MU58482 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU58482
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionE3 ubiquitin-protein ligase ATL42
Locationchr2 : 19420246 .. 19420588 (-)
Sequence length342
The following sequences are available for this feature:

transcribed_cluster sequence

AATTTTAACAGAAAAGTTGAAAATGGGGAATCTTCTGATCTGGAAAGCAGTGTAAAGCAAGAAAGAATGAGGAAAATTTGGTACCCAATTGCTAAAAGAACAGTTCAATGGTTTGCTAATAGAGAAAAAAGGTTTCAAACAGCTGAGAACAGACAACAAATAGTAGAAACAGTATAAATCAAACCAGTTCTTTTACCTTTTCTCTTCAATTAAATTTCTTTTGTAGTTTCCTTTTACTGGGTCCCCAACTAGGTCCCAAATTTAGAGAACTTTTAGTTTAGATATTTAAAGAAGTGGATTTCTTTTAAATGTTACTATACAATTCATAAGTTCTTAGACTCT
Library categoryESTs
melon CI library1
BLAST of MU58482 vs. TrEMBL
Match: A0A0B2PZH0_GLYSO (E3 ubiquitin-protein ligase ATL42 OS=Glycine soja GN=glysoja_045770 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-08
Identity = 26/44 (59.09%), Postives = 39/44 (88.64%), Query Frame = 1

Query: 28  ESSDLESSVKQERMRKIWYPIAKRTVQWFANREKRFQTAENRQQ 87
           +SS L++++K+ERMR+IW+PIA+RT QWF NRE+R Q ++N+QQ
Sbjct: 379 DSSSLQNNLKEERMRQIWFPIARRTAQWFVNRERRSQQSQNKQQ 422

Query: 88  147
           
Sbjct: 439 422

Query: 148 160
           
Sbjct: 499 422

BLAST of MU58482 vs. TrEMBL
Match: I1J804_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G146500 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-08
Identity = 26/44 (59.09%), Postives = 39/44 (88.64%), Query Frame = 1

Query: 28  ESSDLESSVKQERMRKIWYPIAKRTVQWFANREKRFQTAENRQQ 87
           +SS L++++K+ERMR+IW+PIA+RT QWF NRE+R Q ++N+QQ
Sbjct: 379 DSSSLQNNLKEERMRQIWFPIARRTAQWFVNRERRSQQSQNKQQ 422

Query: 88  147
           
Sbjct: 439 422

Query: 148 160
           
Sbjct: 499 422

BLAST of MU58482 vs. TrEMBL
Match: M5W8V8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019638mg PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-07
Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 1

Query: 1   NFNRKVENGESSDLESSVKQERMRKIWYPIAKRTVQWFANREKRFQ 60
           N   K  N E S LE++VK+ERMR++W PIA+RTVQWFANREKR Q
Sbjct: 368 NLGFKNRNKEPSLLENNVKEERMRRLWLPIARRTVQWFANREKRTQ 413

Query: 61  120
           
Sbjct: 428 413

Query: 121 139
           
Sbjct: 488 413

BLAST of MU58482 vs. TrEMBL
Match: W9SL42_9ROSA (E3 ubiquitin-protein ligase ATL42 OS=Morus notabilis GN=L484_003663 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-07
Identity = 30/43 (69.77%), Postives = 37/43 (86.05%), Query Frame = 1

Query: 25  GESSDL-ESSVKQERMRKIWYPIAKRTVQWFANREKRFQTAEN 84
           GESS L E++VK+ERMR+ W PIA+RTVQWFANREKR Q ++N
Sbjct: 391 GESSSLFENNVKEERMRRAWLPIARRTVQWFANREKRSQLSQN 433

Query: 85  144
           
Sbjct: 451 433

Query: 145 151
           
Sbjct: 511 433

BLAST of MU58482 vs. TrEMBL
Match: G7KNZ9_MEDTR (RING-H2 finger protein ATL4J OS=Medicago truncatula GN=MTR_6g087150 PE=4 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 1.9e-07
Identity = 25/44 (56.82%), Postives = 38/44 (86.36%), Query Frame = 1

Query: 28  ESSDLESSVKQERMRKIWYPIAKRTVQWFANREKRFQTAENRQQ 87
           +SS +E+++K+ER RK+W+PIA+RT +WF NREKR Q ++N+QQ
Sbjct: 328 DSSFVENNLKEERRRKLWFPIARRTAEWFVNREKRSQQSQNKQQ 371

Query: 88  147
           
Sbjct: 388 371

Query: 148 160
           
Sbjct: 448 371

BLAST of MU58482 vs. TAIR10
Match: AT4G28890.1 (AT4G28890.1 RING/U-box superfamily protein)

HSP 1 Score: 47.0 bits (110), Expect = 9.1e-06
Identity = 19/33 (57.58%), Postives = 22/33 (66.67%), Query Frame = 1

Query: 58  QERMRKIWYPIAKRTVQWFANREKRFQTAENRQ 117
           +ER R++W PIA++T QWFANREKR Q     Q
Sbjct: 396 EERRRRLWLPIARKTAQWFANREKRSQINTTHQ 428

Query: 118 157
           
Sbjct: 456 428

BLAST of MU58482 vs. NCBI nr
Match: gi|659125458|ref|XP_008462695.1| (PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis melo])

HSP 1 Score: 118.2 bits (295), Expect = 9.1e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1

Query: 1   NFNRKVENGESSDLESSVKQERMRKIWYPIAKRTVQWFANREKRFQTAENRQQIVETV 60
           NFNRKVENGESSDLESSVKQERMRKIWYPIAKRTVQWFANREKRFQTAENRQQIVETV
Sbjct: 379 NFNRKVENGESSDLESSVKQERMRKIWYPIAKRTVQWFANREKRFQTAENRQQIVETV 436

Query: 61  120
           
Sbjct: 439 436

Query: 121 175
           
Sbjct: 499 436

BLAST of MU58482 vs. NCBI nr
Match: gi|778730590|ref|XP_004151734.2| (PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20
Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 1

Query: 1   NFNRKVENGESSDLESSVKQERMRKIWYPIAKRTVQWFANREKRFQTAENRQQIVETV 60
           NFNRK +NGESSDLES+VKQERMR+IWYPIAKRTVQWFANRE RFQTAENRQQIVE V
Sbjct: 376 NFNRKFKNGESSDLESNVKQERMREIWYPIAKRTVQWFANRETRFQTAENRQQIVEAV 433

Query: 61  120
           
Sbjct: 436 433

Query: 121 175
           
Sbjct: 496 433

BLAST of MU58482 vs. NCBI nr
Match: gi|778730834|ref|XP_011659864.1| (PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20
Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 1

Query: 1   NFNRKVENGESSDLESSVKQERMRKIWYPIAKRTVQWFANREKRFQTAENRQQIVETV 60
           NFNRK +NGESSDLES+VKQERMR+IWYPIAKRTVQWFANRE RFQTAENRQQIVE V
Sbjct: 376 NFNRKFKNGESSDLESNVKQERMREIWYPIAKRTVQWFANRETRFQTAENRQQIVEAV 433

Query: 61  120
           
Sbjct: 436 433

Query: 121 175
           
Sbjct: 496 433

BLAST of MU58482 vs. NCBI nr
Match: gi|356496420|ref|XP_003517066.1| (PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max])

HSP 1 Score: 65.5 bits (158), Expect = 7.0e-08
Identity = 26/44 (59.09%), Postives = 39/44 (88.64%), Query Frame = 1

Query: 28  ESSDLESSVKQERMRKIWYPIAKRTVQWFANREKRFQTAENRQQ 87
           +SS L++++K+ERMR+IW+PIA+RT QWF NRE+R Q ++N+QQ
Sbjct: 379 DSSSLQNNLKEERMRQIWFPIARRTAQWFVNRERRSQQSQNKQQ 422

Query: 88  147
           
Sbjct: 439 422

Query: 148 160
           
Sbjct: 499 422

BLAST of MU58482 vs. NCBI nr
Match: gi|703140972|ref|XP_010107387.1| (E3 ubiquitin-protein ligase ATL42 [Morus notabilis])

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-07
Identity = 30/43 (69.77%), Postives = 37/43 (86.05%), Query Frame = 1

Query: 25  GESSDL-ESSVKQERMRKIWYPIAKRTVQWFANREKRFQTAEN 84
           GESS L E++VK+ERMR+ W PIA+RTVQWFANREKR Q ++N
Sbjct: 391 GESSSLFENNVKEERMRRAWLPIARRTVQWFANREKRSQLSQN 433

Query: 85  144
           
Sbjct: 451 433

Query: 145 151
           
Sbjct: 511 433

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0B2PZH0_GLYSO2.9e-0859.09E3 ubiquitin-protein ligase ATL42 OS=Glycine soja GN=glysoja_045770 PE=4 SV=1[more]
I1J804_SOYBN2.9e-0859.09Uncharacterized protein OS=Glycine max GN=GLYMA_01G146500 PE=4 SV=1[more]
M5W8V8_PRUPE1.1e-0765.22Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019638mg PE=4 SV=1[more]
W9SL42_9ROSA1.4e-0769.77E3 ubiquitin-protein ligase ATL42 OS=Morus notabilis GN=L484_003663 PE=4 SV=1[more]
G7KNZ9_MEDTR1.9e-0756.82RING-H2 finger protein ATL4J OS=Medicago truncatula GN=MTR_6g087150 PE=4 SV=2[more]
Match NameE-valueIdentityDescription
AT4G28890.19.1e-0657.58 RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659125458|ref|XP_008462695.1|9.1e-24100.00PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis melo][more]
gi|778730590|ref|XP_004151734.2|1.2e-2089.66PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis sativus][more]
gi|778730834|ref|XP_011659864.1|1.2e-2089.66PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis sativus][more]
gi|356496420|ref|XP_003517066.1|7.0e-0859.09PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max][more]
gi|703140972|ref|XP_010107387.1|3.5e-0769.77E3 ubiquitin-protein ligase ATL42 [Morus notabilis][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C024638MELO3C024638gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
CI26H06CI26H06EST