MU58561 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU58561
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Oxygen-evolving enhancer protein 3-1, chloroplastic
Location	chr4 : 10045223 .. 10046214 (-)
Sequence length	764

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AAATTAGAAGCTCTGCTTCTTCCTTTTGCTAATTTCCTCCGTTTCTCATCTTAGTCTTCCCATCAAATGGCTCGTCTTGCAAATTTAAACGGGAAATTCTCCGCCATTCCCAATCTCCCAAAGCTTCAAAACATTCATAAGAAACTCAAAATTACTGGGTTTCTCAAGAAACAAACGGATGTTTCTTCTCATCAAACCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATTGCTTTAGCTAACGAGTATTGGCTTGATGGCCCTTTGCTTGTCCCTTCTGTTGACAACAACATTGCGAATGAGCAAACAGGGACACGATCGTTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAAAAGGAAGAAAATACAGGTTGAAAAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTCAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTATGATTTTGACAAAGTTATCTCGGCAGCAGCAGACGATGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAATTTCGAAAAGCTTGAAAATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTACCAACAAACAACACCGATACTTCAAGAAGTCATGGATAGAATGGCATAAATTGAACAATTTATTGATCAGAAGCGTTTGGAGGAACTGCTTGCTTTTCC

Library


Library category	ESTs
melon CI library	1

Homology

[Close]

BLAST of MU58561 vs. Swiss-Prot
Match: PNSL3_ARATH (Photosynthetic NDH subunit of lumenal location 3, chloroplastic OS=Arabidopsis thaliana GN=PNSL3 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.5e-61
Identity = 121/220 (55.00%), Postives = 153/220 (69.55%), Query Frame = 1


Query: 67  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQXXXXXXXXXXXXVSVAL 126
           MA   +LN   + +P+LPKL    K  K +GF  ++T+                  +V++
Sbjct: 1   MAHFIDLNSLTNTLPSLPKLPESRKTGKSSGFACRRTEEFQEPDSVQITRRMTLGFAVSI 60

Query: 127 -----FGNASPEIALANEYWLDGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRK 186
                 G  +  +A  N +W+DGPL +P + NNI NE+TGTR+F+K G+Y+A+IGTKGR 
Sbjct: 61  GLTGILGENNVSLAQDNGFWIDGPLPIPPIYNNIVNEKTGTRTFIKKGVYVADIGTKGRM 120

Query: 187 YRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLAN 246
           YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFD +ISAAA ++KQPL DLAN
Sbjct: 121 YRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLAN 180

Query: 247 RLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 306
           RLFDNFEKLE+AAK KNL+ETES Y+ T  +LQEVM RMA
Sbjct: 181 RLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRMA 220

Query: 307  366
           
Sbjct: 241  220

Query: 367  426
           
Sbjct: 301  220

Query: 427  486
           
Sbjct: 361  220

Query: 487  546
           
Sbjct: 421  220

Query: 547  606
           
Sbjct: 481  220

Query: 607  666
           
Sbjct: 541  220

Query: 667  712
           
Sbjct: 601  220

[Close]

BLAST of MU58561 vs. Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 76.6 bits (187), Expect = 4.3e-13
Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 1


Query: 364 LKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVI 423
           LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ YD + +I
Sbjct: 109 LKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTII 168

Query: 424 SAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM 483
           S+   DEK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Sbjct: 169 SSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

Query: 484  543
           
Sbjct: 229  223

Query: 544  603
           
Sbjct: 289  223

Query: 604  663
           
Sbjct: 349  223

Query: 664  709
           
Sbjct: 409  223

[Close]

BLAST of MU58561 vs. Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-11
Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 1


Query: 310 VPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVR 369
           +P  DN+  ++       LK   YI  +       R K  A +++ +   I K    YV+
Sbjct: 99  LPGTDNS--DQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQ 158

Query: 370 KYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQ 429
             LRL+++++ YD + VISA   +EKQ L DL  +LF   + L+ AA+ K+  + E YY 
Sbjct: 159 NDLRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYS 218

Query: 430 QTTPILQEVMDRM 489
           +T   L  V+ ++
Sbjct: 219 ETVSSLNNVLAKL 229

Query: 490  549
           
Sbjct: 279  229

Query: 550  609
           
Sbjct: 339  229

Query: 610  669
           
Sbjct: 399  229

Query: 670  709
           
Sbjct: 459  229

[Close]

BLAST of MU58561 vs. Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.0e-11
Identity = 40/133 (30.08%), Postives = 71/133 (53.38%), Query Frame = 1


Query: 310 VPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVR 369
           +P  +N+    + GT  + K   Y+  +       R K  A ++L +   I +     ++
Sbjct: 100 LPGTENS-DQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQ 159

Query: 370 KYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQ 429
             LRL+++++ YD   VISA   DEK+ L +L ++LF + + L++AAK K+ +E E YY 
Sbjct: 160 NDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYG 219

Query: 430 QTTPILQEVMDRM 489
           QT   + EV+ ++
Sbjct: 220 QTVSNINEVLAKL 231

Query: 490  549
           
Sbjct: 280  231

Query: 550  609
           
Sbjct: 340  231

Query: 610  669
           
Sbjct: 400  231

Query: 670  709
           
Sbjct: 460  231

[Close]

BLAST of MU58561 vs. Swiss-Prot
Match: PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-10
Identity = 39/122 (31.97%), Postives = 64/122 (52.46%), Query Frame = 1


Query: 352 TRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMY 411
           TR F   LK   Y+  +       R+K  A D++ +  LI K    YV+  LRL+++++ 
Sbjct: 91  TRDFDLPLKERFYLQPLPPAEAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLR 150

Query: 412 YDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMD 471
           YD   VI++   +EK+ L +L  +LF   + L++AAK K+  E E Y+  T   L +V+ 
Sbjct: 151 YDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLA 210

Query: 472 RM 531
           ++
Sbjct: 211 KL 212

Query: 532  591
           
Sbjct: 271  212

Query: 592  651
           
Sbjct: 331  212

Query: 652  709
           
Sbjct: 391  212

[Close]

BLAST of MU58561 vs. TrEMBL
Match: A0A0A0L7N1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G414060 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 9.6e-105
Identity = 198/215 (92.09%), Postives = 200/215 (93.02%), Query Frame = 1


Query: 67  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQXXXXXXXXXXXXVSVAL 126
           MARLANLNGKFSAIPNLPKLQNIHK+LKITGFLKKQTDVSSHQ            VSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 127 FGNASPEIALANEYWLDGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK 186
           FGNASPEIA ANEYWLDGPL VPSVDNNI NEQTGTRSFLKTGIYIANIGTKGRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 187 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 246
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 247 FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 306
           FEKLE+AAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 215

Query: 307  366
           
Sbjct: 241  215

Query: 367  426
           
Sbjct: 301  215

Query: 427  486
           
Sbjct: 361  215

Query: 487  546
           
Sbjct: 421  215

Query: 547  606
           
Sbjct: 481  215

Query: 607  666
           
Sbjct: 541  215

Query: 667  712
           
Sbjct: 601  215

[Close]

BLAST of MU58561 vs. TrEMBL
Match: W9QQM8_9ROSA (Oxygen-evolving enhancer protein 3-1 OS=Morus notabilis GN=L484_021171 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 7.4e-65
Identity = 138/224 (61.61%), Postives = 161/224 (71.88%), Query Frame = 1


Query: 67  MARLANLNGKFSAIPN---LPKLQNIHKKLKITGFLKKQTD---VSSHQXXXXXXXXXXX 126
           MARLANLNG    +     LP L+   K+  I GF  K+ D    S H            
Sbjct: 1   MARLANLNGISETLAGALRLPSLRRTQKRANIVGFQGKKKDDHSQSEHNVQTTRRKLALG 60

Query: 127 XVSVALFGNAS---PEIALANEYWLDGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGT 186
             S+AL GN +     +A  N +W+DGPL VP+VDNNIANE+TGTRSFLK GIY+A+IGT
Sbjct: 61  LASIALVGNTTCNGVSLAEDNGFWIDGPLPVPTVDNNIANEKTGTRSFLKKGIYMADIGT 120

Query: 187 KGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLV 246
           K RKYRL+K AFDLLA+ DLIGKDTLNYV+KYLRLKSTFMYYDFDKVI+AA  D+KQPL 
Sbjct: 121 KNRKYRLRKCAFDLLALEDLIGKDTLNYVQKYLRLKSTFMYYDFDKVITAATVDDKQPLT 180

Query: 247 DLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 306
            LANRLFD+FEKLE A KQ+NL ETE++Y+ T  ILQEVMDRMA
Sbjct: 181 HLANRLFDSFEKLEGATKQRNLPETETFYKDTKVILQEVMDRMA 224

Query: 307  366
           
Sbjct: 241  224

Query: 367  426
           
Sbjct: 301  224

Query: 427  486
           
Sbjct: 361  224

Query: 487  546
           
Sbjct: 421  224

Query: 547  606
           
Sbjct: 481  224

Query: 607  666
           
Sbjct: 541  224

Query: 667  712
           
Sbjct: 601  224

[Close]

BLAST of MU58561 vs. TrEMBL
Match: A0A061FDQ5_THECC (PsbQ-like 1 OS=Theobroma cacao GN=TCM_031120 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.8e-64
Identity = 137/220 (62.27%), Postives = 157/220 (71.36%), Query Frame = 1


Query: 67  MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQXXXXXXXXXXXXVS 126
           M  LANLNG      AIP LP +Q   K  KI GFL K T+    Q             S
Sbjct: 1   MVHLANLNGITETLPAIPKLPSIQRSRKTAKIIGFLGKNTEDLREQPLQMTRRMALSLAS 60

Query: 127 VALFGNASPEIALA--NEYWLDGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRK 186
           +AL G +S  I+LA  N YW+   L VPSV+NNIANE+TGTRSF+K G+Y+AN+ TK R 
Sbjct: 61  IALVGTSSNSISLAEDNGYWITDLLPVPSVENNIANEKTGTRSFVKKGLYVANLNTKNRM 120

Query: 187 YRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLAN 246
           YRLKKYAFDLLAMADLIG  TL+YV+KYLRLKST MYYDFDK+ISAA  D+KQPL  LAN
Sbjct: 121 YRLKKYAFDLLAMADLIGPGTLSYVKKYLRLKSTVMYYDFDKIISAAPVDDKQPLTTLAN 180

Query: 247 RLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 306
           RLFD+FEKLE+AAK +NL +TES YQ T  ILQEVMDRMA
Sbjct: 181 RLFDSFEKLEDAAKTRNLPQTESCYQNTKVILQEVMDRMA 220

Query: 307  366
           
Sbjct: 241  220

Query: 367  426
           
Sbjct: 301  220

Query: 427  486
           
Sbjct: 361  220

Query: 487  546
           
Sbjct: 421  220

Query: 547  606
           
Sbjct: 481  220

Query: 607  666
           
Sbjct: 541  220

Query: 667  712
           
Sbjct: 601  220

[Close]

BLAST of MU58561 vs. TrEMBL
Match: A0A068UC11_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021098001 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.6e-62
Identity = 134/220 (60.91%), Postives = 153/220 (69.55%), Query Frame = 1


Query: 67  MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQXXXXXXXXXXXXVS 126
           MAR  NL+G    FS IP L +++NI KK     FL K+TD                  S
Sbjct: 1   MARATNLSGIFEAFSIIPKLHEVENIRKKATDVNFLSKRTDELQEDTLQTTRRLALGLAS 60

Query: 127 VALFGN---ASPEIALANEYWLDGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGR 186
           +A+F     A   +A  N YWL GP+ VPS  N I NE TGTRSFLK GIYIANIGTKGR
Sbjct: 61  LAIFSTSRAAGISLAEDNGYWLTGPIPVPSAKNKITNEDTGTRSFLKRGIYIANIGTKGR 120

Query: 187 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLA 246
            +RLKKYAFDLLA+ DLIG DT NYV KYLRLKSTFMY+DFD+VI+AAAD EKQPL DLA
Sbjct: 121 MHRLKKYAFDLLALEDLIGPDTFNYVLKYLRLKSTFMYFDFDEVITAAADGEKQPLTDLA 180

Query: 247 NRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM 306
           NRLFD+ EKLE+AAK +NL  T+S YQ TT ILQEVM+RM
Sbjct: 181 NRLFDSVEKLEDAAKNQNLPRTQSLYQDTTVILQEVMNRM 220

Query: 307  366
           
Sbjct: 241  220

Query: 367  426
           
Sbjct: 301  220

Query: 427  486
           
Sbjct: 361  220

Query: 487  546
           
Sbjct: 421  220

Query: 547  606
           
Sbjct: 481  220

Query: 607  666
           
Sbjct: 541  220

Query: 667  709
           
Sbjct: 601  220

[Close]

BLAST of MU58561 vs. TrEMBL
Match: A0A067KS41_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00798 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.9e-62
Identity = 136/221 (61.54%), Postives = 159/221 (71.95%), Query Frame = 1


Query: 67  MARLANLNGKFSAIPNLPKLQN---IHKKLKITGFL-KKQTDVSSHQXXXXXXXXXXXXV 126
           MA L+NLNG    +P  PKL N     K+ KI GFL KKQ +    Q             
Sbjct: 1   MAYLSNLNGITETLPATPKLTNKQKTQKRTKIIGFLGKKQVNFDQEQSFHTTRRLALGLA 60

Query: 127 SVALFGNASPEIALA--NEYWL-DGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGTKG 186
           S+AL GN    I+LA  N +WL D PL  P+VDN IANE+TGTRSF+K G+Y+ANIG  G
Sbjct: 61  SIALTGNFGNGISLAEDNGFWLLDFPLPSPTVDNKIANEKTGTRSFIKKGVYMANIGVAG 120

Query: 187 RKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDL 246
             YR++KYAFDLLA+ DLIG DTLNYVRKYLRLKSTFMYYDFDKVISAA  ++KQPL DL
Sbjct: 121 SMYRIRKYAFDLLALEDLIGPDTLNYVRKYLRLKSTFMYYDFDKVISAAPVNDKQPLTDL 180

Query: 247 ANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM 306
           ANRLFDNFE+LE+A+++KNL +TES YQ T  ILQEVMDRM
Sbjct: 181 ANRLFDNFEELEDASRRKNLPQTESSYQGTKVILQEVMDRM 221

Query: 307  366
           
Sbjct: 241  221

Query: 367  426
           
Sbjct: 301  221

Query: 427  486
           
Sbjct: 361  221

Query: 487  546
           
Sbjct: 421  221

Query: 547  606
           
Sbjct: 481  221

Query: 607  666
           
Sbjct: 541  221

Query: 667  709
           
Sbjct: 601  221

[Close]

BLAST of MU58561 vs. TAIR10
Match: AT3G01440.1 (AT3G01440.1 PsbQ-like 1)

HSP 1 Score: 235.7 bits (600), Expect = 3.1e-62
Identity = 121/220 (55.00%), Postives = 153/220 (69.55%), Query Frame = 1


Query: 67  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQXXXXXXXXXXXXVSVAL 126
           MA   +LN   + +P+LPKL    K  K +GF  ++T+                  +V++
Sbjct: 1   MAHFIDLNSLTNTLPSLPKLPESRKTGKSSGFACRRTEEFQEPDSVQITRRMTLGFAVSI 60

Query: 127 -----FGNASPEIALANEYWLDGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRK 186
                 G  +  +A  N +W+DGPL +P + NNI NE+TGTR+F+K G+Y+A+IGTKGR 
Sbjct: 61  GLTGILGENNVSLAQDNGFWIDGPLPIPPIYNNIVNEKTGTRTFIKKGVYVADIGTKGRM 120

Query: 187 YRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLAN 246
           YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFD +ISAAA ++KQPL DLAN
Sbjct: 121 YRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLAN 180

Query: 247 RLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 306
           RLFDNFEKLE+AAK KNL+ETES Y+ T  +LQEVM RMA
Sbjct: 181 RLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRMA 220

Query: 307  366
           
Sbjct: 241  220

Query: 367  426
           
Sbjct: 301  220

Query: 427  486
           
Sbjct: 361  220

Query: 487  546
           
Sbjct: 421  220

Query: 547  606
           
Sbjct: 481  220

Query: 607  666
           
Sbjct: 541  220

Query: 667  712
           
Sbjct: 601  220

[Close]

BLAST of MU58561 vs. TAIR10
Match: AT4G21280.2 (AT4G21280.2 photosystem II subunit QA)

HSP 1 Score: 76.6 bits (187), Expect = 2.4e-14
Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 1


Query: 364 LKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVI 423
           LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ YD + +I
Sbjct: 109 LKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTII 168

Query: 424 SAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM 483
           S+   DEK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Sbjct: 169 SSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

Query: 484  543
           
Sbjct: 229  223

Query: 544  603
           
Sbjct: 289  223

Query: 604  663
           
Sbjct: 349  223

Query: 664  709
           
Sbjct: 409  223

[Close]

BLAST of MU58561 vs. TAIR10
Match: AT4G05180.1 (AT4G05180.1 photosystem II subunit Q-2)

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 1


Query: 310 VPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVR 369
           +P  DN+  ++       LK   YI  +       R K  A +++ +   I K    YV+
Sbjct: 99  LPGTDNS--DQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQ 158

Query: 370 KYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQ 429
             LRL+++++ YD + VISA   +EKQ L DL  +LF   + L+ AA+ K+  + E YY 
Sbjct: 159 NDLRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYS 218

Query: 430 QTTPILQEVMDRM 489
           +T   L  V+ ++
Sbjct: 219 ETVSSLNNVLAKL 229

Query: 490  549
           
Sbjct: 279  229

Query: 550  609
           
Sbjct: 339  229

Query: 610  669
           
Sbjct: 399  229

Query: 670  709
           
Sbjct: 459  229

[Close]

BLAST of MU58561 vs. NCBI nr
Match: gi|659109145|ref|XP_008454569.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 392.5 bits (1007), Expect = 5.6e-106
Identity = 201/215 (93.49%), Postives = 201/215 (93.49%), Query Frame = 1


Query: 67  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQXXXXXXXXXXXXVSVAL 126
           MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQ            VSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 127 FGNASPEIALANEYWLDGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK 186
           FGNASPEIA ANEYWLDGPL VPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 187 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 246
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 247 FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 306
           FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 215

Query: 307  366
           
Sbjct: 241  215

Query: 367  426
           
Sbjct: 301  215

Query: 427  486
           
Sbjct: 361  215

Query: 487  546
           
Sbjct: 421  215

Query: 547  606
           
Sbjct: 481  215

Query: 607  666
           
Sbjct: 541  215

Query: 667  712
           
Sbjct: 601  215

[Close]

BLAST of MU58561 vs. NCBI nr
Match: gi|449468510|ref|XP_004151964.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 1.4e-104
Identity = 198/215 (92.09%), Postives = 200/215 (93.02%), Query Frame = 1


Query: 67  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQXXXXXXXXXXXXVSVAL 126
           MARLANLNGKFSAIPNLPKLQNIHK+LKITGFLKKQTDVSSHQ            VSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 127 FGNASPEIALANEYWLDGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK 186
           FGNASPEIA ANEYWLDGPL VPSVDNNI NEQTGTRSFLKTGIYIANIGTKGRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 187 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 246
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 247 FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 306
           FEKLE+AAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 215

Query: 307  366
           
Sbjct: 241  215

Query: 367  426
           
Sbjct: 301  215

Query: 427  486
           
Sbjct: 361  215

Query: 487  546
           
Sbjct: 421  215

Query: 547  606
           
Sbjct: 481  215

Query: 607  666
           
Sbjct: 541  215

Query: 667  712
           
Sbjct: 601  215

[Close]

BLAST of MU58561 vs. NCBI nr
Match: gi|645278675|ref|XP_008244339.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Prunus mume])

HSP 1 Score: 270.4 bits (690), Expect = 3.2e-69
Identity = 142/220 (64.55%), Postives = 166/220 (75.45%), Query Frame = 1


Query: 67  MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQXXXXXXXXXXXXVS 126
           MA LANLNG      AIP LP +Q   K++ I GF+ K+ D    Q             S
Sbjct: 1   MAHLANLNGVSETLPAIPRLPGIQWTQKRVSIVGFMGKKKDDLQEQPLHTTRRLALGLAS 60

Query: 127 VALFGNASPEIALA--NEYWLDGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRK 186
           +AL GN+   ++LA  N +W+DGPL VPS +N IANE+TGTRSFLK G+Y+ANIGTKGRK
Sbjct: 61  IALVGNSCNGVSLAEGNGFWIDGPLPVPSAENKIANEKTGTRSFLKKGLYMANIGTKGRK 120

Query: 187 YRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLAN 246
           +RLKKYAFDLLAMADLI +DTLNYVR++LRLKSTFMY+DFD+VISAA  DEKQPL DLAN
Sbjct: 121 FRLKKYAFDLLAMADLIAQDTLNYVRRFLRLKSTFMYFDFDQVISAAPVDEKQPLTDLAN 180

Query: 247 RLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 306
           RLFD  EKL+ A KQ+NLSETESYY+ TT ILQEVMDRMA
Sbjct: 181 RLFDTVEKLDGAVKQRNLSETESYYKDTTVILQEVMDRMA 220

Query: 307  366
           
Sbjct: 241  220

Query: 367  426
           
Sbjct: 301  220

Query: 427  486
           
Sbjct: 361  220

Query: 487  546
           
Sbjct: 421  220

Query: 547  606
           
Sbjct: 481  220

Query: 607  666
           
Sbjct: 541  220

Query: 667  712
           
Sbjct: 601  220

[Close]

BLAST of MU58561 vs. NCBI nr
Match: gi|470116327|ref|XP_004294334.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 262.3 bits (669), Expect = 8.7e-67
Identity = 142/222 (63.96%), Postives = 164/222 (73.87%), Query Frame = 1


Query: 67  MARLANLNGKFSAIP---NLPKLQNIHKKLKITGFLKKQTDVSS-HQXXXXXXXXXXXXV 126
           MA+LANLNG    +P    LP +Q   K++ I G L K+ D     Q             
Sbjct: 1   MAQLANLNGISETLPVLHRLPSIQKTRKRVSIIGCLGKKKDHDVLEQPLQTTRRLALGLA 60

Query: 127 SVALFGNASPEIALA---NEYWLDGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGTKG 186
           S+AL GN+S E ALA   N +WLDGPL VPS DN IANE+TGTRSFLK  +Y+A+IGTKG
Sbjct: 61  SIALVGNSSSEAALAEGNNGFWLDGPLPVPSADNKIANEETGTRSFLKNHLYMADIGTKG 120

Query: 187 RKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDL 246
           RKYRLKKYAFDLLAMADLI +DTLNYV+KYLRLKSTFMY+DFDKVI+AA   EKQPL DL
Sbjct: 121 RKYRLKKYAFDLLAMADLIAQDTLNYVQKYLRLKSTFMYFDFDKVITAAPVTEKQPLTDL 180

Query: 247 ANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 306
           ANRLF+  EKL+ A +Q+NLSETE+YYQ TT ILQEVMDRMA
Sbjct: 181 ANRLFNTVEKLDGAVRQRNLSETETYYQDTTVILQEVMDRMA 222

Query: 307  366
           
Sbjct: 241  222

Query: 367  426
           
Sbjct: 301  222

Query: 427  486
           
Sbjct: 361  222

Query: 487  546
           
Sbjct: 421  222

Query: 547  606
           
Sbjct: 481  222

Query: 607  666
           
Sbjct: 541  222

Query: 667  712
           
Sbjct: 601  222

[Close]

BLAST of MU58561 vs. NCBI nr
Match: gi|694353220|ref|XP_009358084.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 261.9 bits (668), Expect = 1.1e-66
Identity = 140/220 (63.64%), Postives = 161/220 (73.18%), Query Frame = 1


Query: 67  MARLANLNGKFSAIPNLPK---LQNIHKKLKITGFLKKQTDVSSHQXXXXXXXXXXXXVS 126
           MARLANLNG    +P LP+   +Q   KK  I  F  K++D    Q             S
Sbjct: 1   MARLANLNGVSETLPVLPRFPSVQTTRKKASIICFTGKKSDDFQEQPLQTTRRIALGLAS 60

Query: 127 VALFGNASPEIALA--NEYWLDGPLLVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRK 186
           VAL GN    ++LA  N +WLDGPL VPS  N IANE+TGTRSFLK G+Y+ANIGTKGRK
Sbjct: 61  VALVGNFCNGVSLAEGNGFWLDGPLPVPSAQNKIANEKTGTRSFLKRGLYMANIGTKGRK 120

Query: 187 YRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLAN 246
           +RLKKYAFDLLAMADLI KDTLNYVR+YLRLKSTFMY+DFD+VISAA  DEKQPL DLAN
Sbjct: 121 FRLKKYAFDLLAMADLIAKDTLNYVRRYLRLKSTFMYFDFDQVISAAPVDEKQPLTDLAN 180

Query: 247 RLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 306
           RLFD  EKL+ A KQ++L  TE+YY+ TT +LQEVMDRMA
Sbjct: 181 RLFDTVEKLDGAVKQRDLPRTETYYKDTTVVLQEVMDRMA 220

Query: 307  366
           
Sbjct: 241  220

Query: 367  426
           
Sbjct: 301  220

Query: 427  486
           
Sbjct: 361  220

Query: 487  546
           
Sbjct: 421  220

Query: 547  606
           
Sbjct: 481  220

Query: 607  666
           
Sbjct: 541  220

Query: 667  712
           
Sbjct: 601  220

The following BLAST results are available for this feature:

BLAST of MU58561 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PNSL3_ARATH	5.5e-61	55.00	Photosynthetic NDH subunit of lumenal location 3, chloroplastic OS=Arabidopsis t...	[more]
PSBQ1_ARATH	4.3e-13	34.78	Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=P...	[more]
PSBQ2_ARATH	2.3e-11	30.83	Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=P...	[more]
PSBQ_SPIOL	3.0e-11	30.08	Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ P...	[more]
PSBQ2_MAIZE	1.5e-10	31.97	Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV...	[more]

BLAST of MU58561 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7N1_CUCSA	9.6e-105	92.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G414060 PE=4 SV=1	[more]
W9QQM8_9ROSA	7.4e-65	61.61	Oxygen-evolving enhancer protein 3-1 OS=Morus notabilis GN=L484_021171 PE=4 SV=1	[more]
A0A061FDQ5_THECC	4.8e-64	62.27	PsbQ-like 1 OS=Theobroma cacao GN=TCM_031120 PE=4 SV=1	[more]
A0A068UC11_COFCA	2.6e-62	60.91	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021098001 PE=4 SV=1	[more]
A0A067KS41_JATCU	5.9e-62	61.54	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00798 PE=4 SV=1	[more]

BLAST of MU58561 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G01440.1	3.1e-62	55.00	PsbQ-like 1	[more]
AT4G21280.2	2.4e-14	34.78	photosystem II subunit QA	[more]
AT4G05180.1	1.3e-12	30.83	photosystem II subunit Q-2	[more]

BLAST of MU58561 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109145\|ref\|XP_008454569.1\|	5.6e-106	93.49	PREDICTED: psbQ-like protein 2, chloroplastic [Cucumis melo]	[more]
gi\|449468510\|ref\|XP_004151964.1\|	1.4e-104	92.09	PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucu...	[more]
gi\|645278675\|ref\|XP_008244339.1\|	3.2e-69	64.55	PREDICTED: psbQ-like protein 2, chloroplastic [Prunus mume]	[more]
gi\|470116327\|ref\|XP_004294334.1\|	8.7e-67	63.96	PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Frag...	[more]
gi\|694353220\|ref\|XP_009358084.1\|	1.1e-66	63.64	PREDICTED: psbQ-like protein 2, chloroplastic [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR008797	PSII_PsbQ
IPR023222	PsbQ-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0009523	photosystem II
GO:0009654	photosystem II oxygen evolving complex
GO:0019898	extrinsic component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009654	photosystem II oxygen evolving complex
molecular_function	GO:0005509	calcium ion binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C018131	MELO3C018131	gene
MELO3C018132	MELO3C018132	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
CI30D05	CI30D05	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008797	Oxygen-evolving enhancer protein 3	PFAM	PF05757	PsbQ	coord: 36..215 score: 2.8
IPR023222	PsbQ-like domain	GENE3D	G3DSA:1.20.120.290		coord: 86..215 score: 4.0
IPR023222	PsbQ-like domain	unknown	SSF101112	Oxygen-evolving enhancer protein 3,	coord: 105..215 score: 7.85
None	No IPR available	PANTHER	PTHR33399	FAMILY NOT NAMED	coord: 1..215 score: 7.4E
None	No IPR available	PANTHER	PTHR33399:SF2	PSBQ-LIKE PROTEIN 2, CHLOROPLASTIC	coord: 1..215 score: 7.4E