MU61074 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU61074
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNo hit
Locationchr5 : 5680631 .. 5688384 (-)
Sequence length533
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

AACAAGCAAGTGAAACAAATCCAAACAAGAAAAAAAAAGCCACAAAATGTCTCATAAACATTTGGTTATTCTTCTTCTTGGAGTGATTCTTCTCAGCAGTACCCAAGTGATTGCCCGAACTTATTACTTGCCGGAGAACCACCACAGACTCACTCCCTCCGCCACCGTCCCATCGGCGGTCGGGAAATCTTTGCCAAAACTCCCACCTTTTGAAGAAAAATTTTCCCAAAAAACCGAGATTGCCAAAAATCAAGTCGCCACCGCCACCGCGGCAGCTACCATACTGAAACTGCCTTCTTCCAACTGATTGCCAAAAAGTTGCAGTGATTTGAAGGTGTTTAATATAAATCAGCACCCCCATAACTGCGGCGGTGCTCTCTCTCAACTCTCTAAGAGTGTCATCTTGGCAAAGAGACAAAATATTTCCATACAATTTGCATCACCTGTCCAAGTCGACTACAGTACTTAACAGTTTTGATCCCATAACAGACCCCAATCATAATTCATAACAATATGTTTTTTAGTTAGCAGCG
Library
Library categoryESTs
melon VFLP2 library1
Homology
[Close]
BLAST of MU61074 vs. TrEMBL
Match: A0MCW3_CUCSA (Pathogen induced 4 protein OS=Cucumis sativus GN=pi4 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-09
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 2 

Query: 98  STQVIARTYYLPENHHRLTPSATVPSAVGKSLPKLPPFEEKFSQK 157
           STQVIAR YYL ENHHRLTPSATVPSAVG+SL KLPP+ +K   K
Sbjct: 17  STQVIARPYYLSENHHRLTPSATVPSAVGESLQKLPPWLKKIFPK 61

Query: 158  217
           
Sbjct: 77   61

Query: 218  233
           
Sbjct: 137  61

[Close]
BLAST of MU61074 vs. NCBI nr
Match: gi|94450551|gb|ABF19725.1| (pathogen induced 4 protein [Cucumis sativus])

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-09
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 2 

Query: 98  STQVIARTYYLPENHHRLTPSATVPSAVGKSLPKLPPFEEKFSQK 157
           STQVIAR YYL ENHHRLTPSATVPSAVG+SL KLPP+ +K   K
Sbjct: 17  STQVIARPYYLSENHHRLTPSATVPSAVGESLQKLPPWLKKIFPK 61

Query: 158  217
           
Sbjct: 77   61

Query: 218  233
           
Sbjct: 137  61

The following BLAST results are available for this feature:
BLAST of MU61074 vs. TrEMBL
Match NameE-valueIdentityDescription
A0MCW3_CUCSA1.1e-0977.78Pathogen induced 4 protein OS=Cucumis sativus GN=pi4 PE=2 SV=1[more]
BLAST of MU61074 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|94450551|gb|ABF19725.1|2.0e-0977.78pathogen induced 4 protein [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C022991MELO3C022991gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
GA42YM16FM1GA42YM16FM1EST