|
|
The following sequences are available for this feature:
transcribed_cluster sequence AAACAACGAGATTCTGCTCTCTTGTTAAAGTGGTTTTGGCAGTTCTCCCTGCAAGAAAATAGTCTAGGGAGGAGAGTTATTGTTGTTATATATGCCATATAGTCAAATGGTTGGCTAATTAAACGTCCTAAAATGGTTGCCAGTGGAAGGCCTTGGATATATCTTGAGAAAAATAGGTAATTGTTCCTTGATCTAGTAAATTTGAAGTCTGCAGTGGCACAAAAGTTCGGTTTTGAAAAGATACATGGGCACCACATGCTCCTCTCCTTGTCAAATACCCTGTTTTATATGCCTTATCTTAAAAAACAGAGGCTTCAATCTCAGACTGTTGGTAAGTTACTGCAAATACTTGGTATTTGGGGTCGAGGAGGCACTTTTTTGACTGTGAGATTCCTAGAGGTGCTAAGTTCATAGAGCATATTAAGATTGGTAGGCTGGGAAGTAGTTTGGACTGACTTGTGGGAAGTTGACCTTTTTGGCACTTTGAATGCTTCTGTTTTCCTTCATTTGACGCAGTCTCGTGCCCAATCCAACACCCCTGTTGTTGACTATACATGGGAGAATAAGGTTCCCATGAAAGTGATTTAC
BLAST of MU62667 vs. NCBI nr
Match: gi|595883970|ref|XP_007212886.1| (hypothetical protein PRUPE_ppa021750mg, partial [Prunus persica]) HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06 Identity = 53/199 (26.63%), Postives = 76/199 (38.19%), Query Frame = 1
Query: 1 KQRDSALLLKWFWQFSLQENSLGRRVIVVIYAI*SNGWLIKRPKMVASGRPWIYLEKNR* 60
++R+ AL KW W+F L+ NSL R+I Y I SNGW KR V+ PW + K
Sbjct: 598 RERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRNPWREISKGYN 657
Query: 61 LFLDLVNLKSAVAQKFGF--EKIHGHHMLLSLSNTLFYMPYLKKQRLQSQTVGKLLQILG 120
FL +K F + +L L L + K Q + +L +
Sbjct: 658 SFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIACFANNHVLPLNW 717
Query: 121 IWGRGGTFLTVRFLEVLSS*SIL---RLVGWEVVWTDLWEVDLFGTLNASVFLHLTQSRA 180
+ EV+ IL RL G WEV+ G+ + F S
Sbjct: 718 DFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRS-WEVEEQGSFSCKSFRSFLLSTT 777
Query: 181 QSNTPVVDYTWENKVPMKV 240
+ P W+ K P K+
Sbjct: 778 RDVFPPFSSIWKAKTPPKI 795
Query: 241 300
Sbjct: 838 795
Query: 301 360
Sbjct: 898 795
Query: 361 420
Sbjct: 958 795
Query: 421 480
Sbjct: 1018 795
Query: 481 540
Sbjct: 1078 795
Query: 541 583
Sbjct: 1138 795
BLAST of MU62667 vs. NCBI nr
Match: gi|596232261|ref|XP_007224309.1| (hypothetical protein PRUPE_ppa019854mg [Prunus persica]) HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06 Identity = 53/199 (26.63%), Postives = 76/199 (38.19%), Query Frame = 1
Query: 1 KQRDSALLLKWFWQFSLQENSLGRRVIVVIYAI*SNGWLIKRPKMVASGRPWIYLEKNR* 60
++R+ AL KW W+F L+ NSL R+I Y I SNGW KR V+ PW + K
Sbjct: 112 RERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRNPWREISKGYN 171
Query: 61 LFLDLVNLKSAVAQKFGF--EKIHGHHMLLSLSNTLFYMPYLKKQRLQSQTVGKLLQILG 120
FL +K F + +L L L + K Q + +L +
Sbjct: 172 SFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIACFANNHVLPLNW 231
Query: 121 IWGRGGTFLTVRFLEVLSS*SIL---RLVGWEVVWTDLWEVDLFGTLNASVFLHLTQSRA 180
+ EV+ IL RL G WEV+ G+ + F S
Sbjct: 232 DFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRS-WEVEEQGSFSCKSFRSFLLSTT 291
Query: 181 QSNTPVVDYTWENKVPMKV 240
+ P W+ K P K+
Sbjct: 292 RDVFPPFSSIWKAKTPPKI 309
Query: 241 300
Sbjct: 352 309
Query: 301 360
Sbjct: 412 309
Query: 361 420
Sbjct: 472 309
Query: 421 480
Sbjct: 532 309
Query: 481 540
Sbjct: 592 309
Query: 541 583
Sbjct: 652 309
BLAST of MU62667 vs. NCBI nr
Match: gi|595905097|ref|XP_007214027.1| (hypothetical protein PRUPE_ppa016677mg [Prunus persica]) HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06 Identity = 53/199 (26.63%), Postives = 76/199 (38.19%), Query Frame = 1
Query: 1 KQRDSALLLKWFWQFSLQENSLGRRVIVVIYAI*SNGWLIKRPKMVASGRPWIYLEKNR* 60
++R+ AL KW W+F L+ NSL R+I Y I SNGW KR V+ PW + K
Sbjct: 1105 RERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRNPWREISKGYN 1164
Query: 61 LFLDLVNLKSAVAQKFGF--EKIHGHHMLLSLSNTLFYMPYLKKQRLQSQTVGKLLQILG 120
FL +K F + +L L L + K Q + +L +
Sbjct: 1165 SFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIACFANNHVLPLNW 1224
Query: 121 IWGRGGTFLTVRFLEVLSS*SIL---RLVGWEVVWTDLWEVDLFGTLNASVFLHLTQSRA 180
+ EV+ IL RL G WEV+ G+ + F S
Sbjct: 1225 DFDFRRNLSEAELAEVVILLDILGNVRLYGSRPDRRS-WEVEEQGSFSCKSFRSFLLSTT 1284
Query: 181 QSNTPVVDYTWENKVPMKV 240
+ P W+ K P K+
Sbjct: 1285 RDVFPPFSSIWKAKTPPKI 1302
Query: 241 300
Sbjct: 1345 1302
Query: 301 360
Sbjct: 1405 1302
Query: 361 420
Sbjct: 1465 1302
Query: 421 480
Sbjct: 1525 1302
Query: 481 540
Sbjct: 1585 1302
Query: 541 583
Sbjct: 1645 1302
BLAST of MU62667 vs. NCBI nr
Match: gi|596230697|ref|XP_007224290.1| (hypothetical protein PRUPE_ppa020085mg, partial [Prunus persica]) HSP 1 Score: 60.1 bits (144), Expect = 5.1e-06 Identity = 51/198 (25.76%), Postives = 77/198 (38.89%), Query Frame = 1
Query: 1 KQRDSALLLKWFWQFSLQENSLGRRVIVVIYAI*SNGWLIKRPKMVASGRPWIYLEKNR* 60
++R+ AL KW W+F L+ NSL R+I Y I SNGW K+ V+ PW + K
Sbjct: 841 RERNEALRAKWLWRFPLEPNSLWHRIIKSKYGIDSNGWDTKQIDKVSCRNPWREISKGYN 900
Query: 61 LFLDLVNLKSAVAQKFGFEKIH--GHHMLLSLSNTLFYMPYLKKQR--LQSQTVGKLLQI 120
FL +K F + +L L L + KK + L + +++ +
Sbjct: 901 SFLQCCRFSVGNGEKIRFWEDFWLKEGILKDLFPRLSSLSRRKKSKRNLSEAEIAEVVIL 960
Query: 121 LGIWGRGGTFLTVRFLEVLSS*SILRLVGWEVVWTDLWEVDLFGTLNASVFLHLTQSRAQ 180
L I G +RL G WEV+ G+ + F S +
Sbjct: 961 LDILGN------------------VRLYGSRPDRRS-WEVEEQGSFSCKSFRSFLLSTTR 1019
Query: 181 SNTPVVDYTWENKVPMKV 240
P W+ K P K+
Sbjct: 1021 DVFPPFSSIWKAKTPPKI 1019
Query: 241 300
Sbjct: 1081 1019
Query: 301 360
Sbjct: 1141 1019
Query: 361 420
Sbjct: 1201 1019
Query: 421 480
Sbjct: 1261 1019
Query: 481 540
Sbjct: 1321 1019
Query: 541 583
Sbjct: 1381 1019
BLAST of MU62667 vs. NCBI nr
Match: gi|595974601|ref|XP_007217780.1| (hypothetical protein PRUPE_ppa020022mg, partial [Prunus persica]) HSP 1 Score: 60.1 bits (144), Expect = 5.1e-06 Identity = 29/78 (37.18%), Postives = 38/78 (48.72%), Query Frame = 1
Query: 1 KQRDSALLLKWFWQFSLQENSLGRRVIVVIYAI*SNGWLIKRPKMVASGRPWIYLEKNR* 60
++RD AL KW W+F L+ NSL R+I Y I SNGW K+ V+ PW + K
Sbjct: 993 RERDEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKQIDKVSCRNPWREISKGYN 1052
Query: 61 LFLDLVNLKSAVAQKFGF 120
FL +K F
Sbjct: 1053 SFLQCCRFSVGNGEKIRF 1070
Query: 121 180
Sbjct: 1113 1070
Query: 181 235
Sbjct: 1173 1070
The following BLAST results are available for this feature:
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
| Feature Name | Unique Name | Type |
|---|
| PEa0001E03 | PEa0001E03 | EST |
|
