MU61596 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU61596
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Non-specific serine/threonine protein kinase
Location	chr8 : 4584628 .. 4585146 (-)
Sequence length	520

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AAGTGATGCACGTCTTCTACGTCGCAATGCTATGTGTCGAGGAACAGGCAGTGGAGCGCCCAACAATGCGGGAAGTGATCCAAATCCTATCGGAGATTCCACAGCCACCAAGTTCCAAACAAGGAGGAGATTCAACACTCCCCAACTCGTCACCACCCCCACCACCAACAGCTGCAGATTTAGACCTTCCAACAACAGGAACCAAGAACAAAAAAGAGCATCAGCAACAGCAACCGCCACCAGATCTTCTTAGCATTTGAACAACTTAGTTGGGGTTGGTAGTGTCTCTACTGTCTTTCGCAAGGTCCAAACAATTAAAGCTTTGGCTCTTGGACCTGCGATGTCGTTTATTTTTCTTTTGGGGGGATTAGGTTTGGTTTTTTTTAATGTTATGGTACTAATGTTCAAAAGTTCCTTTTTTCTTTTTTTTTCTTTTCATGTACAGTTGACCAGTTGGGTTTATTGGGGGAGGGTATTTTCCTATGAGATTGTTCTTTTCTAATGTTGAAGCATTTCCACT

Library


Library category	ESTs
melon HS library	1

Homology

[Close]

BLAST of MU61596 vs. Swiss-Prot
Match: BAME2_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-11
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 3


Query: 3   VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQ 62
           V HVFYVA+LCVEEQAVERPTMREV+QIL+EIP+ P SKQ
Sbjct: 933 VTHVFYVALLCVEEQAVERPTMREVVQILTEIPKIPLSKQ 972

Query: 63   122
           
Sbjct: 993  972

[Close]

BLAST of MU61596 vs. Swiss-Prot
Match: BAME1_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.6e-11
Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 3


Query: 3   VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSK 62
           V HVFYVAMLCVEEQAVERPTMREV+QIL+EIP+ P SK
Sbjct: 937 VTHVFYVAMLCVEEQAVERPTMREVVQILTEIPKLPPSK 975

Query: 63   120
           
Sbjct: 997  975

[Close]

BLAST of MU61596 vs. Swiss-Prot
Match: BAME3_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana GN=BAM3 PE=2 SV=3)

HSP 1 Score: 52.8 bits (125), Expect = 4.5e-06
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 3


Query: 6   MHVFYVAMLCVEEQAVERPTMREVIQILSEIPQP 65
           M +F+VAMLCV+E +VERPTMREV+Q++S+  QP
Sbjct: 956 MELFFVAMLCVQEHSVERPTMREVVQMISQAKQP 989

Query: 66   108
           
Sbjct: 1016  989

[Close]

BLAST of MU61596 vs. TrEMBL
Match: A0A0A0KJT6_CUCSA (Non-specific serine/threonine protein kinase OS=Cucumis sativus GN=Csa_6G497080 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.7e-25
Identity = 63/85 (74.12%), Postives = 63/85 (74.12%), Query Frame = 3


Query: 3    VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGXXXXXXXXXXXXXXXXXX 62
            VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGG                  
Sbjct: 935  VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGDSTLPNSSPPPPPTAADL 994

Query: 63   XXXXTGTKNKKEHQQQQPPPDLLSI 122
                TGTKNKKEHQQQQPPPDLLSI
Sbjct: 995  DLPTTGTKNKKEHQQQQPPPDLLSI 1019

Query: 123   182
            
Sbjct: 1055  1019

Query: 183   242
            
Sbjct: 1115  1019

Query: 243   258
            
Sbjct: 1175  1019

[Close]

BLAST of MU61596 vs. TrEMBL
Match: M5WS11_PRUPE (Non-specific serine/threonine protein kinase OS=Prunus persica GN=PRUPE_ppa000739mg PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.3e-16
Identity = 52/89 (58.43%), Postives = 57/89 (64.04%), Query Frame = 3


Query: 3    VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGXXXXXXXXXXXXXXXXXX 62
            VMHVFYVAMLCVEEQAVERPTMREV+QIL+E+P+ P SKQGG                  
Sbjct: 931  VMHVFYVAMLCVEEQAVERPTMREVVQILTELPKAPGSKQGG--GDSAITESFPPSGTSA 990

Query: 63   XXXXTGTKNKKEHQQ----QQPPPDLLSI 122
                T T N K+HQQ    Q PPPDLLSI
Sbjct: 991  SESPTTTSNTKDHQQQAPPQSPPPDLLSI 1017

Query: 123   182
            
Sbjct: 1051  1017

Query: 183   242
            
Sbjct: 1111  1017

Query: 243   258
            
Sbjct: 1171  1017

[Close]

BLAST of MU61596 vs. TrEMBL
Match: F6HWW0_VITVI (Non-specific serine/threonine protein kinase OS=Vitis vinifera GN=VIT_00s1353g00010 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.3e-16
Identity = 52/88 (59.09%), Postives = 57/88 (64.77%), Query Frame = 3


Query: 3    VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGXXXXXXXXXXXXXXXXXX 62
            VMHVFYVAMLCVEEQAVERPTMREV+QIL+E+P+PPSSKQG                   
Sbjct: 935  VMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPSSKQG-----DSIVTESSPPSCTL 994

Query: 63   XXXXTGTKNKKEHQQ---QQPPPDLLSI 122
                T  K  K+HQQ   Q PPPDLLSI
Sbjct: 995  ESPTTTIKETKDHQQQPPQSPPPDLLSI 1017

Query: 123   182
            
Sbjct: 1055  1017

Query: 183   242
            
Sbjct: 1115  1017

Query: 243   258
            
Sbjct: 1175  1017

[Close]

BLAST of MU61596 vs. TrEMBL
Match: A0A067KAV0_JATCU (Non-specific serine/threonine protein kinase OS=Jatropha curcas GN=JCGZ_12604 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.6e-16
Identity = 47/85 (55.29%), Postives = 57/85 (67.06%), Query Frame = 3


Query: 3    VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGXXXXXXXXXXXXXXXXXX 62
            VMHVFYVAMLCVEEQA+ERPTMREV+QIL+E+P+PP+SKQG                   
Sbjct: 932  VMHVFYVAMLCVEEQAIERPTMREVVQILTELPKPPNSKQG---DLTVTESSPQSAATLD 991

Query: 63   XXXXTGTKNKKEHQQQQPPPDLLSI 122
                  T+++K+HQ  Q PPDLLSI
Sbjct: 992  SPNAATTRDQKDHQSPQSPPDLLSI 1013

Query: 123   182
            
Sbjct: 1052  1013

Query: 183   242
            
Sbjct: 1112  1013

Query: 243   258
            
Sbjct: 1172  1013

[Close]

BLAST of MU61596 vs. TrEMBL
Match: V4RX11_9ROSI (Non-specific serine/threonine protein kinase OS=Citrus clementina GN=CICLE_v10024796mg PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.8e-15
Identity = 49/89 (55.06%), Postives = 58/89 (65.17%), Query Frame = 3


Query: 3    VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGXXXXXXXXXXXXXXXXXX 62
            VMHVFYVAMLCVEEQAVERPTMREV+QIL+E+P+PP+SKQG                   
Sbjct: 931  VMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPTSKQG-------EESLPPSGTTSL 990

Query: 63   XXXXTGTKNKKEHQQ----QQPPPDLLSI 122
                   K++K+HQ+    Q PPPDLLSI
Sbjct: 991  DSPNASNKDQKDHQRPAPPQSPPPDLLSI 1012

Query: 123   182
            
Sbjct: 1051  1012

Query: 183   242
            
Sbjct: 1111  1012

Query: 243   258
            
Sbjct: 1171  1012

[Close]

BLAST of MU61596 vs. TAIR10
Match: AT3G49670.1 (AT3G49670.1 Leucine-rich receptor-like protein kinase family protein)

HSP 1 Score: 69.7 bits (169), Expect = 2.0e-12
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 3


Query: 3   VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQ 62
           V HVFYVA+LCVEEQAVERPTMREV+QIL+EIP+ P SKQ
Sbjct: 933 VTHVFYVALLCVEEQAVERPTMREVVQILTEIPKIPLSKQ 972

Query: 63   122
           
Sbjct: 993  972

[Close]

BLAST of MU61596 vs. TAIR10
Match: AT5G65700.1 (AT5G65700.1 Leucine-rich receptor-like protein kinase family protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.6e-12
Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 3


Query: 3   VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSK 62
           V HVFYVAMLCVEEQAVERPTMREV+QIL+EIP+ P SK
Sbjct: 937 VTHVFYVAMLCVEEQAVERPTMREVVQILTEIPKLPPSK 975

Query: 63   120
           
Sbjct: 997  975

[Close]

BLAST of MU61596 vs. TAIR10
Match: AT4G20270.1 (AT4G20270.1 Leucine-rich receptor-like protein kinase family protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.5e-07
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 3


Query: 6   MHVFYVAMLCVEEQAVERPTMREVIQILSEIPQP 65
           M +F+VAMLCV+E +VERPTMREV+Q++S+  QP
Sbjct: 956 MELFFVAMLCVQEHSVERPTMREVVQMISQAKQP 989

Query: 66   108
           
Sbjct: 1016  989

[Close]

BLAST of MU61596 vs. TAIR10
Match: AT1G75820.1 (AT1G75820.1 Leucine-rich receptor-like protein kinase family protein)

HSP 1 Score: 48.1 bits (113), Expect = 6.2e-06
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 3


Query: 3   VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQ 62
           V+HVF +AM+CVEE+A  RPTMREV+ +L+  P+
Sbjct: 939 VIHVFKIAMMCVEEEAAARPTMREVVHMLTNPPK 972

Query: 63   105
           
Sbjct: 999  972

[Close]

BLAST of MU61596 vs. NCBI nr
Match: gi|449451345|ref|XP_004143422.1| (PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 8.1e-24
Identity = 63/85 (74.12%), Postives = 63/85 (74.12%), Query Frame = 3


Query: 3    VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGXXXXXXXXXXXXXXXXXX 62
            VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGG                  
Sbjct: 935  VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGDSTLPNSSPPPPPTAADL 994

Query: 63   XXXXTGTKNKKEHQQQQPPPDLLSI 122
                TGTKNKKEHQQQQPPPDLLSI
Sbjct: 995  DLPTTGTKNKKEHQQQQPPPDLLSI 1019

Query: 123   182
            
Sbjct: 1055  1019

Query: 183   242
            
Sbjct: 1115  1019

Query: 243   258
            
Sbjct: 1175  1019

[Close]

BLAST of MU61596 vs. NCBI nr
Match: gi|659081032|ref|XP_008441113.1| (PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1, partial [Cucumis melo])

HSP 1 Score: 119.0 bits (297), Expect = 8.1e-24
Identity = 63/85 (74.12%), Postives = 63/85 (74.12%), Query Frame = 3


Query: 3   VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGXXXXXXXXXXXXXXXXXX 62
           VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGG                  
Sbjct: 893 VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGDSTLPNSSPPPPPTAADL 952

Query: 63  XXXXTGTKNKKEHQQQQPPPDLLSI 122
               TGTKNKKEHQQQQPPPDLLSI
Sbjct: 953 DLPTTGTKNKKEHQQQQPPPDLLSI 977

Query: 123  182
           
Sbjct: 1013  977

Query: 183  242
           
Sbjct: 1073  977

Query: 243  258
           
Sbjct: 1133  977

[Close]

BLAST of MU61596 vs. NCBI nr
Match: gi|645219770|ref|XP_008237309.1| (PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Prunus mume])

HSP 1 Score: 90.1 bits (222), Expect = 4.0e-15
Identity = 52/89 (58.43%), Postives = 57/89 (64.04%), Query Frame = 3


Query: 3   VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGXXXXXXXXXXXXXXXXXX 62
           VMHVFYVAMLCVEEQAVERPTMREV+QIL+E+P+ P SKQGG                  
Sbjct: 882 VMHVFYVAMLCVEEQAVERPTMREVVQILTELPKAPGSKQGG--GDSAITESFPPSGTSA 941

Query: 63  XXXXTGTKNKKEHQQ----QQPPPDLLSI 122
               T T N K+HQQ    Q PPPDLLSI
Sbjct: 942 SESPTTTSNTKDHQQQAPPQSPPPDLLSI 968

Query: 123  182
           
Sbjct: 1002  968

Query: 183  242
           
Sbjct: 1062  968

Query: 243  258
           
Sbjct: 1122  968

[Close]

BLAST of MU61596 vs. NCBI nr
Match: gi|595842447|ref|XP_007208421.1| (hypothetical protein PRUPE_ppa000739mg [Prunus persica])

HSP 1 Score: 90.1 bits (222), Expect = 4.0e-15
Identity = 52/89 (58.43%), Postives = 57/89 (64.04%), Query Frame = 3


Query: 3    VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGXXXXXXXXXXXXXXXXXX 62
            VMHVFYVAMLCVEEQAVERPTMREV+QIL+E+P+ P SKQGG                  
Sbjct: 931  VMHVFYVAMLCVEEQAVERPTMREVVQILTELPKAPGSKQGG--GDSAITESFPPSGTSA 990

Query: 63   XXXXTGTKNKKEHQQ----QQPPPDLLSI 122
                T T N K+HQQ    Q PPPDLLSI
Sbjct: 991  SESPTTTSNTKDHQQQAPPQSPPPDLLSI 1017

Query: 123   182
            
Sbjct: 1051  1017

Query: 183   242
            
Sbjct: 1111  1017

Query: 243   258
            
Sbjct: 1171  1017

[Close]

BLAST of MU61596 vs. NCBI nr
Match: gi|296088218|emb|CBI35733.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 89.7 bits (221), Expect = 5.2e-15
Identity = 52/88 (59.09%), Postives = 57/88 (64.77%), Query Frame = 3


Query: 3   VMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGXXXXXXXXXXXXXXXXXX 62
           VMHVFYVAMLCVEEQAVERPTMREV+QIL+E+P+PPSSKQG                   
Sbjct: 866 VMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPSSKQG-----DSIVTESSPPSCTL 925

Query: 63  XXXXTGTKNKKEHQQ---QQPPPDLLSI 122
               T  K  K+HQQ   Q PPPDLLSI
Sbjct: 926 ESPTTTIKETKDHQQQPPQSPPPDLLSI 948

Query: 123  182
           
Sbjct: 986  948

Query: 183  242
           
Sbjct: 1046  948

Query: 243  258
           
Sbjct: 1106  948

The following BLAST results are available for this feature:

BLAST of MU61596 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BAME2_ARATH	3.5e-11	82.50	Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabid...	[more]
BAME1_ARATH	4.6e-11	84.62	Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabid...	[more]
BAME3_ARATH	4.5e-06	64.71	Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabid...	[more]

BLAST of MU61596 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJT6_CUCSA	6.7e-25	74.12	Non-specific serine/threonine protein kinase OS=Cucumis sativus GN=Csa_6G497080 ...	[more]
M5WS11_PRUPE	3.3e-16	58.43	Non-specific serine/threonine protein kinase OS=Prunus persica GN=PRUPE_ppa00073...	[more]
F6HWW0_VITVI	4.3e-16	59.09	Non-specific serine/threonine protein kinase OS=Vitis vinifera GN=VIT_00s1353g00...	[more]
A0A067KAV0_JATCU	9.6e-16	55.29	Non-specific serine/threonine protein kinase OS=Jatropha curcas GN=JCGZ_12604 PE...	[more]
V4RX11_9ROSI	2.8e-15	55.06	Non-specific serine/threonine protein kinase OS=Citrus clementina GN=CICLE_v1002...	[more]

BLAST of MU61596 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G49670.1	2.0e-12	82.50	Leucine-rich receptor-like protein kinase family protein	[more]
AT5G65700.1	2.6e-12	84.62	Leucine-rich receptor-like protein kinase family protein	[more]
AT4G20270.1	2.5e-07	64.71	Leucine-rich receptor-like protein kinase family protein	[more]
AT1G75820.1	6.2e-06	58.82	Leucine-rich receptor-like protein kinase family protein	[more]

BLAST of MU61596 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451345\|ref\|XP_004143422.1\|	8.1e-24	74.12	PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM...	[more]
gi\|659081032\|ref\|XP_008441113.1\|	8.1e-24	74.12	PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM...	[more]
gi\|645219770\|ref\|XP_008237309.1\|	4.0e-15	58.43	PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM...	[more]
gi\|595842447\|ref\|XP_007208421.1\|	4.0e-15	58.43	hypothetical protein PRUPE_ppa000739mg [Prunus persica]	[more]
gi\|296088218\|emb\|CBI35733.3\|	5.2e-15	59.09	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C007676	MELO3C007676	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
HS17B05	HS17B05	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 2..30 score: 8.9
None	No IPR available	PANTHER	PTHR27000:SF174	LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM1	coord: 2..30 score: 8.9