATTTTCAGATCTCGAAGATCATAAGATTGTGGGGAGGGGATG

Library


Library category	ESTs
melon CM-PEa library	1

Homology

[Close]

BLAST of MU63031 vs. TrEMBL
Match: Q6E436_CUCME (FOM-2 OS=Cucumis melo GN=Fom-2 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.3e-91
Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 1


Query: 34  MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 93
           MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 60

Query: 94  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK 153
           SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK 120

Query: 154 MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETFSDLEDHKIVGR 213
           MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRET S+LEDHKIVGR
Sbjct: 121 MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETISELEDHKIVGR 171

Query: 214  273
           
Sbjct: 181  171

Query: 274  333
           
Sbjct: 241  171

Query: 334  393
           
Sbjct: 301  171

Query: 394  453
           
Sbjct: 361  171

Query: 454  513
           
Sbjct: 421  171

Query: 514  547
           
Sbjct: 481  171

[Close]

BLAST of MU63031 vs. TrEMBL
Match: Q2V727_CUCME (R-FOM-2 OS=Cucumis melo PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-88
Identity = 165/171 (96.49%), Postives = 167/171 (97.66%), Query Frame = 1


Query: 34  MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 93
           MGDFLWTFAVEEMLKKVLKVAREQ GLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAREQTGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 60

Query: 94  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK 153
           SVRMWVDDLRHLVYQADDLLDEIVYE LRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEDLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK 120

Query: 154 MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETFSDLEDHKIVGR 213
           MMTLIALLEKHYLEAAPLGLVGNENV PEIDVISQYRET S+LEDHKI+GR
Sbjct: 121 MMTLIALLEKHYLEAAPLGLVGNENVSPEIDVISQYRETISELEDHKILGR 171

Query: 214  273
           
Sbjct: 181  171

Query: 274  333
           
Sbjct: 241  171

Query: 334  393
           
Sbjct: 301  171

Query: 394  453
           
Sbjct: 361  171

Query: 454  513
           
Sbjct: 421  171

Query: 514  547
           
Sbjct: 481  171

[Close]

BLAST of MU63031 vs. TrEMBL
Match: A0A0A0LCB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G684170 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.2e-70
Identity = 141/172 (81.98%), Postives = 151/172 (87.79%), Query Frame = 1


Query: 34  MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 93
           M DFLWTFAVEEMLK VLKVA EQ GLAWGFQ+HLS LQKWLL A+AFLR+INTRKLH  
Sbjct: 1   MADFLWTFAVEEMLKNVLKVAGEQTGLAWGFQEHLSNLQKWLLNAQAFLRDINTRKLHLH 60

Query: 94  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPST-NVLIFRLNMAK 153
           SV +WVD L+ LVYQA+DLLDEIVYEHLRQKVQT +M KVCDFFS ST NVLIFRL+MAK
Sbjct: 61  SVSIWVDHLQFLVYQAEDLLDEIVYEHLRQKVQTTEM-KVCDFFSLSTDNVLIFRLDMAK 120

Query: 154 KMMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETFSDLEDHKIVGR 213
           KMMTL+ LLEKHY EAAPLGLVG E VRPEIDVISQYRET S+LEDHKI GR
Sbjct: 121 KMMTLVQLLEKHYNEAAPLGLVGIETVRPEIDVISQYRETISELEDHKIAGR 171

Query: 214  273
           
Sbjct: 181  171

Query: 274  333
           
Sbjct: 241  171

Query: 334  393
           
Sbjct: 301  171

Query: 394  453
           
Sbjct: 361  171

Query: 454  513
           
Sbjct: 421  171

Query: 514  547
           
Sbjct: 481  171

[Close]

BLAST of MU63031 vs. TrEMBL
Match: A0A0A0KXG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G016460 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-44
Identity = 98/172 (56.98%), Postives = 125/172 (72.67%), Query Frame = 1


Query: 34  MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 93
           M +FLWTFAV+E+LKKVLK+A +Q GLAWG  K LS L +WLLKAEA L  IN +KLH  
Sbjct: 1   MAEFLWTFAVQEVLKKVLKLAADQIGLAWGLDKELSNLSQWLLKAEAILGEINRKKLHPS 60

Query: 94  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNV-LIFRLNMAK 153
           SVR+WV+DL+ +V++ADDLLDE+VYE LR KV+   + KV    S  +N+ +IFR  MAK
Sbjct: 61  SVRLWVEDLQLVVHEADDLLDELVYEDLRTKVEKGPINKVRSSISSLSNIFIIFRFKMAK 120

Query: 154 KMMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETFSDLEDHKIVGR 213
           K+  +I  L K Y EA PLGLVG E ++ E D +SQ RET S L+D ++VGR
Sbjct: 121 KIKAIIQKLRKCYSEATPLGLVGEEFIQTEND-LSQIRETISKLDDFEVVGR 171

Query: 214  273
           
Sbjct: 181  171

Query: 274  333
           
Sbjct: 241  171

Query: 334  393
           
Sbjct: 301  171

Query: 394  453
           
Sbjct: 361  171

Query: 454  513
           
Sbjct: 421  171

Query: 514  547
           
Sbjct: 481  171

[Close]

BLAST of MU63031 vs. TrEMBL
Match: A0A0A0KST5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G266890 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.0e-43
Identity = 93/172 (54.07%), Postives = 122/172 (70.93%), Query Frame = 1


Query: 34  MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 93
           M +FLWTFAV+E+LKK++    EQ  LAWG +K LS L+KWLLKA+  L +INT+K HH 
Sbjct: 1   MAEFLWTFAVQEVLKKIVNFGAEQISLAWGLEKELSHLKKWLLKAQTILADINTKKSHHH 60

Query: 94  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKV-QTRKMKKVCDFFSPSTNVLIFRLNMAK 153
           SV +WV++L  ++Y+ADDLLDEIVYE +RQ V QT K++KV D  SPS N  +F L MAK
Sbjct: 61  SVGLWVEELHDIIYEADDLLDEIVYEQIRQTVEQTGKLRKVRDSISPSKNSFLFGLKMAK 120

Query: 154 KMMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETFSDLEDHKIVGR 213
           KM  +   L +HY EA+PLGLVG+E+       ++Q RET S L D ++ GR
Sbjct: 121 KMKKITKTLYEHYCEASPLGLVGDESTTESEAALNQIRETTSIL-DFEVEGR 171

Query: 214  273
           
Sbjct: 181  171

Query: 274  333
           
Sbjct: 241  171

Query: 334  393
           
Sbjct: 301  171

Query: 394  453
           
Sbjct: 361  171

Query: 454  513
           
Sbjct: 421  171

Query: 514  547
           
Sbjct: 481  171

[Close]

BLAST of MU63031 vs. NCBI nr
Match: gi|659118494|ref|XP_008459150.1| (PREDICTED: putative disease resistance protein RGA3 [Cucumis melo])

HSP 1 Score: 342.4 bits (877), Expect = 4.8e-91
Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 1


Query: 34  MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 93
           MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 60

Query: 94  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK 153
           SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK 120

Query: 154 MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETFSDLEDHKIVGR 213
           MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRET S+LEDHKIVGR
Sbjct: 121 MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETISELEDHKIVGR 171

Query: 214  273
           
Sbjct: 181  171

Query: 274  333
           
Sbjct: 241  171

Query: 334  393
           
Sbjct: 301  171

Query: 394  453
           
Sbjct: 361  171

Query: 454  513
           
Sbjct: 421  171

Query: 514  547
           
Sbjct: 481  171

[Close]

BLAST of MU63031 vs. NCBI nr
Match: gi|46095229|gb|AAS80152.1| (FOM-2 [Cucumis melo])

HSP 1 Score: 342.4 bits (877), Expect = 4.8e-91
Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 1


Query: 34  MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 93
           MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 60

Query: 94  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK 153
           SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK 120

Query: 154 MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETFSDLEDHKIVGR 213
           MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRET S+LEDHKIVGR
Sbjct: 121 MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETISELEDHKIVGR 171

Query: 214  273
           
Sbjct: 181  171

Query: 274  333
           
Sbjct: 241  171

Query: 334  393
           
Sbjct: 301  171

Query: 394  453
           
Sbjct: 361  171

Query: 454  513
           
Sbjct: 421  171

Query: 514  547
           
Sbjct: 481  171

[Close]

BLAST of MU63031 vs. NCBI nr
Match: gi|82794018|gb|ABB91438.1| (R-FOM-2 [Cucumis melo])

HSP 1 Score: 334.0 bits (855), Expect = 1.7e-88
Identity = 165/171 (96.49%), Postives = 167/171 (97.66%), Query Frame = 1


Query: 34  MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 93
           MGDFLWTFAVEEMLKKVLKVAREQ GLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAREQTGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 60

Query: 94  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK 153
           SVRMWVDDLRHLVYQADDLLDEIVYE LRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEDLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK 120

Query: 154 MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETFSDLEDHKIVGR 213
           MMTLIALLEKHYLEAAPLGLVGNENV PEIDVISQYRET S+LEDHKI+GR
Sbjct: 121 MMTLIALLEKHYLEAAPLGLVGNENVSPEIDVISQYRETISELEDHKILGR 171

Query: 214  273
           
Sbjct: 181  171

Query: 274  333
           
Sbjct: 241  171

Query: 334  393
           
Sbjct: 301  171

Query: 394  453
           
Sbjct: 361  171

Query: 454  513
           
Sbjct: 421  171

Query: 514  547
           
Sbjct: 481  171

[Close]

BLAST of MU63031 vs. NCBI nr
Match: gi|659125623|ref|XP_008462780.1| (PREDICTED: disease resistance protein RGA2-like [Cucumis melo])

HSP 1 Score: 316.6 bits (810), Expect = 2.8e-83
Identity = 155/171 (90.64%), Postives = 160/171 (93.57%), Query Frame = 1


Query: 34  MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 93
           MGDFLWTFAVEEMLKKVLKVA+EQ GLAWGFQKHLSKLQKWLLKAEAFLR+INTRKLHHD
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAQEQTGLAWGFQKHLSKLQKWLLKAEAFLRDINTRKLHHD 60

Query: 94  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPSTNVLIFRLNMAKK 153
           SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKV TRKMKKVCDFFSPS+N  IFR NMA K
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVHTRKMKKVCDFFSPSSNAFIFRRNMANK 120

Query: 154 MMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETFSDLEDHKIVGR 213
           MMTL+ LLEKHY EAAPLGLV NEN RPEIDVISQYRET S+LEDHKIVGR
Sbjct: 121 MMTLVELLEKHYNEAAPLGLVVNENARPEIDVISQYRETISELEDHKIVGR 171

Query: 214  273
           
Sbjct: 181  171

Query: 274  333
           
Sbjct: 241  171

Query: 334  393
           
Sbjct: 301  171

Query: 394  453
           
Sbjct: 361  171

Query: 454  513
           
Sbjct: 421  171

Query: 514  547
           
Sbjct: 481  171

[Close]

BLAST of MU63031 vs. NCBI nr
Match: gi|778682703|ref|XP_004149742.2| (PREDICTED: disease resistance protein RGA2-like [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 6.1e-70
Identity = 141/172 (81.98%), Postives = 151/172 (87.79%), Query Frame = 1


Query: 34  MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 93
           M DFLWTFAVEEMLK VLKVA EQ GLAWGFQ+HLS LQKWLL A+AFLR+INTRKLH  
Sbjct: 1   MADFLWTFAVEEMLKNVLKVAGEQTGLAWGFQEHLSNLQKWLLNAQAFLRDINTRKLHLH 60

Query: 94  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKKVCDFFSPST-NVLIFRLNMAK 153
           SV +WVD L+ LVYQA+DLLDEIVYEHLRQKVQT +M KVCDFFS ST NVLIFRL+MAK
Sbjct: 61  SVSIWVDHLQFLVYQAEDLLDEIVYEHLRQKVQTTEM-KVCDFFSLSTDNVLIFRLDMAK 120

Query: 154 KMMTLIALLEKHYLEAAPLGLVGNENVRPEIDVISQYRETFSDLEDHKIVGR 213
           KMMTL+ LLEKHY EAAPLGLVG E VRPEIDVISQYRET S+LEDHKI GR
Sbjct: 121 KMMTLVQLLEKHYNEAAPLGLVGIETVRPEIDVISQYRETISELEDHKIAGR 171

Query: 214  273
           
Sbjct: 181  171

Query: 274  333
           
Sbjct: 241  171

Query: 334  393
           
Sbjct: 301  171

Query: 394  453
           
Sbjct: 361  171

Query: 454  513
           
Sbjct: 421  171

Query: 514  547
           
Sbjct: 481  171

The following BLAST results are available for this feature:

BLAST of MU63031 vs. TrEMBL


Match Name	E-value	Identity	Description
Q6E436_CUCME	3.3e-91	98.83	FOM-2 OS=Cucumis melo GN=Fom-2 PE=3 SV=1	[more]
Q2V727_CUCME	1.2e-88	96.49	R-FOM-2 OS=Cucumis melo PE=3 SV=1	[more]
A0A0A0LCB5_CUCSA	4.2e-70	81.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G684170 PE=3 SV=1	[more]
A0A0A0KXG9_CUCSA	1.4e-44	56.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G016460 PE=3 SV=1	[more]
A0A0A0KST5_CUCSA	2.0e-43	54.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G266890 PE=3 SV=1	[more]

BLAST of MU63031 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118494\|ref\|XP_008459150.1\|	4.8e-91	98.83	PREDICTED: putative disease resistance protein RGA3 [Cucumis melo]	[more]
gi\|46095229\|gb\|AAS80152.1\|	4.8e-91	98.83	FOM-2 [Cucumis melo]	[more]
gi\|82794018\|gb\|ABB91438.1\|	1.7e-88	96.49	R-FOM-2 [Cucumis melo]	[more]
gi\|659125623\|ref\|XP_008462780.1\|	2.8e-83	90.64	PREDICTED: disease resistance protein RGA2-like [Cucumis melo]	[more]
gi\|778682703\|ref\|XP_004149742.2\|	6.1e-70	81.98	PREDICTED: disease resistance protein RGA2-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C021831	MELO3C021831	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
PEa0006F06	PEa0006F06	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23155	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 3..171 score: 2.4
None	No IPR available	PANTHER	PTHR23155:SF563	SUBFAMILY NOT NAMED	coord: 3..171 score: 2.4