MU62352 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU62352
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr8 : 1132152 .. 1149345 (+)
Sequence length	806

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ATCACCGCCTCTCTTCACTTCATTTCATACCCATTTCAACTTCTTTCTGAATCATTCCAATGGCTGCCTCTACAATGGCTCTTTCTTCTCCATCTCTGGCCGGCAAGGCCGTGAAGCTCTCCCCCAATGCCCCTGAAATTCAGGGAACTGGAAGAATCACCATGAGGAAAACTGCCACCAAGCCAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGCCACCATCCTACCTTACCGGAGAGTTCCCCGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCTGATCCCGAGACCTTCGCCAAGAACCGTGAGTTGGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGGTGTGTCTTCCCTGAGCTTTTGTCTCGCAATGGTGTGAAGTTTGGTGAAGCTGTGTGGTTCAAAGCTGGATCACAAATCTTCAGCGAAGGTGGGCTCGACTATTTGGGGAACCCAAGCTTGGTGCACGCGCAGAGTATTCTCGCCATTTGGGCTTGTCAAGTAGTGCTCATGGGAGCAGTGGAAGGATACAGAATTGCTGGGGGTCCGTTGGGTGAAATCACGGACCCGATTTACCCAGGTGGGAGCTTTGATCCATTGGGGCTGGCCGATGATCCAGAGGCATTTGCGGAATTGAAAGTGAAGGAGCTTAAGAATGGTAGATTGGCTATGTTTTCGATGTTCGGATTTTTCGTTCAAGCGATTGTAACTGGGGAAAGGCCATTGGAGAACTTGGCTGATCATTTGGCTGACCCT

Library


Library category	ESTs
melon MNCP2 library	1

Homology

[Close]

BLAST of MU62352 vs. Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 7.4e-133
Identity = 228/239 (95.40%), Postives = 232/239 (97.07%), Query Frame = 3


Query: 90  PSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGPFSGEPPSYLT 149
           P+LAG+AVKLSPNAPEIQG  + TMRKTA+K VSSGSPWYGPDRVKYLGPFSGEPPSYLT
Sbjct: 1   PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 60

Query: 150 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 209
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 210 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYP 269
           FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 270 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLENLADHLADP 329
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ PLENLADHLADP
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 239

Query: 330  389
           
Sbjct: 241  239

Query: 390  449
           
Sbjct: 301  239

Query: 450  509
           
Sbjct: 361  239

Query: 510  569
           
Sbjct: 421  239

Query: 570  629
           
Sbjct: 481  239

Query: 630  689
           
Sbjct: 541  239

Query: 690  749
           
Sbjct: 601  239

Query: 750  807
           
Sbjct: 661  239

[Close]

BLAST of MU62352 vs. Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 9.6e-133
Identity = 225/249 (90.36%), Postives = 237/249 (95.18%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 119
           MAA+TMALSSPS AG+AVKLSP+APEI G GR++MRKT  KPV+S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 120 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 179
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 180 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 239
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180

Query: 240 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLE 299
           LGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG+ PLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 300 NLADHLADP 359
           NLADHLADP
Sbjct: 241 NLADHLADP 249

Query: 360  419
           
Sbjct: 301  249

Query: 420  479
           
Sbjct: 361  249

Query: 480  539
           
Sbjct: 421  249

Query: 540  599
           
Sbjct: 481  249

Query: 600  659
           
Sbjct: 541  249

Query: 660  719
           
Sbjct: 601  249

Query: 720  779
           
Sbjct: 661  249

Query: 780  807
           
Sbjct: 721  249

[Close]

BLAST of MU62352 vs. Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 2.8e-132
Identity = 230/248 (92.74%), Postives = 237/248 (95.56%), Query Frame = 3


Query: 63  AASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGPF 122
           AAS+MALSSPSLAGKAVKL P+APE+   GR++MRKT TK VSSGSPWYGPDRVKYLGPF
Sbjct: 3   AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPF 62

Query: 123 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 182
           SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN
Sbjct: 63  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 122

Query: 183 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPL 242
           GVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPL
Sbjct: 123 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPL 182

Query: 243 GEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLEN 302
           GE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ PLEN
Sbjct: 183 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 242

Query: 303 LADHLADP 362
           LADHLA P
Sbjct: 243 LADHLAGP 247

Query: 363  422
           
Sbjct: 303  247

Query: 423  482
           
Sbjct: 363  247

Query: 483  542
           
Sbjct: 423  247

Query: 543  602
           
Sbjct: 483  247

Query: 603  662
           
Sbjct: 543  247

Query: 663  722
           
Sbjct: 603  247

Query: 723  782
           
Sbjct: 663  247

Query: 783  807
           
Sbjct: 723  247

[Close]

BLAST of MU62352 vs. Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 8.2e-132
Identity = 229/251 (91.24%), Postives = 236/251 (94.02%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATK--PVSSGSPWYGPDRVKYL 119
           MA STMALSS + AGKAVKLSP++ EI G GR+TMRKTATK  P SSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 120 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 179
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 180 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 239
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 240 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERP 299
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG+ P
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 300 LENLADHLADP 359
           LENLADHLADP
Sbjct: 241 LENLADHLADP 251

Query: 360  419
           
Sbjct: 301  251

Query: 420  479
           
Sbjct: 361  251

Query: 480  539
           
Sbjct: 421  251

Query: 540  599
           
Sbjct: 481  251

Query: 600  659
           
Sbjct: 541  251

Query: 660  719
           
Sbjct: 601  251

Query: 720  779
           
Sbjct: 661  251

Query: 780  807
           
Sbjct: 721  251

[Close]

BLAST of MU62352 vs. Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.1e-131
Identity = 228/251 (90.84%), Postives = 238/251 (94.82%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKP--VSSGSPWYGPDRVKYL 119
           MAASTMALSSPS AGKAVKLSP++ EI G G++TMRKTA+K   VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 120 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 179
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 180 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 239
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 240 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERP 299
           GPLGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG+ P
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 300 LENLADHLADP 359
           LENLADHLADP
Sbjct: 241 LENLADHLADP 251

Query: 360  419
           
Sbjct: 301  251

Query: 420  479
           
Sbjct: 361  251

Query: 480  539
           
Sbjct: 421  251

Query: 540  599
           
Sbjct: 481  251

Query: 600  659
           
Sbjct: 541  251

Query: 660  719
           
Sbjct: 601  251

Query: 720  779
           
Sbjct: 661  251

Query: 780  807
           
Sbjct: 721  251

[Close]

BLAST of MU62352 vs. TrEMBL
Match: A0A0A0KKK7_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_6G522680 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 8.5e-136
Identity = 238/249 (95.58%), Postives = 244/249 (97.99%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 119
           MAASTMALSSP+LAG+AVKLSPNAPEIQG  + TMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 120 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 179
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 180 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 239
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 240 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLE 299
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ PLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 300 NLADHLADP 359
           NLADHLADP
Sbjct: 241 NLADHLADP 249

Query: 360  419
           
Sbjct: 301  249

Query: 420  479
           
Sbjct: 361  249

Query: 480  539
           
Sbjct: 421  249

Query: 540  599
           
Sbjct: 481  249

Query: 600  659
           
Sbjct: 541  249

Query: 660  719
           
Sbjct: 601  249

Query: 720  779
           
Sbjct: 661  249

Query: 780  807
           
Sbjct: 721  249

[Close]

BLAST of MU62352 vs. TrEMBL
Match: A0A0A0KI21_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_6G522690 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 1.6e-134
Identity = 236/249 (94.78%), Postives = 242/249 (97.19%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 119
           MAAS MALSSP+LAG+AVKLSP APEIQG  + TMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPTLAGQAVKLSPTAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 120 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 179
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 180 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 239
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 240 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLE 299
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ PLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 300 NLADHLADP 359
           NLADHLADP
Sbjct: 241 NLADHLADP 249

Query: 360  419
           
Sbjct: 301  249

Query: 420  479
           
Sbjct: 361  249

Query: 480  539
           
Sbjct: 421  249

Query: 540  599
           
Sbjct: 481  249

Query: 600  659
           
Sbjct: 541  249

Query: 660  719
           
Sbjct: 601  249

Query: 720  779
           
Sbjct: 661  249

Query: 780  807
           
Sbjct: 721  249

[Close]

BLAST of MU62352 vs. TrEMBL
Match: A0A067L0C5_JATCU (Chlorophyll a-b binding protein, chloroplastic OS=Jatropha curcas GN=JCGZ_04588 PE=3 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 7.9e-134
Identity = 231/249 (92.77%), Postives = 242/249 (97.19%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 119
           MA STMALSSPSLAGKAVKL P+APE+ G GR+TMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSLAGKAVKLGPSAPELMGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGP 60

Query: 120 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 179
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 180 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 239
           NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGP 180

Query: 240 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLE 299
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG+ PLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 300 NLADHLADP 359
           NLADHLADP
Sbjct: 241 NLADHLADP 249

Query: 360  419
           
Sbjct: 301  249

Query: 420  479
           
Sbjct: 361  249

Query: 480  539
           
Sbjct: 421  249

Query: 540  599
           
Sbjct: 481  249

Query: 600  659
           
Sbjct: 541  249

Query: 660  719
           
Sbjct: 601  249

Query: 720  779
           
Sbjct: 661  249

Query: 780  807
           
Sbjct: 721  249

[Close]

BLAST of MU62352 vs. TrEMBL
Match: B9S155_RICCO (Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis GN=RCOM_0633890 PE=3 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 1.0e-133
Identity = 231/249 (92.77%), Postives = 241/249 (96.79%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 119
           MA STMALSSPS AGKAVKLSP+APE+ G GR++MRKTA K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKTAAKSVSSGSPWYGPDRVKYLGP 60

Query: 120 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 179
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 180 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 239
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGP 180

Query: 240 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLE 299
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG+ PLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 300 NLADHLADP 359
           NLADHLADP
Sbjct: 241 NLADHLADP 249

Query: 360  419
           
Sbjct: 301  249

Query: 420  479
           
Sbjct: 361  249

Query: 480  539
           
Sbjct: 421  249

Query: 540  599
           
Sbjct: 481  249

Query: 600  659
           
Sbjct: 541  249

Query: 660  719
           
Sbjct: 601  249

Query: 720  779
           
Sbjct: 661  249

Query: 780  807
           
Sbjct: 721  249

[Close]

BLAST of MU62352 vs. TrEMBL
Match: A0A0A0KGD7_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_6G139750 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 6.7e-133
Identity = 237/251 (94.42%), Postives = 242/251 (96.41%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTA--TKPVSSGSPWYGPDRVKYL 119
           MAAS+MALSSPS AG+AVKLSP A ++ G GRITMRKTA   KPVSSGSPWYGPDRVKYL
Sbjct: 1   MAASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 60

Query: 120 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 179
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 180 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 239
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 240 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERP 299
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ P
Sbjct: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 300 LENLADHLADP 359
           LENLADHLADP
Sbjct: 241 LENLADHLADP 251

Query: 360  419
           
Sbjct: 301  251

Query: 420  479
           
Sbjct: 361  251

Query: 480  539
           
Sbjct: 421  251

Query: 540  599
           
Sbjct: 481  251

Query: 600  659
           
Sbjct: 541  251

Query: 660  719
           
Sbjct: 601  251

Query: 720  779
           
Sbjct: 661  251

Query: 780  807
           
Sbjct: 721  251

[Close]

BLAST of MU62352 vs. TAIR10
Match: AT2G34430.1 (AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B1)

HSP 1 Score: 450.7 bits (1158), Expect = 6.4e-127
Identity = 222/250 (88.80%), Postives = 230/250 (92.00%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 119
           MAASTMALSSP+L GKAVKLSP A E+ GTGRITMRK +     SGSPWYG DRVKYLGP
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60

Query: 120 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 179
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 180 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-G 239
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180

Query: 240 PLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPL 299
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ PL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 300 ENLADHLADP 359
           ENLADHLADP
Sbjct: 241 ENLADHLADP 250

Query: 360  419
           
Sbjct: 301  250

Query: 420  479
           
Sbjct: 361  250

Query: 480  539
           
Sbjct: 421  250

Query: 540  599
           
Sbjct: 481  250

Query: 600  659
           
Sbjct: 541  250

Query: 660  719
           
Sbjct: 601  250

Query: 720  779
           
Sbjct: 661  250

Query: 780  807
           
Sbjct: 721  250

[Close]

BLAST of MU62352 vs. TAIR10
Match: AT1G29930.1 (AT1G29930.1 chlorophyll A/B binding protein 1)

HSP 1 Score: 448.7 bits (1153), Expect = 2.4e-126
Identity = 221/251 (88.05%), Postives = 231/251 (92.03%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVS-SGSPWYGPDRVKYLG 119
           MAASTMALSSP+ AGKAVKLSP A E+ G+GR+TMRKT  KP   SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 120 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 179
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 180 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 239
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 240 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERP 299
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ P
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 300 LENLADHLADP 359
           +ENLADHLADP
Sbjct: 241 IENLADHLADP 251

Query: 360  419
           
Sbjct: 301  251

Query: 420  479
           
Sbjct: 361  251

Query: 480  539
           
Sbjct: 421  251

Query: 540  599
           
Sbjct: 481  251

Query: 600  659
           
Sbjct: 541  251

Query: 660  719
           
Sbjct: 601  251

Query: 720  779
           
Sbjct: 661  251

Query: 780  807
           
Sbjct: 721  251

[Close]

BLAST of MU62352 vs. TAIR10
Match: AT1G29920.1 (AT1G29920.1 chlorophyll A/B-binding protein 2)

HSP 1 Score: 446.8 bits (1148), Expect = 9.3e-126
Identity = 220/251 (87.65%), Postives = 230/251 (91.63%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVS-SGSPWYGPDRVKYLG 119
           MAASTMALSSP+ AGKAV LSP A E+ G+GR+TMRKT  KP   SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 120 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 179
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 180 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 239
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 240 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERP 299
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ P
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 300 LENLADHLADP 359
           +ENLADHLADP
Sbjct: 241 IENLADHLADP 251

Query: 360  419
           
Sbjct: 301  251

Query: 420  479
           
Sbjct: 361  251

Query: 480  539
           
Sbjct: 421  251

Query: 540  599
           
Sbjct: 481  251

Query: 600  659
           
Sbjct: 541  251

Query: 660  719
           
Sbjct: 601  251

Query: 720  779
           
Sbjct: 661  251

Query: 780  807
           
Sbjct: 721  251

[Close]

BLAST of MU62352 vs. TAIR10
Match: AT1G29910.1 (AT1G29910.1 chlorophyll A/B binding protein 3)

HSP 1 Score: 446.8 bits (1148), Expect = 9.3e-126
Identity = 220/251 (87.65%), Postives = 230/251 (91.63%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVS-SGSPWYGPDRVKYLG 119
           MAASTMALSSP+ AGKAV LSP A E+ G+GR+TMRKT  KP   SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 120 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 179
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 180 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 239
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 240 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERP 299
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ P
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 300 LENLADHLADP 359
           +ENLADHLADP
Sbjct: 241 IENLADHLADP 251

Query: 360  419
           
Sbjct: 301  251

Query: 420  479
           
Sbjct: 361  251

Query: 480  539
           
Sbjct: 421  251

Query: 540  599
           
Sbjct: 481  251

Query: 600  659
           
Sbjct: 541  251

Query: 660  719
           
Sbjct: 601  251

Query: 720  779
           
Sbjct: 661  251

Query: 780  807
           
Sbjct: 721  251

[Close]

BLAST of MU62352 vs. TAIR10
Match: AT2G34420.1 (AT2G34420.1 photosystem II light harvesting complex gene B1B2)

HSP 1 Score: 442.2 bits (1136), Expect = 2.3e-124
Identity = 219/251 (87.25%), Postives = 230/251 (91.63%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVS-SGSPWYGPDRVKYLG 119
           MA+STMALSSP+ AGKAVK  P A ++ G+GR+TMRKT  KP   SGSPWYG DRVKYLG
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 120 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 179
           PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 180 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 239
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180

Query: 240 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERP 299
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ P
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 300 LENLADHLADP 359
           LENLADHLADP
Sbjct: 241 LENLADHLADP 249

Query: 360  419
           
Sbjct: 301  249

Query: 420  479
           
Sbjct: 361  249

Query: 480  539
           
Sbjct: 421  249

Query: 540  599
           
Sbjct: 481  249

Query: 600  659
           
Sbjct: 541  249

Query: 660  719
           
Sbjct: 601  249

Query: 720  779
           
Sbjct: 661  249

Query: 780  807
           
Sbjct: 721  249

[Close]

BLAST of MU62352 vs. NCBI nr
Match: gi|659078308|ref|XP_008439658.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo])

HSP 1 Score: 506.9 bits (1304), Expect = 2.1e-140
Identity = 245/249 (98.39%), Postives = 248/249 (99.60%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 119
           MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 60

Query: 120 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 179
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 180 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 239
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 240 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLE 299
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ PLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 300 NLADHLADP 359
           NLADHL+DP
Sbjct: 241 NLADHLSDP 249

Query: 360  419
           
Sbjct: 301  249

Query: 420  479
           
Sbjct: 361  249

Query: 480  539
           
Sbjct: 421  249

Query: 540  599
           
Sbjct: 481  249

Query: 600  659
           
Sbjct: 541  249

Query: 660  719
           
Sbjct: 601  249

Query: 720  779
           
Sbjct: 661  249

Query: 780  807
           
Sbjct: 721  249

[Close]

BLAST of MU62352 vs. NCBI nr
Match: gi|659078310|ref|XP_008439659.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo])

HSP 1 Score: 505.0 bits (1299), Expect = 8.2e-140
Identity = 245/249 (98.39%), Postives = 247/249 (99.20%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 119
           MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATK VSSGSPWYGPDRVKYLGP
Sbjct: 74  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKSVSSGSPWYGPDRVKYLGP 133

Query: 120 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 179
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 134 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 193

Query: 180 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 239
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 194 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 253

Query: 240 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLE 299
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ PLE
Sbjct: 254 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 313

Query: 300 NLADHLADP 359
           NLADHLADP
Sbjct: 314 NLADHLADP 322

Query: 360  419
           
Sbjct: 374  322

Query: 420  479
           
Sbjct: 434  322

Query: 480  539
           
Sbjct: 494  322

Query: 540  599
           
Sbjct: 554  322

Query: 600  659
           
Sbjct: 614  322

Query: 660  719
           
Sbjct: 674  322

Query: 720  779
           
Sbjct: 734  322

Query: 780  807
           
Sbjct: 794  322

[Close]

BLAST of MU62352 vs. NCBI nr
Match: gi|778721313|ref|XP_011658281.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic [Cucumis sativus])

HSP 1 Score: 493.8 bits (1270), Expect = 1.9e-136
Identity = 238/249 (95.58%), Postives = 244/249 (97.99%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 119
           MAASTMALSSP+LAG+AVKLSPNAPEIQG  + TMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 120 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 179
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 180 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 239
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 240 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLE 299
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ PLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 300 NLADHLADP 359
           NLADHLADP
Sbjct: 241 NLADHLADP 249

Query: 360  419
           
Sbjct: 301  249

Query: 420  479
           
Sbjct: 361  249

Query: 480  539
           
Sbjct: 421  249

Query: 540  599
           
Sbjct: 481  249

Query: 600  659
           
Sbjct: 541  249

Query: 660  719
           
Sbjct: 601  249

Query: 720  779
           
Sbjct: 661  249

Query: 780  807
           
Sbjct: 721  249

[Close]

BLAST of MU62352 vs. NCBI nr
Match: gi|778721319|ref|XP_004134608.2| (PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 3.5e-135
Identity = 236/249 (94.78%), Postives = 242/249 (97.19%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 119
           MAAS MALSSP+LAG+AVKLSP APEIQG  + TMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPTLAGQAVKLSPTAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 120 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 179
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 180 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 239
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 240 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLE 299
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG+ PLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 300 NLADHLADP 359
           NLADHLADP
Sbjct: 241 NLADHLADP 249

Query: 360  419
           
Sbjct: 301  249

Query: 420  479
           
Sbjct: 361  249

Query: 480  539
           
Sbjct: 421  249

Query: 540  599
           
Sbjct: 481  249

Query: 600  659
           
Sbjct: 541  249

Query: 660  719
           
Sbjct: 601  249

Query: 720  779
           
Sbjct: 661  249

Query: 780  807
           
Sbjct: 721  249

[Close]

BLAST of MU62352 vs. NCBI nr
Match: gi|802596137|ref|XP_012072080.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Jatropha curcas])

HSP 1 Score: 487.3 bits (1253), Expect = 1.8e-134
Identity = 231/249 (92.77%), Postives = 242/249 (97.19%), Query Frame = 3


Query: 60  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 119
           MA STMALSSPSLAGKAVKL P+APE+ G GR+TMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSLAGKAVKLGPSAPELMGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGP 60

Query: 120 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 179
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 180 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 239
           NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGP 180

Query: 240 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGERPLE 299
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG+ PLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 300 NLADHLADP 359
           NLADHLADP
Sbjct: 241 NLADHLADP 249

Query: 360  419
           
Sbjct: 301  249

Query: 420  479
           
Sbjct: 361  249

Query: 480  539
           
Sbjct: 421  249

Query: 540  599
           
Sbjct: 481  249

Query: 600  659
           
Sbjct: 541  249

Query: 660  719
           
Sbjct: 601  249

Query: 720  779
           
Sbjct: 661  249

Query: 780  807
           
Sbjct: 721  249

The following BLAST results are available for this feature:

BLAST of MU62352 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CB21_CUCSA	7.4e-133	95.40	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
CB22_TOBAC	9.6e-133	90.36	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 ...	[more]
CB23_SOYBN	2.8e-132	92.74	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=...	[more]
CB2G_SOLLC	8.2e-132	91.24	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB...	[more]
CB24_TOBAC	1.1e-131	90.84	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 ...	[more]

BLAST of MU62352 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKK7_CUCSA	8.5e-136	95.58	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_6G52268...	[more]
A0A0A0KI21_CUCSA	1.6e-134	94.78	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_6G52269...	[more]
A0A067L0C5_JATCU	7.9e-134	92.77	Chlorophyll a-b binding protein, chloroplastic OS=Jatropha curcas GN=JCGZ_04588 ...	[more]
B9S155_RICCO	1.0e-133	92.77	Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis GN=RCOM_06338...	[more]
A0A0A0KGD7_CUCSA	6.7e-133	94.42	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_6G13975...	[more]

BLAST of MU62352 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34430.1	6.4e-127	88.80	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29930.1	2.4e-126	88.05	chlorophyll A/B binding protein 1	[more]
AT1G29920.1	9.3e-126	87.65	chlorophyll A/B-binding protein 2	[more]
AT1G29910.1	9.3e-126	87.65	chlorophyll A/B binding protein 3	[more]
AT2G34420.1	2.3e-124	87.25	photosystem II light harvesting complex gene B1B2	[more]

BLAST of MU62352 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659078308\|ref\|XP_008439658.1\|	2.1e-140	98.39	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo]	[more]
gi\|659078310\|ref\|XP_008439659.1\|	8.2e-140	98.39	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo]	[more]
gi\|778721313\|ref\|XP_011658281.1\|	1.9e-136	95.58	PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic [Cucum...	[more]
gi\|778721319\|ref\|XP_004134608.2\|	3.5e-135	94.78	PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like [...	[more]
gi\|802596137\|ref\|XP_012072080.1\|	1.8e-134	92.77	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR022796	Chloroa_b-bind
IPR023329	Chlorophyll_a/b-bd_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0009765	photosynthesis, light harvesting

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0016020	membrane

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C007150	MELO3C007150	gene
MELO3C007151	MELO3C007151	gene
MELO3C007153	MELO3C007153	gene
MELO3C007152	MELO3C007152	gene
MELO3C007154	MELO3C007154	gene
MELO3C007149	MELO3C007149	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
KA6YN10FM1	KA6YN10FM1	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..244 score: 3.1E
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 60..226 score: 1.4
IPR023329	Chlorophyll a/b binding protein domain	GENE3D	G3DSA:1.10.3460.10		coord: 53..244 score: 1.0
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 43..244 score: 1.27
None	No IPR available	PANTHER	PTHR21649:SF26	CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 1..244 score: 3.1E