MU62923 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU62923
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGlutamate receptor
Locationchr7 : 254807 .. 255112 (-)
Sequence length173
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

TTTCTGGGCATGGTTGAAGTTTTGCAACTTATGGAGAATGAAACCGTTGCCATCATAGGCCCCCAGTCTTCTGTTGTTGCCCACATTTCATCCCAAGTTGCAACTGAGTTCCAAGTCCCTCTGGTCTCCTTTTCAGCTACTGATCCTACCCTCTCTGCCCTTCAGTTTCCTTT
Library
Library categoryESTs
melon CM-PEa library1
Homology
[Close]
BLAST of MU62923 vs. Swiss-Prot
Match: GLR31_ORYSJ (Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-14
Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           FLG+V+ LQ ME +TVAIIGP SS  AH+ S +A E  VPL+SFSATDPTLS+L++P
Sbjct: 81  FLGIVQALQFMEKDTVAIIGPLSSTTAHVLSHLANELHVPLMSFSATDPTLSSLEYP 137

Query: 61   120
           
Sbjct: 141  137

Query: 121  172
           
Sbjct: 201  137

[Close]
BLAST of MU62923 vs. Swiss-Prot
Match: GLR34_ARATH (Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 4.3e-14
Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           F+G +  LQLMEN+ VA IGPQSS +AH+ S VA E  VPL+SF ATDPTLS+LQFP
Sbjct: 112 FIGTMGALQLMENKVVAAIGPQSSGIAHMISYVANELHVPLLSFGATDPTLSSLQFP 168

Query: 61   120
           
Sbjct: 172  168

Query: 121  172
           
Sbjct: 232  168

[Close]
BLAST of MU62923 vs. Swiss-Prot
Match: GLR36_ARATH (Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-13
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           F+ ++E LQ ME+ETVAIIGPQ S  A + + VATE ++P++SFSATDPT+S LQFP
Sbjct: 81  FMSIMEPLQFMESETVAIIGPQRSTTARVVAHVATELKIPILSFSATDPTMSPLQFP 137

Query: 61   120
           
Sbjct: 141  137

Query: 121  172
           
Sbjct: 201  137

[Close]
BLAST of MU62923 vs. Swiss-Prot
Match: GLR35_ARATH (Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-13
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           F+G +  LQLMEN+ VA IGPQSS + HI S VA E  VP +SF+ATDPTLS+LQ+P
Sbjct: 99  FVGTMGALQLMENKVVAAIGPQSSGIGHIISHVANELHVPFLSFAATDPTLSSLQYP 155

Query: 61   120
           
Sbjct: 159  155

Query: 121  172
           
Sbjct: 219  155

[Close]
BLAST of MU62923 vs. Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-13
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           F+GMVE L+ ME + V IIGPQ SVVAH+ S +A E +VPL+SF+ TDP +S LQFP
Sbjct: 80  FMGMVEALRFMEKDIVGIIGPQCSVVAHMISHMANELRVPLLSFAVTDPVMSPLQFP 136

Query: 61   120
           
Sbjct: 140  136

Query: 121  172
           
Sbjct: 200  136

[Close]
BLAST of MU62923 vs. TrEMBL
Match: A0A0A0L5Y1_CUCSA (Glutamate receptor OS=Cucumis sativus GN=Csa_4G664290 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.9e-21
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           FLGMVEVLQLMEN+TVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP
Sbjct: 83  FLGMVEVLQLMENKTVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 139

Query: 61   120
           
Sbjct: 143  139

Query: 121  172
           
Sbjct: 203  139

[Close]
BLAST of MU62923 vs. TrEMBL
Match: A0A067FVZ5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002505mg PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.6e-15
Identity = 42/57 (73.68%), Postives = 51/57 (89.47%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           FLGMVE L L+ENETVAIIGPQ SV+AH+ S +A EFQVPL+SF+ATDP+LS+LQ+P
Sbjct: 84  FLGMVEALTLLENETVAIIGPQFSVIAHLVSHIANEFQVPLLSFAATDPSLSSLQYP 140

Query: 61   120
           
Sbjct: 144  140

Query: 121  172
           
Sbjct: 204  140

[Close]
BLAST of MU62923 vs. TrEMBL
Match: V4SI25_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024825mg PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.6e-15
Identity = 42/57 (73.68%), Postives = 51/57 (89.47%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           FLGMVE L L+ENETVAIIGPQ SV+AH+ S +A EFQVPL+SF+ATDP+LS+LQ+P
Sbjct: 62  FLGMVEALTLLENETVAIIGPQFSVIAHLVSHIANEFQVPLLSFAATDPSLSSLQYP 118

Query: 61   120
           
Sbjct: 122  118

Query: 121  172
           
Sbjct: 182  118

[Close]
BLAST of MU62923 vs. TrEMBL
Match: V4RUW0_9ROSI (Glutamate receptor OS=Citrus clementina GN=CICLE_v10024825mg PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.6e-15
Identity = 42/57 (73.68%), Postives = 51/57 (89.47%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           FLGMVE L L+ENETVAIIGPQ SV+AH+ S +A EFQVPL+SF+ATDP+LS+LQ+P
Sbjct: 62  FLGMVEALTLLENETVAIIGPQFSVIAHLVSHIANEFQVPLLSFAATDPSLSSLQYP 118

Query: 61   120
           
Sbjct: 122  118

Query: 121  172
           
Sbjct: 182  118

[Close]
BLAST of MU62923 vs. TrEMBL
Match: A0A067G7J3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002505mg PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.6e-15
Identity = 42/57 (73.68%), Postives = 51/57 (89.47%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           FLGMVE L L+ENETVAIIGPQ SV+AH+ S +A EFQVPL+SF+ATDP+LS+LQ+P
Sbjct: 84  FLGMVEALTLLENETVAIIGPQFSVIAHLVSHIANEFQVPLLSFAATDPSLSSLQYP 140

Query: 61   120
           
Sbjct: 144  140

Query: 121  172
           
Sbjct: 204  140

[Close]
BLAST of MU62923 vs. TAIR10
Match: AT1G05200.1 (AT1G05200.1 glutamate receptor 3.4)

HSP 1 Score: 77.8 bits (190), Expect = 2.4e-15
Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           F+G +  LQLMEN+ VA IGPQSS +AH+ S VA E  VPL+SF ATDPTLS+LQFP
Sbjct: 112 FIGTMGALQLMENKVVAAIGPQSSGIAHMISYVANELHVPLLSFGATDPTLSSLQFP 168

Query: 61   120
           
Sbjct: 172  168

Query: 121  172
           
Sbjct: 232  168

[Close]
BLAST of MU62923 vs. TAIR10
Match: AT3G51480.1 (AT3G51480.1 glutamate receptor 3.6)

HSP 1 Score: 76.3 bits (186), Expect = 7.0e-15
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           F+ ++E LQ ME+ETVAIIGPQ S  A + + VATE ++P++SFSATDPT+S LQFP
Sbjct: 81  FMSIMEPLQFMESETVAIIGPQRSTTARVVAHVATELKIPILSFSATDPTMSPLQFP 137

Query: 61   120
           
Sbjct: 141  137

Query: 121  172
           
Sbjct: 201  137

[Close]
BLAST of MU62923 vs. TAIR10
Match: AT1G42540.1 (AT1G42540.1 glutamate receptor 3.3)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-14
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           F+GMVE L+ ME + V IIGPQ SVVAH+ S +A E +VPL+SF+ TDP +S LQFP
Sbjct: 80  FMGMVEALRFMEKDIVGIIGPQCSVVAHMISHMANELRVPLLSFAVTDPVMSPLQFP 136

Query: 61   120
           
Sbjct: 140  136

Query: 121  172
           
Sbjct: 200  136

[Close]
BLAST of MU62923 vs. TAIR10
Match: AT2G32390.3 (AT2G32390.3 glutamate receptor 3.5)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-14
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           F+G +  LQLMEN+ VA IGPQSS + HI S VA E  VP +SF+ATDPTLS+LQ+P
Sbjct: 94  FVGTMGALQLMENKVVAAIGPQSSGIGHIISHVANELHVPFLSFAATDPTLSSLQYP 150

Query: 61   120
           
Sbjct: 154  150

Query: 121  172
           
Sbjct: 214  150

[Close]
BLAST of MU62923 vs. TAIR10
Match: AT4G35290.2 (AT4G35290.2 glutamate receptor 2)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-13
Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           FL ++  LQ ME + VAIIGPQ+S++AH+ S +A E  VP++SF+A DP+LSALQFP
Sbjct: 81  FLTIMGALQFMETDAVAIIGPQTSIMAHVLSHLANELSVPMLSFTALDPSLSALQFP 137

Query: 61   120
           
Sbjct: 141  137

Query: 121  172
           
Sbjct: 201  137

[Close]
BLAST of MU62923 vs. NCBI nr
Match: gi|659105064|ref|XP_008452999.1| (PREDICTED: glutamate receptor 3.3 isoform X1 [Cucumis melo])

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-20
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP
Sbjct: 83  FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 139

Query: 61   120
           
Sbjct: 143  139

Query: 121  172
           
Sbjct: 203  139

[Close]
BLAST of MU62923 vs. NCBI nr
Match: gi|449455617|ref|XP_004145549.1| (PREDICTED: glutamate receptor 3.3 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 4.0e-20
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           FLGMVEVLQLMEN+TVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP
Sbjct: 83  FLGMVEVLQLMENKTVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 139

Query: 61   120
           
Sbjct: 143  139

Query: 121  172
           
Sbjct: 203  139

[Close]
BLAST of MU62923 vs. NCBI nr
Match: gi|659105067|ref|XP_008453000.1| (PREDICTED: glutamate receptor 3.3 isoform X2 [Cucumis melo])

HSP 1 Score: 100.5 bits (249), Expect = 9.9e-19
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 10  MVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 69
           MVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP
Sbjct: 1   MVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 54

Query: 70   129
           
Sbjct: 61   54

Query: 130  172
           
Sbjct: 121  54

[Close]
BLAST of MU62923 vs. NCBI nr
Match: gi|764589698|ref|XP_011465033.1| (PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 3.3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 85.9 bits (211), Expect = 2.5e-14
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           FLGMVE LQ ME + VAIIGPQSSVVAHI S VA E QVPL+SF+ATDPTLS+LQFP
Sbjct: 88  FLGMVEALQFMETDIVAIIGPQSSVVAHIVSHVANELQVPLLSFAATDPTLSSLQFP 144

Query: 61   120
           
Sbjct: 148  144

Query: 121  172
           
Sbjct: 208  144

[Close]
BLAST of MU62923 vs. NCBI nr
Match: gi|641852650|gb|KDO71515.1| (hypothetical protein CISIN_1g002505mg [Citrus sinensis])

HSP 1 Score: 85.5 bits (210), Expect = 3.3e-14
Identity = 42/57 (73.68%), Postives = 51/57 (89.47%), Query Frame = 1 

Query: 1   FLGMVEVLQLMENETVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFP 60
           FLGMVE L L+ENETVAIIGPQ SV+AH+ S +A EFQVPL+SF+ATDP+LS+LQ+P
Sbjct: 84  FLGMVEALTLLENETVAIIGPQFSVIAHLVSHIANEFQVPLLSFAATDPSLSSLQYP 140

Query: 61   120
           
Sbjct: 144  140

Query: 121  172
           
Sbjct: 204  140

The following BLAST results are available for this feature:
BLAST of MU62923 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GLR31_ORYSJ1.9e-1464.91Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1[more]
GLR34_ARATH4.3e-1466.67Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2[more]
GLR36_ARATH1.2e-1361.40Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1[more]
GLR35_ARATH2.8e-1363.16Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2[more]
GLR33_ARATH2.8e-1361.40Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1[more]
BLAST of MU62923 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5Y1_CUCSA1.9e-2198.25Glutamate receptor OS=Cucumis sativus GN=Csa_4G664290 PE=3 SV=1[more]
A0A067FVZ5_CITSI1.6e-1573.68Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002505mg PE=4 SV=1[more]
V4SI25_9ROSI1.6e-1573.68Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024825mg PE=3 SV=1[more]
V4RUW0_9ROSI1.6e-1573.68Glutamate receptor OS=Citrus clementina GN=CICLE_v10024825mg PE=3 SV=1[more]
A0A067G7J3_CITSI1.6e-1573.68Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002505mg PE=3 SV=1[more]
BLAST of MU62923 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G05200.12.4e-1566.67 glutamate receptor 3.4[more]
AT3G51480.17.0e-1561.40 glutamate receptor 3.6[more]
AT1G42540.11.6e-1461.40 glutamate receptor 3.3[more]
AT2G32390.31.6e-1463.16 glutamate receptor 3.5[more]
AT4G35290.21.3e-1357.89 glutamate receptor 2[more]
BLAST of MU62923 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659105064|ref|XP_008452999.1|1.4e-20100.00PREDICTED: glutamate receptor 3.3 isoform X1 [Cucumis melo][more]
gi|449455617|ref|XP_004145549.1|4.0e-2098.25PREDICTED: glutamate receptor 3.3 [Cucumis sativus][more]
gi|659105067|ref|XP_008453000.1|9.9e-19100.00PREDICTED: glutamate receptor 3.3 isoform X2 [Cucumis melo][more]
gi|764589698|ref|XP_011465033.1|2.5e-1478.95PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 3.3 [Fragaria vesca subsp. ve... [more]
gi|641852650|gb|KDO71515.1|3.3e-1473.68hypothetical protein CISIN_1g002505mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR001828ANF_lig-bd_rcpt
IPR028082Peripla_BP_I
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C017043MELO3C017043gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
PEa0004P07PEa0004P07EST


InterPro
Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001828Receptor, ligand binding regionPFAMPF01094ANF_receptorcoord: 3..56
score: 6.7
IPR028082Periplasmic binding protein-like IunknownSSF53822Periplasmic binding protein-like Icoord: 4..57
score: 1.75
NoneNo IPR availableGENE3DG3DSA:3.40.50.2300coord: 12..57
score: 2.
NoneNo IPR availablePANTHERPTHR18966IONOTROPIC GLUTAMATE RECEPTORcoord: 1..57
score: 1.1
NoneNo IPR availablePANTHERPTHR18966:SF241GLUTAMATE RECEPTOR 3.6-RELATEDcoord: 1..57
score: 1.1