MU59368 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU59368
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTranslation initiation factor eIF-2B subunit epsilon
Locationchr5 : 25714009 .. 25714724 (+)
Sequence length714
The following sequences are available for this feature:

transcribed_cluster sequence

CAGAAGTACTCAGCCTGTTTACTGACAATTTTGACTACCAACATCTACGTCGTCATTTTGTCAAGGGCTTGCTTTTAGATGATGTATGTATTCCTTAATATGGACCTCTTACCTTTTTTTTTTAAACACAAATTTTAGTTTTTGTAAATTTAGCTTCTTTTTTTTCATTGCTAGTTTTTTTTTTGTTATTTTTCTTTTGATAAGTCCCTTTTTGTTTTTTGGTTGAGAAAAATGAAAGAATAAAAGGGCATAAAAAACAAGTGTGAATTCACCCATTCAAGGCTAGAAAGGGAATCCTGTGGAAGCAAATTATTAGAGCTTTTCTTCAGTCTATTTGGCTTGAGCGTAACAATCGCCTCTTCAACAACAAAGCTCAACACTTTGATGTCTTCCTTGACCACATGTTTTTTTTTTTATTGTAATCTCTTGGTGTATATTGTCTAAGCATTTCAACTCTTATAGTCTTGACTTGGAAGATCCTTTGGTTGGCAATTATTCGGGCTTTCTTTTGGCTTCTTTGGGGCGAGCAAGACAAGCGTTTTTTTCAAAACCATTTTTCTAGTTTTGATCTCTTTCATGATTTGGTTATTTCTATTGCGTTGTACTGGTGTAAAAATAGGCGCCCTTTTAAGCGCTTAAGTCTTTCTTATCTTGTCTCTTATTGACATATTTTTCTCTAATCACCTTTTGGTGCCGGGCTTTGCCCGTTGTTCC
Library categoryESTs
melon CI library1
BLAST of MU59368 vs. TrEMBL
Match: A5ASN4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031956 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.6e-07
Identity = 26/29 (89.66%), Postives = 29/29 (100.00%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDVC 62
           EVLS+FTDNFDYQHLRRHF+KGLL+DDVC
Sbjct: 271 EVLSIFTDNFDYQHLRRHFIKGLLVDDVC 299

Query: 63  90
           
Sbjct: 331 299

BLAST of MU59368 vs. TrEMBL
Match: A5C5Q2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009621 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.6e-07
Identity = 26/29 (89.66%), Postives = 29/29 (100.00%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDVC 62
           EVLS+FTDNFDYQHLRRHF+KGLL+DDVC
Sbjct: 236 EVLSIFTDNFDYQHLRRHFIKGLLVDDVC 264

Query: 63  90
           
Sbjct: 296 264

BLAST of MU59368 vs. TrEMBL
Match: V4T507_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019027mg PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.5e-06
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDV 62
           EVLSLFTDNFDYQHLRRHFVKGLLLDD+
Sbjct: 243 EVLSLFTDNFDYQHLRRHFVKGLLLDDI 270

Query: 63  87
           
Sbjct: 303 270

BLAST of MU59368 vs. TrEMBL
Match: V4TPH7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019027mg PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.5e-06
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDV 62
           EVLSLFTDNFDYQHLRRHFVKGLLLDD+
Sbjct: 243 EVLSLFTDNFDYQHLRRHFVKGLLLDDI 270

Query: 63  87
           
Sbjct: 303 270

BLAST of MU59368 vs. TrEMBL
Match: V4VQQ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019027mg PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.5e-06
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDV 62
           EVLSLFTDNFDYQHLRRHFVKGLLLDD+
Sbjct: 243 EVLSLFTDNFDYQHLRRHFVKGLLLDDI 270

Query: 63  87
           
Sbjct: 303 270

BLAST of MU59368 vs. TAIR10
Match: AT2G34970.1 (AT2G34970.1 Trimeric LpxA-like enzyme)

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-08
Identity = 24/28 (85.71%), Postives = 25/28 (89.29%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDV 62
           EVLSLF DNFDYQHLRRHFVKG+L+DD+
Sbjct: 244 EVLSLFEDNFDYQHLRRHFVKGVLVDDI 271

Query: 63  87
           
Sbjct: 304 271

BLAST of MU59368 vs. TAIR10
Match: AT4G18300.1 (AT4G18300.1 Trimeric LpxA-like enzyme)

HSP 1 Score: 54.7 bits (130), Expect = 9.1e-08
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDV 62
           EVLSLF DNFDYQH+RRHFV GLL+DD+
Sbjct: 234 EVLSLFEDNFDYQHMRRHFVNGLLVDDI 261

Query: 63  87
           
Sbjct: 294 261

BLAST of MU59368 vs. NCBI nr
Match: gi|147794334|emb|CAN78255.1| (hypothetical protein VITISV_031956 [Vitis vinifera])

HSP 1 Score: 64.3 bits (155), Expect = 3.3e-07
Identity = 26/29 (89.66%), Postives = 29/29 (100.00%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDVC 62
           EVLS+FTDNFDYQHLRRHF+KGLL+DDVC
Sbjct: 271 EVLSIFTDNFDYQHLRRHFIKGLLVDDVC 299

Query: 63  90
           
Sbjct: 331 299

BLAST of MU59368 vs. NCBI nr
Match: gi|147860302|emb|CAN79709.1| (hypothetical protein VITISV_009621 [Vitis vinifera])

HSP 1 Score: 64.3 bits (155), Expect = 3.3e-07
Identity = 26/29 (89.66%), Postives = 29/29 (100.00%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDVC 62
           EVLS+FTDNFDYQHLRRHF+KGLL+DDVC
Sbjct: 236 EVLSIFTDNFDYQHLRRHFIKGLLVDDVC 264

Query: 63  90
           
Sbjct: 296 264

BLAST of MU59368 vs. NCBI nr
Match: gi|951044640|ref|XP_014518698.1| (PREDICTED: translation initiation factor eIF-2B subunit epsilon-like isoform X1 [Vigna radiata var. radiata])

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDV 62
           EVLSLFTDNFDYQHLRRHFVKGLLLDD+
Sbjct: 276 EVLSLFTDNFDYQHLRRHFVKGLLLDDI 303

Query: 63  87
           
Sbjct: 336 303

BLAST of MU59368 vs. NCBI nr
Match: gi|307136048|gb|ADN33899.1| (eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Cucumis melo subsp. melo])

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDV 62
           EVLSLFTDNFDYQHLRRHFVKGLLLDD+
Sbjct: 237 EVLSLFTDNFDYQHLRRHFVKGLLLDDI 264

Query: 63  87
           
Sbjct: 297 264

BLAST of MU59368 vs. NCBI nr
Match: gi|659070548|ref|XP_008455617.1| (PREDICTED: translation initiation factor eIF-2B subunit epsilon isoform X2 [Cucumis melo])

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   EVLSLFTDNFDYQHLRRHFVKGLLLDDV 62
           EVLSLFTDNFDYQHLRRHFVKGLLLDD+
Sbjct: 237 EVLSLFTDNFDYQHLRRHFVKGLLLDDI 264

Query: 63  87
           
Sbjct: 297 264

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A5ASN4_VITVI8.6e-0789.66Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031956 PE=4 SV=1[more]
A5C5Q2_VITVI8.6e-0789.66Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009621 PE=4 SV=1[more]
V4T507_9ROSI2.5e-0696.43Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019027mg PE=4 SV=1[more]
V4TPH7_9ROSI2.5e-0696.43Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019027mg PE=4 SV=1[more]
V4VQQ4_9ROSI2.5e-0696.43Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019027mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G34970.13.1e-0885.71 Trimeric LpxA-like enzyme[more]
AT4G18300.19.1e-0882.14 Trimeric LpxA-like enzyme[more]
Match NameE-valueIdentityDescription
gi|147794334|emb|CAN78255.1|3.3e-0789.66hypothetical protein VITISV_031956 [Vitis vinifera][more]
gi|147860302|emb|CAN79709.1|3.3e-0789.66hypothetical protein VITISV_009621 [Vitis vinifera][more]
gi|951044640|ref|XP_014518698.1|1.2e-0696.43PREDICTED: translation initiation factor eIF-2B subunit epsilon-like isoform X1 ... [more]
gi|307136048|gb|ADN33899.1|1.2e-0696.43eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Cucumis melo subsp. melo... [more]
gi|659070548|ref|XP_008455617.1|1.2e-0696.43PREDICTED: translation initiation factor eIF-2B subunit epsilon isoform X2 [Cucu... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C004344MELO3C004344gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
CI69E08CI69E08EST