MU61906 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU61906
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Glutaredoxin-like protein
Location	chr7 : 8668169 .. 8672845 (-)
Sequence length	588

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AGTGGCAAGAACCAAACTCCGAAATTGGAAGCAAGAATGATATCTACAACTGCTGCGAGAATAGGGCGACCTTCTTCTTCACCGTTATCACTACTCTTGAAACCTCATACTTCTCGCCCGATTCTGACTCCATCTGCTTCATTTTCCTCTTCTCTTCCCTCTCGCAAACTCATTCTCTACTCCAAACCCGGATGCTGTTTGTGCGATGGCCTCAAAGAGAAACTACACGCCGCCTTTCTCCTCTCCGGCCCCGATTCTCTACACGACGTCCAATTACAGGTGAGGGATATCACTACTAACCCTGAATGGGAGAGAGCTTACCAGTATGAGATTCCTGTGCTTGCGAAAGTCCGCTCTGATGGCTCGGAGGAAGTGCTTCCTCGGCTATCTCCTCGTTTGGGGGTGGAGTTTGTTCAGAAGAAACTGGCAGCAGCCTTACAGTAGGAGGCAAGCATTATTGTTCTTTAATTAAAATTCTTATCTCCACACGCTGTGTTGTAATAAAACAAATTATAAATATTTTATTCCATAACTTGTGATAAAAGACAAGGGCCCATTGATATATCGTGTGGCTTCTTTTTCTTCAAG

Library


Library category	ESTs
melon HS library	1

Homology

[Close]

BLAST of MU61906 vs. TrEMBL
Match: A0A0A0L383_CUCSA (Glutaredoxin-like protein OS=Cucumis sativus GN=Csa_4G365550 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.9e-48
Identity = 101/126 (80.16%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 37  MISTTAARIGRXXXXXXXXXXKPHTSRPILTPXXXXXXXXXXRKLILYSKPGCCLCDGLK 96
           MIS+TAA+IGR          KP TSR ILTP          RKLILYSKPGCCLCDGLK
Sbjct: 1   MISSTAAKIGRPSSSPLSLLLKPQTSRRILTPSASFSSSLPSRKLILYSKPGCCLCDGLK 60

Query: 97  EKLHAAFLLSGPDSLHDVQLQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPRLSPR 156
           EKLHAAFLLSGPDSLHDV LQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPRLSPR
Sbjct: 61  EKLHAAFLLSGPDSLHDVHLQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPRLSPR 120

Query: 157 LGVEFV 216
           LGVEFV
Sbjct: 121 LGVEFV 126

Query: 217  276
           
Sbjct: 181  126

Query: 277  336
           
Sbjct: 241  126

Query: 337  396
           
Sbjct: 301  126

Query: 397  415
           
Sbjct: 361  126

[Close]

BLAST of MU61906 vs. TrEMBL
Match: A0A0B0P5U7_GOSAR (Glutaredoxin-like protein OS=Gossypium arboreum GN=F383_26159 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.3e-36
Identity = 76/98 (77.55%), Postives = 82/98 (83.67%), Query Frame = 1


Query: 121 ILTPXXXXXXXXXXRKLILYSKPGCCLCDGLKEKLHAAFLLSGPDSLHDVQLQVRDITTN 180
           + +P          RKL+LYSKPGCCLCDGLKEKLHAAF LSGPD LHDV LQVRDIT+N
Sbjct: 27  VFSPLSFCSSESKPRKLVLYSKPGCCLCDGLKEKLHAAFSLSGPDPLHDVVLQVRDITSN 86

Query: 181 PEWERAYQYEIPVLAKVRSDGSEEVLPRLSPRLGVEFV 240
           PEWE+AYQYEIPVLAKV SDGSEE+LPRLSPRLGVE V
Sbjct: 87  PEWEKAYQYEIPVLAKVLSDGSEEILPRLSPRLGVELV 124

Query: 241  300
           
Sbjct: 147  124

Query: 301  360
           
Sbjct: 207  124

Query: 361  415
           
Sbjct: 267  124

[Close]

BLAST of MU61906 vs. TrEMBL
Match: A0A0D2TQT8_GOSRA (Glutaredoxin-like protein OS=Gossypium raimondii GN=B456_009G244600 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.3e-36
Identity = 76/98 (77.55%), Postives = 82/98 (83.67%), Query Frame = 1


Query: 121 ILTPXXXXXXXXXXRKLILYSKPGCCLCDGLKEKLHAAFLLSGPDSLHDVQLQVRDITTN 180
           + +P          RKL+LYSKPGCCLCDGLKEKLHAAF LSGPD LHDV LQVRDIT+N
Sbjct: 27  VFSPLSFCSSPSKPRKLVLYSKPGCCLCDGLKEKLHAAFSLSGPDPLHDVVLQVRDITSN 86

Query: 181 PEWERAYQYEIPVLAKVRSDGSEEVLPRLSPRLGVEFV 240
           PEWE+AYQYEIPVLAKV SDGSEE+LPRLSPRLGVE V
Sbjct: 87  PEWEKAYQYEIPVLAKVLSDGSEEILPRLSPRLGVELV 124

Query: 241  300
           
Sbjct: 147  124

Query: 301  360
           
Sbjct: 207  124

Query: 361  415
           
Sbjct: 267  124

[Close]

BLAST of MU61906 vs. TrEMBL
Match: A0A059BWU2_EUCGR (Glutaredoxin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_F03776 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 9.5e-36
Identity = 74/84 (88.10%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 163 RKLILYSKPGCCLCDGLKEKLHAAFLLSGPDSLHDVQLQVRDITTNPEWERAYQYEIPVL 222
           RKL+LYSKPGCCLCDGLKEKL AAFL+SGPDSL DV LQVRDIT+NPEWERAYQYEIPVL
Sbjct: 48  RKLVLYSKPGCCLCDGLKEKLQAAFLISGPDSLQDVDLQVRDITSNPEWERAYQYEIPVL 107

Query: 223 AKVRSDGSEEVLPRLSPRLGVEFV 282
           AKV SDGSEE+LPRLSPRLGVE +
Sbjct: 108 AKVLSDGSEEILPRLSPRLGVELI 131

Query: 283  342
           
Sbjct: 168  131

Query: 343  402
           
Sbjct: 228  131

Query: 403  415
           
Sbjct: 288  131

[Close]

BLAST of MU61906 vs. TrEMBL
Match: A0A059BY56_EUCGR (Glutaredoxin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_F03773 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 9.5e-36
Identity = 74/84 (88.10%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 163 RKLILYSKPGCCLCDGLKEKLHAAFLLSGPDSLHDVQLQVRDITTNPEWERAYQYEIPVL 222
           RKL+LYSKPGCCLCDGLKEKL AAFL+SGPDSL DV LQVRDIT+NPEWERAYQYEIPVL
Sbjct: 48  RKLVLYSKPGCCLCDGLKEKLQAAFLISGPDSLQDVDLQVRDITSNPEWERAYQYEIPVL 107

Query: 223 AKVRSDGSEEVLPRLSPRLGVEFV 282
           AKV SDGSEE+LPRLSPRLGVE +
Sbjct: 108 AKVLSDGSEEILPRLSPRLGVELI 131

Query: 283  342
           
Sbjct: 168  131

Query: 343  402
           
Sbjct: 228  131

Query: 403  415
           
Sbjct: 288  131

[Close]

BLAST of MU61906 vs. TAIR10
Match: AT4G08280.1 (AT4G08280.1 Thioredoxin superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.0e-36
Identity = 73/85 (85.88%), Postives = 74/85 (87.06%), Query Frame = 1


Query: 163 RKLILYSKPGCCLCDGLKEKLHAAFLLS-GPDSLHDVQLQVRDITTNPEWERAYQYEIPV 222
           RKL+LYSKPGCCLCDGLKEKLHAAF LS GPDSL+DV LQVRDITTNPEWERAYQYEIPV
Sbjct: 33  RKLVLYSKPGCCLCDGLKEKLHAAFTLSTGPDSLNDVTLQVRDITTNPEWERAYQYEIPV 92

Query: 223 LAKVRSDGSEEVLPRLSPRLGVEFV 282
           LAK  SDG EEVLPRLSPRL  E +
Sbjct: 93  LAKENSDGKEEVLPRLSPRLSAELI 117

Query: 283  342
           
Sbjct: 153  117

Query: 343  402
           
Sbjct: 213  117

Query: 403  415
           
Sbjct: 273  117

[Close]

BLAST of MU61906 vs. NCBI nr
Match: gi|659086850|ref|XP_008444142.1| (PREDICTED: uncharacterized protein LOC103487576 isoform X2 [Cucumis melo])

HSP 1 Score: 210.3 bits (534), Expect = 3.0e-51
Identity = 105/126 (83.33%), Postives = 105/126 (83.33%), Query Frame = 1


Query: 37  MISTTAARIGRXXXXXXXXXXKPHTSRPILTPXXXXXXXXXXRKLILYSKPGCCLCDGLK 96
           MISTTAARIGR          KPHTSRPILTP          RKLILYSKPGCCLCDGLK
Sbjct: 1   MISTTAARIGRPSSSPLSLLLKPHTSRPILTPSASFSSSLPSRKLILYSKPGCCLCDGLK 60

Query: 97  EKLHAAFLLSGPDSLHDVQLQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPRLSPR 156
           EKLHAAFLLSGPDSLHDV LQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPRLSPR
Sbjct: 61  EKLHAAFLLSGPDSLHDVHLQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPRLSPR 120

Query: 157 LGVEFV 216
           LGVEFV
Sbjct: 121 LGVEFV 126

Query: 217  276
           
Sbjct: 181  126

Query: 277  336
           
Sbjct: 241  126

Query: 337  396
           
Sbjct: 301  126

Query: 397  415
           
Sbjct: 361  126

[Close]

BLAST of MU61906 vs. NCBI nr
Match: gi|778694434|ref|XP_011653807.1| (PREDICTED: uncharacterized protein LOC101215760 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 1.8e-48
Identity = 101/126 (80.16%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 37  MISTTAARIGRXXXXXXXXXXKPHTSRPILTPXXXXXXXXXXRKLILYSKPGCCLCDGLK 96
           MIS+TAA+IGR          KP TSR ILTP          RKLILYSKPGCCLCDGLK
Sbjct: 1   MISSTAAKIGRPSSSPLSLLLKPQTSRRILTPSASFSSSLPSRKLILYSKPGCCLCDGLK 60

Query: 97  EKLHAAFLLSGPDSLHDVQLQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPRLSPR 156
           EKLHAAFLLSGPDSLHDV LQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPRLSPR
Sbjct: 61  EKLHAAFLLSGPDSLHDVHLQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPRLSPR 120

Query: 157 LGVEFV 216
           LGVEFV
Sbjct: 121 LGVEFV 126

Query: 217  276
           
Sbjct: 181  126

Query: 277  336
           
Sbjct: 241  126

Query: 337  396
           
Sbjct: 301  126

Query: 397  415
           
Sbjct: 361  126

[Close]

BLAST of MU61906 vs. NCBI nr
Match: gi|659086852|ref|XP_008444143.1| (PREDICTED: uncharacterized protein LOC103487576 isoform X3 [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 2.3e-43
Identity = 91/115 (79.13%), Postives = 92/115 (80.00%), Query Frame = 1


Query: 37  MISTTAARIGRXXXXXXXXXXKPHTSRPILTPXXXXXXXXXXRKLILYSKPGCCLCDGLK 96
           MISTTAARIGR          KPHTSRPILTP          RKLILYSKPGCCLCDGLK
Sbjct: 1   MISTTAARIGRPSSSPLSLLLKPHTSRPILTPSASFSSSLPSRKLILYSKPGCCLCDGLK 60

Query: 97  EKLHAAFLLSGPDSLHDVQLQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLP 156
           EKLHAAFLLSGPDSLHDV LQVRDITTNPEWERAYQYEIPVLAKVRSDGSE  +P
Sbjct: 61  EKLHAAFLLSGPDSLHDVHLQVRDITTNPEWERAYQYEIPVLAKVRSDGSERPIP 115

Query: 157  216
           
Sbjct: 121  115

Query: 217  276
           
Sbjct: 181  115

Query: 277  336
           
Sbjct: 241  115

Query: 337  382
           
Sbjct: 301  115

[Close]

BLAST of MU61906 vs. NCBI nr
Match: gi|659086848|ref|XP_008444141.1| (PREDICTED: uncharacterized protein LOC103487576 isoform X1 [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-42
Identity = 90/111 (81.08%), Postives = 90/111 (81.08%), Query Frame = 1


Query: 37  MISTTAARIGRXXXXXXXXXXKPHTSRPILTPXXXXXXXXXXRKLILYSKPGCCLCDGLK 96
           MISTTAARIGR          KPHTSRPILTP          RKLILYSKPGCCLCDGLK
Sbjct: 1   MISTTAARIGRPSSSPLSLLLKPHTSRPILTPSASFSSSLPSRKLILYSKPGCCLCDGLK 60

Query: 97  EKLHAAFLLSGPDSLHDVQLQVRDITTNPEWERAYQYEIPVLAKVRSDGSE 156
           EKLHAAFLLSGPDSLHDV LQVRDITTNPEWERAYQYEIPVLAKVRSDGSE
Sbjct: 61  EKLHAAFLLSGPDSLHDVHLQVRDITTNPEWERAYQYEIPVLAKVRSDGSE 111

Query: 157  216
           
Sbjct: 121  111

Query: 217  276
           
Sbjct: 181  111

Query: 277  336
           
Sbjct: 241  111

Query: 337  370
           
Sbjct: 301  111

[Close]

BLAST of MU61906 vs. NCBI nr
Match: gi|1012216983|ref|XP_015934712.1| (PREDICTED: uncharacterized protein LOC107460816 [Arachis duranensis])

HSP 1 Score: 162.5 bits (410), Expect = 7.3e-37
Identity = 75/84 (89.29%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 163 RKLILYSKPGCCLCDGLKEKLHAAFLLSGPDSLHDVQLQVRDITTNPEWERAYQYEIPVL 222
           RKL+LYSKPGCCLC+GLKEKL AAFLLSGPDSLHDVQLQ+RDITTNP+WERAYQYEIPVL
Sbjct: 50  RKLVLYSKPGCCLCEGLKEKLQAAFLLSGPDSLHDVQLQIRDITTNPQWERAYQYEIPVL 109

Query: 223 AKVRSDGSEEVLPRLSPRLGVEFV 282
           AKV SDG+EE LPRLSPRLGVE V
Sbjct: 110 AKVLSDGTEETLPRLSPRLGVELV 133

Query: 283  342
           
Sbjct: 170  133

Query: 343  402
           
Sbjct: 230  133

Query: 403  415
           
Sbjct: 290  133

The following BLAST results are available for this feature:

BLAST of MU61906 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L383_CUCSA	4.9e-48	80.16	Glutaredoxin-like protein OS=Cucumis sativus GN=Csa_4G365550 PE=3 SV=1	[more]
A0A0B0P5U7_GOSAR	3.3e-36	77.55	Glutaredoxin-like protein OS=Gossypium arboreum GN=F383_26159 PE=3 SV=1	[more]
A0A0D2TQT8_GOSRA	3.3e-36	77.55	Glutaredoxin-like protein OS=Gossypium raimondii GN=B456_009G244600 PE=3 SV=1	[more]
A0A059BWU2_EUCGR	9.5e-36	88.10	Glutaredoxin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_F03776 PE=3 SV=1	[more]
A0A059BY56_EUCGR	9.5e-36	88.10	Glutaredoxin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_F03773 PE=3 SV=1	[more]

BLAST of MU61906 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08280.1	1.0e-36	85.88	Thioredoxin superfamily protein	[more]

BLAST of MU61906 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086850\|ref\|XP_008444142.1\|	3.0e-51	83.33	PREDICTED: uncharacterized protein LOC103487576 isoform X2 [Cucumis melo]	[more]
gi\|778694434\|ref\|XP_011653807.1\|	1.8e-48	80.16	PREDICTED: uncharacterized protein LOC101215760 [Cucumis sativus]	[more]
gi\|659086852\|ref\|XP_008444143.1\|	2.3e-43	79.13	PREDICTED: uncharacterized protein LOC103487576 isoform X3 [Cucumis melo]	[more]
gi\|659086848\|ref\|XP_008444141.1\|	1.2e-42	81.08	PREDICTED: uncharacterized protein LOC103487576 isoform X1 [Cucumis melo]	[more]
gi\|1012216983\|ref\|XP_015934712.1\|	7.3e-37	89.29	PREDICTED: uncharacterized protein LOC107460816 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR008554	Glutaredoxin-like
IPR012336	Thioredoxin-like_fold

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C010470	MELO3C010470	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
HS39B05	HS39B05	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008554	Glutaredoxin-like	PFAM	PF05768	DUF836	coord: 56..142 score: 4.0
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 56..145 score: 1.0
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 51..126 score: 6.94
None	No IPR available	unknown	Coil	Coil	coord: 135..147 scor
None	No IPR available	PANTHER	PTHR33558	FAMILY NOT NAMED	coord: 7..147 score: 5.2