MU59377 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU59377
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Dynamin-like 120 kDa protein, putative isoform 1
Location	chr4 : 352437 .. 354759 (+)
Sequence length	351

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AAAACTTGCAGAGTCGAGAGACTGAAGGGTTGTTGAAGAATGGAAGCTACAAGTGTCTCAGGCAGTAAGGGTACGGTGATTTCTGAGAAAGGGCAATTTCGTGGAATCCGAATAGAGAATCCCTTTACTTTGAAGGTGGGTCAAATTTTTACAGGCTTTGGCGTCGGATGTGGCGTCGGTATCGGCGTTGGCCGCCCCATAAACATGGGTGCAATTCCTGTCATGAACGAATTAATGAGTGCCACAAGAGGTGCAACCGATGCGTTTTCTGGCATAACGAGGCACTTAAATAACTCTCTCAGGAAATTAGGAGCTACGAACATCCAAGCTGGCATTGGGTGTGGAGTTGGT

Library


Library category	ESTs
melon CI library	1

Homology

[Close]

BLAST of MU59377 vs. TrEMBL
Match: A0A0A0LHI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G912960 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.3e-45
Identity = 97/117 (82.91%), Postives = 100/117 (85.47%), Query Frame = 1


Query: 1   KTCRVERLKGC*RMEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTXXXXXXXXX 60
           KTCRV+RLKGC RMEATSVS SKGTVIS+KG FRGIRIENPFTLKVGQIFT         
Sbjct: 40  KTCRVQRLKGCSRMEATSVSESKGTVISQKGHFRGIRIENPFTLKVGQIFTGFGVGCGVG 99

Query: 61  XXXXRPINMGAIPVMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 120
               RP+NMGAIP MNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG
Sbjct: 100 IGVGRPMNMGAIPGMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 156

Query: 121  180
           
Sbjct: 160  156

Query: 181  240
           
Sbjct: 220  156

Query: 241  300
           
Sbjct: 280  156

Query: 301  352
           
Sbjct: 340  156

[Close]

BLAST of MU59377 vs. TrEMBL
Match: M5WBC1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009287mg PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.3e-26
Identity = 64/107 (59.81%), Postives = 79/107 (73.83%), Query Frame = 1


Query: 40  MEATSVSGSKGT---VISEKGQFRGIRIENPFTLKVGQIFTXXXXXXXXXXXXXRPINMG 99
           MEA+S + S  +   V +E+    GIRIENPFTLKVGQ+FT             RPIN+G
Sbjct: 1   MEASSSNSSSKSGLVVANERRPSGGIRIENPFTLKVGQVFTGFGIGCGVGIGVGRPINLG 60

Query: 100 AIPVMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 159
           AIPV+N++M ATRGATDA SG++RH+NNSLRK+GA NI+AGIGCGVG
Sbjct: 61  AIPVLNQVMGATRGATDALSGVSRHVNNSLRKVGAKNIEAGIGCGVG 107

Query: 160  219
           
Sbjct: 121  107

Query: 220  279
           
Sbjct: 181  107

Query: 280  339
           
Sbjct: 241  107

Query: 340  352
           
Sbjct: 301  107

[Close]

BLAST of MU59377 vs. TrEMBL
Match: A0A061GB21_THECC (Dynamin-like 120 kDa protein, putative isoform 1 OS=Theobroma cacao GN=TCM_015882 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-25
Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 1


Query: 52  SVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTXXXXXXXXXXXXXRPINMGAIPVMNE 111
           S S  K  V +++  F GIR+ENPFTLKVGQ+FT             RPIN+GAIP++ +
Sbjct: 6   SNSNDKIEVTNQRKGFEGIRMENPFTLKVGQVFTGFGIGCGIGIGVGRPINLGAIPMLGQ 65

Query: 112 LMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 171
           +MSATRGATDAFSG++RH+N +LRKLGA NI+AGIGCGVG
Sbjct: 66  VMSATRGATDAFSGVSRHVNGALRKLGAKNIEAGIGCGVG 105

Query: 172  231
           
Sbjct: 126  105

Query: 232  291
           
Sbjct: 186  105

Query: 292  351
           
Sbjct: 246  105

[Close]

BLAST of MU59377 vs. TrEMBL
Match: A0A059CI40_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02124 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.0e-25
Identity = 59/103 (57.28%), Postives = 76/103 (73.79%), Query Frame = 1


Query: 43  EATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTXXXXXXXXXXXXXRPINMGAIPV 102
           E+ S SGS   + ++K  F+GIR++NPFT KVGQ+FT             RPIN+GAIPV
Sbjct: 9   ESISSSGSSVALSNQKKPFQGIRVQNPFTFKVGQVFTGFGIGCGLGIGVGRPINLGAIPV 68

Query: 103 MNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 162
           +N++MSAT GAT A SG+TRH+N+ LRKLGA N++AGIGCGVG
Sbjct: 69  VNQVMSATSGATYALSGVTRHVNDGLRKLGAKNVEAGIGCGVG 111

Query: 163  222
           
Sbjct: 129  111

Query: 223  282
           
Sbjct: 189  111

Query: 283  342
           
Sbjct: 249  111

Query: 343  352
           
Sbjct: 309  111

[Close]

BLAST of MU59377 vs. TrEMBL
Match: A0A059CHW9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02124 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.0e-25
Identity = 59/103 (57.28%), Postives = 76/103 (73.79%), Query Frame = 1


Query: 43  EATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTXXXXXXXXXXXXXRPINMGAIPV 102
           E+ S SGS   + ++K  F+GIR++NPFT KVGQ+FT             RPIN+GAIPV
Sbjct: 9   ESISSSGSSVALSNQKKPFQGIRVQNPFTFKVGQVFTGFGIGCGLGIGVGRPINLGAIPV 68

Query: 103 MNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 162
           +N++MSAT GAT A SG+TRH+N+ LRKLGA N++AGIGCGVG
Sbjct: 69  VNQVMSATSGATYALSGVTRHVNDGLRKLGAKNVEAGIGCGVG 111

Query: 163  222
           
Sbjct: 129  111

Query: 223  282
           
Sbjct: 189  111

Query: 283  342
           
Sbjct: 249  111

Query: 343  352
           
Sbjct: 309  111

[Close]

BLAST of MU59377 vs. TAIR10
Match: AT4G17540.1 (AT4G17540.1 unknown protein)

HSP 1 Score: 101.3 bits (251), Expect = 4.2e-22
Identity = 49/99 (49.49%), Postives = 64/99 (64.65%), Query Frame = 1


Query: 64  SKGTVISEKG---QFRGIRIENPFTLKVGQIFTXXXXXXXXXXXXXRPINMGAIPVMNEL 123
           S G V+ ++G     RGI+IENPF  K  Q+FT              P+N+G+IP++ E+
Sbjct: 11  SNGVVMKKEGLGFSKRGIKIENPFAFKALQVFTGFGVGCGVGIGSGAPLNLGSIPMVGEI 70

Query: 124 MSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 183
           M++ RGAT+ FSG T H+N +LRKLGA NIQAG+GCGVG
Sbjct: 71  MNSARGATNVFSGATHHVNGALRKLGARNIQAGVGCGVG 109

Query: 184  243
           
Sbjct: 131  109

Query: 244  303
           
Sbjct: 191  109

Query: 304  352
           
Sbjct: 251  109

[Close]

BLAST of MU59377 vs. NCBI nr
Match: gi|700205331|gb|KGN60464.1| (hypothetical protein Csa_3G912960 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-45
Identity = 97/117 (82.91%), Postives = 100/117 (85.47%), Query Frame = 1


Query: 1   KTCRVERLKGC*RMEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTXXXXXXXXX 60
           KTCRV+RLKGC RMEATSVS SKGTVIS+KG FRGIRIENPFTLKVGQIFT         
Sbjct: 40  KTCRVQRLKGCSRMEATSVSESKGTVISQKGHFRGIRIENPFTLKVGQIFTGFGVGCGVG 99

Query: 61  XXXXRPINMGAIPVMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 120
               RP+NMGAIP MNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG
Sbjct: 100 IGVGRPMNMGAIPGMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 156

Query: 121  180
           
Sbjct: 160  156

Query: 181  240
           
Sbjct: 220  156

Query: 241  300
           
Sbjct: 280  156

Query: 301  352
           
Sbjct: 340  156

[Close]

BLAST of MU59377 vs. NCBI nr
Match: gi|659131841|ref|XP_008465883.1| (PREDICTED: uncharacterized protein LOC103503467 isoform X2 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 2.2e-41
Identity = 91/104 (87.50%), Postives = 91/104 (87.50%), Query Frame = 1


Query: 40  MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTXXXXXXXXXXXXXRPINMGAIP 99
           MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFT             RPINMGAIP
Sbjct: 1   MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60

Query: 100 VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 159
           VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG
Sbjct: 61  VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 104

Query: 160  219
           
Sbjct: 121  104

Query: 220  279
           
Sbjct: 181  104

Query: 280  339
           
Sbjct: 241  104

Query: 340  352
           
Sbjct: 301  104

[Close]

BLAST of MU59377 vs. NCBI nr
Match: gi|659131839|ref|XP_008465882.1| (PREDICTED: uncharacterized protein LOC103503467 isoform X1 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 2.2e-41
Identity = 91/104 (87.50%), Postives = 91/104 (87.50%), Query Frame = 1


Query: 40  MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTXXXXXXXXXXXXXRPINMGAIP 99
           MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFT             RPINMGAIP
Sbjct: 1   MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60

Query: 100 VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 159
           VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG
Sbjct: 61  VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 104

Query: 160  219
           
Sbjct: 121  104

Query: 220  279
           
Sbjct: 181  104

Query: 280  339
           
Sbjct: 241  104

Query: 340  352
           
Sbjct: 301  104

[Close]

BLAST of MU59377 vs. NCBI nr
Match: gi|449461259|ref|XP_004148359.1| (PREDICTED: uncharacterized protein LOC101209798 isoform X1 [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-38
Identity = 86/104 (82.69%), Postives = 88/104 (84.62%), Query Frame = 1


Query: 40  MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTXXXXXXXXXXXXXRPINMGAIP 99
           MEATSVS SKGTVIS+KG FRGIRIENPFTLKVGQIFT             RP+NMGAIP
Sbjct: 1   MEATSVSESKGTVISQKGHFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPMNMGAIP 60

Query: 100 VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 159
            MNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG
Sbjct: 61  GMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 104

Query: 160  219
           
Sbjct: 121  104

Query: 220  279
           
Sbjct: 181  104

Query: 280  339
           
Sbjct: 241  104

Query: 340  352
           
Sbjct: 301  104

[Close]

BLAST of MU59377 vs. NCBI nr
Match: gi|778688188|ref|XP_011652692.1| (PREDICTED: uncharacterized protein LOC101209798 isoform X2 [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-38
Identity = 86/104 (82.69%), Postives = 88/104 (84.62%), Query Frame = 1


Query: 40  MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTXXXXXXXXXXXXXRPINMGAIP 99
           MEATSVS SKGTVIS+KG FRGIRIENPFTLKVGQIFT             RP+NMGAIP
Sbjct: 1   MEATSVSESKGTVISQKGHFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPMNMGAIP 60

Query: 100 VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 159
            MNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG
Sbjct: 61  GMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVG 104

Query: 160  219
           
Sbjct: 121  104

Query: 220  279
           
Sbjct: 181  104

Query: 280  339
           
Sbjct: 241  104

Query: 340  352
           
Sbjct: 301  104

The following BLAST results are available for this feature:

BLAST of MU59377 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHI5_CUCSA	2.3e-45	82.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G912960 PE=4 SV=1	[more]
M5WBC1_PRUPE	5.3e-26	59.81	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009287mg PE=4 SV=1	[more]
A0A061GB21_THECC	1.6e-25	60.00	Dynamin-like 120 kDa protein, putative isoform 1 OS=Theobroma cacao GN=TCM_01588...	[more]
A0A059CI40_EUCGR	2.0e-25	57.28	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02124 PE=4 SV=1	[more]
A0A059CHW9_EUCGR	2.0e-25	57.28	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02124 PE=4 SV=1	[more]

BLAST of MU59377 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17540.1	4.2e-22	49.49	unknown protein	[more]

BLAST of MU59377 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700205331\|gb\|KGN60464.1\|	1.9e-45	82.91	hypothetical protein Csa_3G912960 [Cucumis sativus]	[more]
gi\|659131841\|ref\|XP_008465883.1\|	2.2e-41	87.50	PREDICTED: uncharacterized protein LOC103503467 isoform X2 [Cucumis melo]	[more]
gi\|659131839\|ref\|XP_008465882.1\|	2.2e-41	87.50	PREDICTED: uncharacterized protein LOC103503467 isoform X1 [Cucumis melo]	[more]
gi\|449461259\|ref\|XP_004148359.1\|	2.3e-38	82.69	PREDICTED: uncharacterized protein LOC101209798 isoform X1 [Cucumis sativus]	[more]
gi\|778688188\|ref\|XP_011652692.1\|	2.3e-38	82.69	PREDICTED: uncharacterized protein LOC101209798 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C003330	MELO3C003330	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
CI69H12	CI69H12	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36051	FAMILY NOT NAMED	coord: 6..104 score: 2.1