MU60654 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU60654
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProteasome subunit beta type
Locationchr3 : 25807519 .. 25808792 (+)
Sequence length296
The following sequences are available for this feature:

transcribed_cluster sequence

TGTCGATCTGGCTCGGCTGCTGATTCTCAAATTGTTTCTGATTATGTGCGCCACTTCCTTCATCAACACACGATACAGCTTGGCCAGCCTGCGACTGTTAAAGTGGCGGCAAACCTTGTTAGGCTATTAGCATATAACAACAAGGTAGGAGTTCACATTAGTTTGTCCGAAATTAATGCATGCTAAATATGTATGTAAAGCAATTTTCAATAAGAAACAGTAACAATTATTTGAAACAGTGCCGATGCCCCAAGGCCCCCAACCCAGCCAAGGAGATAGATAAAAACTCTCCTGTT
BLAST of MU60654 vs. Swiss-Prot
Match: PSB6_TOBAC (Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 9.9e-19
Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK 60
           CRSGSAADSQIVSDYVR+FLHQHTIQLGQPATVKVAANL RLL+YNNK
Sbjct: 57  CRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNK 104

Query: 61  120
           
Sbjct: 117 104

Query: 121 145
           
Sbjct: 177 104

BLAST of MU60654 vs. Swiss-Prot
Match: PSB6_ARATH (Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 6.4e-18
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK 60
           CRSGSAADSQ+VSDYVR+FLHQHTIQ GQPATVKV+ANL+R+LAYNNK
Sbjct: 56  CRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNK 103

Query: 61  120
           
Sbjct: 116 103

Query: 121 145
           
Sbjct: 176 103

BLAST of MU60654 vs. Swiss-Prot
Match: PSB6_DICDI (Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08
Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK 60
           CRSGSAAD+Q +SDYVR++L  HT +L     VK AA+L +LL Y+NK
Sbjct: 58  CRSGSAADTQAISDYVRYYLEMHTSELCDEPDVKTAASLFQLLCYSNK 105

Query: 61  120
           
Sbjct: 118 105

Query: 121 145
           
Sbjct: 178 105

BLAST of MU60654 vs. TrEMBL
Match: A0A166FNY4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_000673 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-17
Identity = 47/49 (95.92%), Postives = 49/49 (100.00%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKV 60
           CRSGSAADSQIVSDYVR+FLHQHTIQLGQPATVKVAANLVRLL+YNNKV
Sbjct: 73  CRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKV 121

Query: 61  120
           
Sbjct: 133 121

Query: 121 148
           
Sbjct: 193 121

BLAST of MU60654 vs. TrEMBL
Match: B7FGZ8_MEDTR (Proteasome subunit beta type OS=Medicago truncatula GN=MTR_3g109210 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-17
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKVGVHISL 60
           CRSGSAADSQ+VSDYVR+FLHQHTIQLGQPATVKVAANLVRLLAYNNK  +   L
Sbjct: 57  CRSGSAADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLAYNNKNNLQTGL 111

Query: 61  120
           
Sbjct: 117 111

Query: 121 166
           
Sbjct: 177 111

BLAST of MU60654 vs. TrEMBL
Match: A0A0J8FPQ9_BETVU (Proteasome subunit beta type OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g035270 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-17
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK 60
           CRSGSAADSQIVSDYVR+FLHQHTIQLGQPATVKVAANLVRLLAYNNK
Sbjct: 58  CRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLAYNNK 105

Query: 61  120
           
Sbjct: 118 105

Query: 121 145
           
Sbjct: 178 105

BLAST of MU60654 vs. TrEMBL
Match: A0A118JT49_CYNCS (Proteasome subunit beta type OS=Cynara cardunculus var. scolymus GN=Ccrd_008128 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-17
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK 60
           CRSGSAADSQ+VSDYVRHFLHQHTIQLGQPATVKVAANL+RLL+YNNK
Sbjct: 59  CRSGSAADSQLVSDYVRHFLHQHTIQLGQPATVKVAANLIRLLSYNNK 106

Query: 61  120
           
Sbjct: 119 106

Query: 121 145
           
Sbjct: 179 106

BLAST of MU60654 vs. TrEMBL
Match: A0A0B2QDZ8_GLYSO (Proteasome subunit beta type OS=Glycine soja GN=glysoja_025118 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-17
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK 60
           CRSGSAADSQIVSDYVR+FLHQHTIQLGQPATVKVAANLVRLLAYNNK
Sbjct: 58  CRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLAYNNK 105

Query: 61  120
           
Sbjct: 118 105

Query: 121 145
           
Sbjct: 178 105

BLAST of MU60654 vs. TAIR10
Match: AT4G31300.2 (AT4G31300.2 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 3.6e-19
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK 60
           CRSGSAADSQ+VSDYVR+FLHQHTIQ GQPATVKV+ANL+R+LAYNNK
Sbjct: 56  CRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNK 103

Query: 61  120
           
Sbjct: 116 103

Query: 121 145
           
Sbjct: 176 103

BLAST of MU60654 vs. NCBI nr
Match: gi|659088591|ref|XP_008445064.1| (PREDICTED: proteasome subunit beta type-6 [Cucumis melo])

HSP 1 Score: 99.8 bits (247), Expect = 2.9e-18
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK 60
           CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK
Sbjct: 58  CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK 105

Query: 61  120
           
Sbjct: 118 105

Query: 121 145
           
Sbjct: 178 105

BLAST of MU60654 vs. NCBI nr
Match: gi|694366972|ref|XP_009362017.1| (PREDICTED: proteasome subunit beta type-6-like [Pyrus x bretschneideri])

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-17
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK 60
           CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANL+RL AYNNK
Sbjct: 60  CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLIRLFAYNNK 107

Query: 61  120
           
Sbjct: 120 107

Query: 121 145
           
Sbjct: 180 107

BLAST of MU60654 vs. NCBI nr
Match: gi|976901908|gb|KVH89877.1| (hypothetical protein Ccrd_008128 [Cynara cardunculus var. scolymus])

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-17
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNK 60
           CRSGSAADSQ+VSDYVRHFLHQHTIQLGQPATVKVAANL+RLL+YNNK
Sbjct: 59  CRSGSAADSQLVSDYVRHFLHQHTIQLGQPATVKVAANLIRLLSYNNK 106

Query: 61  120
           
Sbjct: 119 106

Query: 121 145
           
Sbjct: 179 106

BLAST of MU60654 vs. NCBI nr
Match: gi|357466571|ref|XP_003603570.1| (proteasome subunit beta protein [Medicago truncatula])

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-17
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKVGVHISL 60
           CRSGSAADSQ+VSDYVR+FLHQHTIQLGQPATVKVAANLVRLLAYNNK  +   L
Sbjct: 57  CRSGSAADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLAYNNKNNLQTGL 111

Query: 61  120
           
Sbjct: 117 111

Query: 121 166
           
Sbjct: 177 111

BLAST of MU60654 vs. NCBI nr
Match: gi|1021050226|gb|KZN08004.1| (hypothetical protein DCAR_000673 [Daucus carota subsp. sativus])

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-17
Identity = 47/49 (95.92%), Postives = 49/49 (100.00%), Query Frame = 1

Query: 1   CRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKV 60
           CRSGSAADSQIVSDYVR+FLHQHTIQLGQPATVKVAANLVRLL+YNNKV
Sbjct: 73  CRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKV 121

Query: 61  120
           
Sbjct: 133 121

Query: 121 148
           
Sbjct: 193 121

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PSB6_TOBAC9.9e-1993.75Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1[more]
PSB6_ARATH6.4e-1887.50Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1 SV=2[more]
PSB6_DICDI1.2e-0858.33Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A166FNY4_DAUCA1.3e-1795.92Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_000673 PE=4 SV=1[more]
B7FGZ8_MEDTR1.7e-1785.45Proteasome subunit beta type OS=Medicago truncatula GN=MTR_3g109210 PE=2 SV=1[more]
A0A0J8FPQ9_BETVU1.7e-1797.92Proteasome subunit beta type OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g035270 P... [more]
A0A118JT49_CYNCS1.7e-1793.75Proteasome subunit beta type OS=Cynara cardunculus var. scolymus GN=Ccrd_008128 ... [more]
A0A0B2QDZ8_GLYSO1.7e-1797.92Proteasome subunit beta type OS=Glycine soja GN=glysoja_025118 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G31300.23.6e-1987.50 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily ... [more]
Match NameE-valueIdentityDescription
gi|659088591|ref|XP_008445064.1|2.9e-18100.00PREDICTED: proteasome subunit beta type-6 [Cucumis melo][more]
gi|694366972|ref|XP_009362017.1|1.1e-1795.83PREDICTED: proteasome subunit beta type-6-like [Pyrus x bretschneideri][more]
gi|976901908|gb|KVH89877.1|1.4e-1793.75hypothetical protein Ccrd_008128 [Cynara cardunculus var. scolymus][more]
gi|357466571|ref|XP_003603570.1|1.4e-1785.45proteasome subunit beta protein [Medicago truncatula][more]
gi|1021050226|gb|KZN08004.1|1.4e-1795.92hypothetical protein DCAR_000673 [Daucus carota subsp. sativus][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR001353Proteasome_sua/b
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
cellular_component GO:0005839 proteasome core complex
molecular_function GO:0004298 threonine-type endopeptidase activity

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C011172MELO3C011172gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FR15G13FR15G13EST


Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 1..47
score: 1.
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 1..48
score: 1.2
NoneNo IPR availablePANTHERPTHR11599:SF4PROTEASOME SUBUNIT BETA TYPEcoord: 1..48
score: 1.2