MU61605 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU61605
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTranslation initiation factor IF-2 family protein
Locationchr7 : 7157622 .. 7158761 (-)
Sequence length568
The following sequences are available for this feature:

transcribed_cluster sequence

CATTCGGGTTCTGCGAAAGGGTAAAACGGCATATACTGGCCAACTTGATTCACTGCGTCGGGTTAAAGAAATCGTGAAAGAGGTAAACGCTGGCTTAGAATGTGGAGTTGGAATGGAGGACTACGATGATTGGGAGGTGGGGGATGTACTAGAGGCATTCGATACAGTTCAAAAGAAGCGGACACTAGAAGAGGCCTCGGCTTCAATGGCAACTGCGTTGGAGAAAGCTGGAATTGACTTGTAAAGAACCCCAGTAAATTGCCAGACCAACCTAGACCATATAGCCTCTTTTGATAATGAAATGACAGTGCCTTCTGCAATGCTTTGGCTGCCATTTTTTGTCCAGCCAATGTTCAACGATTCTGAGGGCCTGTCATTGTTTTGTGAATCACTTGAGGAGCAGGGTAGCACCGAGAAACTGCGATTTTAACTACCAGCTGGTTGGGCTGTAAATAGTCAATACGTGTATTAGATCTCCGATTCTTATTGTAAAGAGGAAAACTGTTCTTTGATTCTGAATGCCTGAGTGTTCAAACAGAGAACACTGCATGATAATGGAAGAAATTTC
Library categoryESTs
melon HS library1
BLAST of MU61605 vs. Swiss-Prot
Match: IF2C_ARATH (Translation initiation factor IF-2, chloroplastic OS=Arabidopsis thaliana GN=At1g17220 PE=2 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-26
Identity = 56/78 (71.79%), Postives = 68/78 (87.18%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            IRV+RKGKT + G LDSL+RVKE VKEV+AGLECG+GM+DYDDW  GD++EAF+ VQK+R
Sbjct: 949  IRVVRKGKTVHVGVLDSLKRVKENVKEVSAGLECGIGMDDYDDWIEGDIIEAFNAVQKRR 1008

Query: 62   TLEEASASMATALEKAGI 121
            TLEEASASM+ A+E+AG+
Sbjct: 1009 TLEEASASMSAAIEEAGV 1026

Query: 122  181
            
Sbjct: 1069 1026

Query: 182  236
            
Sbjct: 1129 1026

BLAST of MU61605 vs. Swiss-Prot
Match: IF2C_PHAVU (Translation initiation factor IF-2, chloroplastic OS=Phaseolus vulgaris GN=IF2CP PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.0e-16
Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            IRV RKGK  + G +DSLRRVKEIVKEVNAGLECG+G+ED+DDWE GD++E    ++++ 
Sbjct: 938  IRVKRKGKIVHVGIIDSLRRVKEIVKEVNAGLECGLGLEDFDDWEEGDIIEPSTQLRRRG 997

Query: 62   TLE 121
             L+
Sbjct: 998  PLK 1000

Query: 122  181
            
Sbjct: 1058 1000

Query: 182  191
            
Sbjct: 1118 1000

BLAST of MU61605 vs. Swiss-Prot
Match: IF2_NOSP7 (Translation initiation factor IF-2 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=infB PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.9e-14
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            +RV R GK  Y G LDSL+R+KE  +EVNAG ECGVGM+ ++DW  GD++E++  V K+R
Sbjct: 991  VRVRRGGKVIYEGVLDSLKRMKEDAREVNAGYECGVGMDKFNDWVEGDIIESYQMVTKRR 1050

Query: 62   TL 121
            TL
Sbjct: 1051 TL 1052

Query: 122  181
            
Sbjct: 1111 1052

Query: 182  188
            
Sbjct: 1171 1052

BLAST of MU61605 vs. Swiss-Prot
Match: IF2_CYAP7 (Translation initiation factor IF-2 OS=Cyanothece sp. (strain PCC 7424) GN=infB PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.4e-14
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            +RV RKG+  Y G LDSL+R+KE  +EVNAG ECG+G+  ++DW+ GD +E F+ V K+R
Sbjct: 1037 LRVRRKGEVIYEGVLDSLKRMKEDAREVNAGYECGIGVSKFNDWQEGDSIEVFEMVMKRR 1096

Query: 62   TL 121
            TL
Sbjct: 1097 TL 1098

Query: 122  181
            
Sbjct: 1157 1098

Query: 182  188
            
Sbjct: 1217 1098

BLAST of MU61605 vs. Swiss-Prot
Match: IF2_CHLL7 (Translation initiation factor IF-2 OS=Chlorobium luteolum (strain DSM 273 / 2530) GN=infB PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.3e-14
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 2

Query: 2   IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
           +R+LR G   Y G LD+LRR K+ VKEV+AG ECGVG+++YDD +VGDV+EA+  V+KKR
Sbjct: 854 VRLLRDGVQIYDGMLDTLRRFKDDVKEVDAGYECGVGLKNYDDIKVGDVVEAYRIVEKKR 913

Query: 62  TL 121
            L
Sbjct: 914 KL 915

Query: 122 181
           
Sbjct: 974 915

Query: 182 188
           
Sbjct: 1034 915

BLAST of MU61605 vs. TrEMBL
Match: A0A0A0L611_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G675260 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.0e-34
Identity = 76/80 (95.00%), Postives = 78/80 (97.50%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            I+VLRKGK AYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGD +EAFDTVQKKR
Sbjct: 944  IQVLRKGKIAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDAIEAFDTVQKKR 1003

Query: 62   TLEEASASMATALEKAGIDL 121
            TLEEASASMATALEKAGIDL
Sbjct: 1004 TLEEASASMATALEKAGIDL 1023

Query: 122  181
            
Sbjct: 1064 1023

Query: 182  241
            
Sbjct: 1124 1023

BLAST of MU61605 vs. TrEMBL
Match: A0A059BN76_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01432 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-27
Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = 2

Query: 2   IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
           IRV+RKGKTAY G LDSLRRVKEIVKEV  GLECG+GMEDYDDWE GD++EAF+TV+K+R
Sbjct: 910 IRVVRKGKTAYVGILDSLRRVKEIVKEVGTGLECGIGMEDYDDWEEGDIVEAFNTVEKRR 969

Query: 62  TLEEASASMATALEKAGIDL 121
           TLEEASASM  ALE  GI L
Sbjct: 970 TLEEASASMTAALEDVGIKL 989

Query: 122 181
           
Sbjct: 1030 989

Query: 182 241
           
Sbjct: 1090 989

BLAST of MU61605 vs. TrEMBL
Match: A0A059BN83_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01437 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-27
Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            IRV+RKGKTAY G LDSLRRVKEIVKEV  GLECG+GMEDYDDWE GD++EAF+TV+K+R
Sbjct: 945  IRVVRKGKTAYVGILDSLRRVKEIVKEVGVGLECGIGMEDYDDWEEGDIVEAFNTVEKRR 1004

Query: 62   TLEEASASMATALEKAGIDL 121
            TLEEASASM  ALE  GI L
Sbjct: 1005 TLEEASASMTAALEDVGIKL 1024

Query: 122  181
            
Sbjct: 1065 1024

Query: 182  241
            
Sbjct: 1125 1024

BLAST of MU61605 vs. TrEMBL
Match: M5X751_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000701mg PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.0e-27
Identity = 61/80 (76.25%), Postives = 72/80 (90.00%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            ++V+R+GK  + G LDSL+RVKEIVKEVNAGLECG+G+EDYDDWE GD+LEAF+TVQKKR
Sbjct: 950  VQVIRRGKVVHVGLLDSLKRVKEIVKEVNAGLECGIGVEDYDDWEEGDILEAFNTVQKKR 1009

Query: 62   TLEEASASMATALEKAGIDL 121
            TLEEASASMA A+E AGI L
Sbjct: 1010 TLEEASASMAAAVEGAGIQL 1029

Query: 122  181
            
Sbjct: 1070 1029

Query: 182  241
            
Sbjct: 1130 1029

BLAST of MU61605 vs. TrEMBL
Match: A0A067JUM2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00191 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.8e-27
Identity = 62/80 (77.50%), Postives = 70/80 (87.50%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            I+V+R  KT Y G LDSLRRVKEIVKEVNAGLECG+G EDYDDWE GD++EAF+TV+KKR
Sbjct: 963  IKVVRNRKTVYVGVLDSLRRVKEIVKEVNAGLECGIGTEDYDDWEEGDIIEAFNTVEKKR 1022

Query: 62   TLEEASASMATALEKAGIDL 121
            TLEEASASMA A+E AGI L
Sbjct: 1023 TLEEASASMAAAIEAAGISL 1042

Query: 122  181
            
Sbjct: 1083 1042

Query: 182  241
            
Sbjct: 1143 1042

BLAST of MU61605 vs. TAIR10
Match: AT1G17220.1 (AT1G17220.1 Translation initiation factor 2, small GTP-binding protein)

HSP 1 Score: 120.9 bits (302), Expect = 8.2e-28
Identity = 56/78 (71.79%), Postives = 68/78 (87.18%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            IRV+RKGKT + G LDSL+RVKE VKEV+AGLECG+GM+DYDDW  GD++EAF+ VQK+R
Sbjct: 949  IRVVRKGKTVHVGVLDSLKRVKENVKEVSAGLECGIGMDDYDDWIEGDIIEAFNAVQKRR 1008

Query: 62   TLEEASASMATALEKAGI 121
            TLEEASASM+ A+E+AG+
Sbjct: 1009 TLEEASASMSAAIEEAGV 1026

Query: 122  181
            
Sbjct: 1069 1026

Query: 182  236
            
Sbjct: 1129 1026

BLAST of MU61605 vs. TAIR10
Match: AT4G11160.1 (AT4G11160.1 Translation initiation factor 2, small GTP-binding protein)

HSP 1 Score: 52.0 bits (123), Expect = 4.7e-07
Identity = 23/59 (38.98%), Postives = 37/59 (62.71%), Query Frame = 2

Query: 2   IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKK 61
           +R+LR G+  + G   SL+R K+ V++V  G ECG+   D++D+ VGDV++  + V +K
Sbjct: 670 MRLLRSGEVVFEGSCASLKREKQDVEQVGKGNECGLVFGDWNDFRVGDVIQCMEPVIRK 728

Query: 62  121
           
Sbjct: 730 728

Query: 122 179
           
Sbjct: 790 728

BLAST of MU61605 vs. NCBI nr
Match: gi|659087091|ref|XP_008444270.1| (PREDICTED: translation initiation factor IF-2, chloroplastic [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR
Sbjct: 945  IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 1004

Query: 62   TLEEASASMATALEKAGIDL 121
            TLEEASASMATALEKAGIDL
Sbjct: 1005 TLEEASASMATALEKAGIDL 1024

Query: 122  181
            
Sbjct: 1065 1024

Query: 182  241
            
Sbjct: 1125 1024

BLAST of MU61605 vs. NCBI nr
Match: gi|449466939|ref|XP_004151183.1| (PREDICTED: translation initiation factor IF-2, chloroplastic [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 9.5e-34
Identity = 76/80 (95.00%), Postives = 78/80 (97.50%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            I+VLRKGK AYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGD +EAFDTVQKKR
Sbjct: 944  IQVLRKGKIAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDAIEAFDTVQKKR 1003

Query: 62   TLEEASASMATALEKAGIDL 121
            TLEEASASMATALEKAGIDL
Sbjct: 1004 TLEEASASMATALEKAGIDL 1023

Query: 122  181
            
Sbjct: 1064 1023

Query: 182  241
            
Sbjct: 1124 1023

BLAST of MU61605 vs. NCBI nr
Match: gi|629102218|gb|KCW67687.1| (hypothetical protein EUGRSUZ_F01432 [Eucalyptus grandis])

HSP 1 Score: 129.8 bits (325), Expect = 5.0e-27
Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = 2

Query: 2   IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
           IRV+RKGKTAY G LDSLRRVKEIVKEV  GLECG+GMEDYDDWE GD++EAF+TV+K+R
Sbjct: 910 IRVVRKGKTAYVGILDSLRRVKEIVKEVGTGLECGIGMEDYDDWEEGDIVEAFNTVEKRR 969

Query: 62  TLEEASASMATALEKAGIDL 121
           TLEEASASM  ALE  GI L
Sbjct: 970 TLEEASASMTAALEDVGIKL 989

Query: 122 181
           
Sbjct: 1030 989

Query: 182 241
           
Sbjct: 1090 989

BLAST of MU61605 vs. NCBI nr
Match: gi|702366378|ref|XP_010060818.1| (PREDICTED: LOW QUALITY PROTEIN: translation initiation factor IF-2, chloroplastic-like [Eucalyptus grandis])

HSP 1 Score: 129.8 bits (325), Expect = 5.0e-27
Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            IRV+RKGKTAY G LDSLRRVKEIVKEV  GLECG+GMEDYDDWE GD++EAF+TV+K+R
Sbjct: 957  IRVVRKGKTAYVGILDSLRRVKEIVKEVGTGLECGIGMEDYDDWEEGDIVEAFNTVEKRR 1016

Query: 62   TLEEASASMATALEKAGIDL 121
            TLEEASASM  ALE  GI L
Sbjct: 1017 TLEEASASMTAALEDVGIKL 1036

Query: 122  181
            
Sbjct: 1077 1036

Query: 182  241
            
Sbjct: 1137 1036

BLAST of MU61605 vs. NCBI nr
Match: gi|702366345|ref|XP_010060813.1| (PREDICTED: translation initiation factor IF-2, chloroplastic-like isoform X1 [Eucalyptus grandis])

HSP 1 Score: 129.8 bits (325), Expect = 5.0e-27
Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = 2

Query: 2    IRVLRKGKTAYTGQLDSLRRVKEIVKEVNAGLECGVGMEDYDDWEVGDVLEAFDTVQKKR 61
            IRV+RKGKTAY G LDSLRRVKEIVKEV  GLECG+GMEDYDDWE GD++EAF+TV+K+R
Sbjct: 945  IRVVRKGKTAYVGILDSLRRVKEIVKEVGVGLECGIGMEDYDDWEEGDIVEAFNTVEKRR 1004

Query: 62   TLEEASASMATALEKAGIDL 121
            TLEEASASM  ALE  GI L
Sbjct: 1005 TLEEASASMTAALEDVGIKL 1024

Query: 122  181
            
Sbjct: 1065 1024

Query: 182  241
            
Sbjct: 1125 1024

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
IF2C_ARATH1.5e-2671.79Translation initiation factor IF-2, chloroplastic OS=Arabidopsis thaliana GN=At1... [more]
IF2C_PHAVU4.0e-1661.90Translation initiation factor IF-2, chloroplastic OS=Phaseolus vulgaris GN=IF2CP... [more]
IF2_NOSP74.9e-1456.45Translation initiation factor IF-2 OS=Nostoc punctiforme (strain ATCC 29133 / PC... [more]
IF2_CYAP76.4e-1454.84Translation initiation factor IF-2 OS=Cyanothece sp. (strain PCC 7424) GN=infB P... [more]
IF2_CHLL78.3e-1459.68Translation initiation factor IF-2 OS=Chlorobium luteolum (strain DSM 273 / 2530... [more]
Match NameE-valueIdentityDescription
A0A0A0L611_CUCSA5.0e-3495.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G675260 PE=3 SV=1[more]
A0A059BN76_EUCGR2.7e-2778.75Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01432 PE=4 SV=1[more]
A0A059BN83_EUCGR2.7e-2778.75Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01437 PE=3 SV=1[more]
M5X751_PRUPE6.0e-2776.25Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000701mg PE=3 SV=1[more]
A0A067JUM2_JATCU7.8e-2777.50Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00191 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G17220.18.2e-2871.79 Translation initiation factor 2, small GTP-binding protein[more]
AT4G11160.14.7e-0738.98 Translation initiation factor 2, small GTP-binding protein[more]
Match NameE-valueIdentityDescription
gi|659087091|ref|XP_008444270.1|1.3e-35100.00PREDICTED: translation initiation factor IF-2, chloroplastic [Cucumis melo][more]
gi|449466939|ref|XP_004151183.1|9.5e-3495.00PREDICTED: translation initiation factor IF-2, chloroplastic [Cucumis sativus][more]
gi|629102218|gb|KCW67687.1|5.0e-2778.75hypothetical protein EUGRSUZ_F01432 [Eucalyptus grandis][more]
gi|702366378|ref|XP_010060818.1|5.0e-2778.75PREDICTED: LOW QUALITY PROTEIN: translation initiation factor IF-2, chloroplasti... [more]
gi|702366345|ref|XP_010060813.1|5.0e-2778.75PREDICTED: translation initiation factor IF-2, chloroplastic-like isoform X1 [Eu... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C010552MELO3C010552gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
HS17D09HS17D09EST