MU58406 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU58406
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTubby-like F-box protein
Locationchr6 : 10760687 .. 10761112 (+)
Sequence length425
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GCTCCAACCCCATCTCAACCAGGCCCACCCGAGCACGACAAGATCATTCTTCAATTTGGGAAGGTTGGTAAAGACATGTTCACGATGGATTATCGATATCCGTTGTCTGCTTTTCAGGCCTTTGCTATATGCTTGAGCAGCTTTGATACCAAATTGGCTTGTGAATAAAGAAAAGTATCCAAAGTAATGCATATGATGAGCAGAAAAAAAGTAACAAAACCCCCACTTTTATGGCCCCTTTTTCTTTTCTTTTTTATTTTCAACCCTCTTTTTAACTTTTGGATTTCACTCTATTAGTTGTATTCCTCTTGTCATTTCATGGCTAGGTTAGTGAAATAGTTCATTGTTGTGGCTATTGATGTAAAAGTTAATTGTAACTGTGACATCTTCAACCCCCTCATAACAGCTCTTACATGTGCAACTTC
Library
Library categoryESTs
melon CI library1
Homology
[Close]
BLAST of MU58406 vs. Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.6e-24
Identity = 52/55 (94.55%), Postives = 50/55 (90.91%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQP PPE DKIILQFGKV KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 391 APTPSQPAPPEQDKIILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445

Query: 61   120
           
Sbjct: 451  445

Query: 121  166
           
Sbjct: 511  445

[Close]
BLAST of MU58406 vs. Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22
Identity = 51/58 (87.93%), Postives = 51/58 (87.93%), Query Frame = 1 

Query: 1   APTPSQPGPP---EHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQP PP   +HDK+ILQFGKV KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 388 APTPSQPAPPPPPDHDKVILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445

Query: 61   120
           
Sbjct: 448  445

Query: 121  166
           
Sbjct: 508  445

[Close]
BLAST of MU58406 vs. Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.7e-22
Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQPGP + +K+ILQFGKV +DMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 394 APTPSQPGPADPEKVILQFGKVARDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 448

Query: 61   120
           
Sbjct: 454  448

Query: 121  166
           
Sbjct: 514  448

[Close]
BLAST of MU58406 vs. Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.2e-21
Identity = 50/58 (86.21%), Postives = 49/58 (84.48%), Query Frame = 1 

Query: 1   APTPSQP---GPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQP    PPEHDK+ILQFGKV KDMFTMDY YPLSAFQAFAI LSSFDTKLACE
Sbjct: 383 APTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLACE 440

Query: 61   120
           
Sbjct: 443  440

Query: 121  166
           
Sbjct: 503  440

[Close]
BLAST of MU58406 vs. Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-20
Identity = 49/55 (89.09%), Postives = 48/55 (87.27%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APT S P  PE DK+ILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 392 APT-SAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445

Query: 61   120
           
Sbjct: 452  445

Query: 121  166
           
Sbjct: 512  445

[Close]
BLAST of MU58406 vs. TrEMBL
Match: A0A0A0L6H9_CUCSA (Tubby-like F-box protein OS=Cucumis sativus GN=Csa_3G209470 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 374 APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 428

Query: 61   120
           
Sbjct: 434  428

Query: 121  166
           
Sbjct: 494  428

[Close]
BLAST of MU58406 vs. TrEMBL
Match: I1KUH5_SOYBN (Tubby-like F-box protein OS=Glycine max GN=GLYMA_08G183100 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.3e-23
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQP PPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 373 APTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427

Query: 61   120
           
Sbjct: 433  427

Query: 121  166
           
Sbjct: 493  427

[Close]
BLAST of MU58406 vs. TrEMBL
Match: A0A151T7U7_CAJCA (Tubby-like F-box protein OS=Cajanus cajan GN=KK1_017695 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.3e-23
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQP PPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 287 APTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 341

Query: 61   120
           
Sbjct: 347  341

Query: 121  166
           
Sbjct: 407  341

[Close]
BLAST of MU58406 vs. TrEMBL
Match: A0A0S3S1W7_PHAAN (Tubby-like F-box protein OS=Vigna angularis var. angularis GN=Vigan.05G012900 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.3e-23
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQP PPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 373 APTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427

Query: 61   120
           
Sbjct: 433  427

Query: 121  166
           
Sbjct: 493  427

[Close]
BLAST of MU58406 vs. TrEMBL
Match: V4T287_9ROSI (Tubby-like F-box protein OS=Citrus clementina GN=CICLE_v10001261mg PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.3e-23
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQP PPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 278 APTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 332

Query: 61   120
           
Sbjct: 338  332

Query: 121  166
           
Sbjct: 398  332

[Close]
BLAST of MU58406 vs. TAIR10
Match: AT1G25280.1 (AT1G25280.1 tubby like protein 10)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 49/55 (89.09%), Postives = 48/55 (87.27%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APT S P  PE DK+ILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 392 APT-SAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445

Query: 61   120
           
Sbjct: 452  445

Query: 121  166
           
Sbjct: 512  445

[Close]
BLAST of MU58406 vs. TAIR10
Match: AT1G43640.1 (AT1G43640.1 tubby like protein 5)

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 44/53 (83.02%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 7   TPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 66
           +P QP    HDKIIL FGKVGKDMFTMDYRYPLSAFQAFAI LS+FDTKLACE
Sbjct: 377 SPQQPEQSNHDKIILHFGKVGKDMFTMDYRYPLSAFQAFAISLSTFDTKLACE 429

Query: 67   126
           
Sbjct: 437  429

Query: 127  166
           
Sbjct: 497  429

[Close]
BLAST of MU58406 vs. TAIR10
Match: AT2G47900.3 (AT2G47900.3 tubby like protein 3)

HSP 1 Score: 90.9 bits (224), Expect = 6.8e-19
Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 1 

Query: 19  PGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 78
           P  PEH+ +ILQFGKVGKD+FTMDY+YP+SAFQAF ICLSSFDTK+ACE
Sbjct: 359 PAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 407

Query: 79   138
           
Sbjct: 419  407

Query: 139  166
           
Sbjct: 479  407

[Close]
BLAST of MU58406 vs. TAIR10
Match: AT1G76900.1 (AT1G76900.1 tubby like protein 1)

HSP 1 Score: 90.9 bits (224), Expect = 6.8e-19
Identity = 45/54 (83.33%), Postives = 45/54 (83.33%), Query Frame = 1 

Query: 4   PTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 63
           P+    GP   DKIILQFGKVGKDMFTMD+RYPLSAFQAFAICLSSFDTKLACE
Sbjct: 405 PSGQTDGP---DKIILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455

Query: 64   123
           
Sbjct: 465  455

Query: 124  166
           
Sbjct: 525  455

[Close]
BLAST of MU58406 vs. TAIR10
Match: AT2G18280.1 (AT2G18280.1 tubby like protein 2)

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-18
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 1 

Query: 25  PPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 84
           P EH+++ILQFGK+GKD+FTMDYRYPLSAFQAFAIC+SSFDTK ACE
Sbjct: 347 PEEHERVILQFGKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPACE 393

Query: 85   144
           
Sbjct: 407  393

Query: 145  166
           
Sbjct: 467  393

[Close]
BLAST of MU58406 vs. NCBI nr
Match: gi|778680121|ref|XP_004140690.2| (PREDICTED: tubby-like F-box protein 8 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 5.1e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 374 APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 428

Query: 61   120
           
Sbjct: 434  428

Query: 121  166
           
Sbjct: 494  428

[Close]
BLAST of MU58406 vs. NCBI nr
Match: gi|659112194|ref|XP_008456108.1| (PREDICTED: tubby-like F-box protein 8 [Cucumis melo])

HSP 1 Score: 119.4 bits (298), Expect = 5.1e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 374 APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 428

Query: 61   120
           
Sbjct: 434  428

Query: 121  166
           
Sbjct: 494  428

[Close]
BLAST of MU58406 vs. NCBI nr
Match: gi|951045096|ref|XP_014518830.1| (PREDICTED: tubby-like F-box protein 8 [Vigna radiata var. radiata])

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-23
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQP PPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 373 APTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427

Query: 61   120
           
Sbjct: 433  427

Query: 121  166
           
Sbjct: 493  427

[Close]
BLAST of MU58406 vs. NCBI nr
Match: gi|641831569|gb|KDO50624.1| (hypothetical protein CISIN_1g014405mg [Citrus sinensis])

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-23
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQP PPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 371 APTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 425

Query: 61   120
           
Sbjct: 431  425

Query: 121  166
           
Sbjct: 491  425

[Close]
BLAST of MU58406 vs. NCBI nr
Match: gi|920712777|gb|KOM54026.1| (hypothetical protein LR48_Vigan09g268500 [Vigna angularis])

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-23
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 1 

Query: 1   APTPSQPGPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 60
           APTPSQP PPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 373 APTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427

Query: 61   120
           
Sbjct: 433  427

Query: 121  166
           
Sbjct: 493  427

The following BLAST results are available for this feature:
BLAST of MU58406 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TLP8_ORYSJ8.6e-2494.55Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1[more]
TLP14_ORYSJ1.2e-2287.93Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1[more]
TLP3_ORYSJ4.7e-2287.27Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1[more]
TLP13_ORYSJ5.2e-2186.21Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1[more]
TLP10_ARATH2.0e-2089.09Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1[more]
BLAST of MU58406 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6H9_CUCSA4.6e-24100.00Tubby-like F-box protein OS=Cucumis sativus GN=Csa_3G209470 PE=3 SV=1[more]
I1KUH5_SOYBN2.3e-2398.18Tubby-like F-box protein OS=Glycine max GN=GLYMA_08G183100 PE=3 SV=1[more]
A0A151T7U7_CAJCA2.3e-2398.18Tubby-like F-box protein OS=Cajanus cajan GN=KK1_017695 PE=3 SV=1[more]
A0A0S3S1W7_PHAAN2.3e-2398.18Tubby-like F-box protein OS=Vigna angularis var. angularis GN=Vigan.05G012900 PE... [more]
V4T287_9ROSI2.3e-2398.18Tubby-like F-box protein OS=Citrus clementina GN=CICLE_v10001261mg PE=3 SV=1[more]
BLAST of MU58406 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G25280.11.1e-2189.09 tubby like protein 10[more]
AT1G43640.11.1e-1983.02 tubby like protein 5[more]
AT2G47900.36.8e-1979.59 tubby like protein 3[more]
AT1G76900.16.8e-1983.33 tubby like protein 1[more]
AT2G18280.11.2e-1882.98 tubby like protein 2[more]
BLAST of MU58406 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680121|ref|XP_004140690.2|5.1e-24100.00PREDICTED: tubby-like F-box protein 8 [Cucumis sativus][more]
gi|659112194|ref|XP_008456108.1|5.1e-24100.00PREDICTED: tubby-like F-box protein 8 [Cucumis melo][more]
gi|951045096|ref|XP_014518830.1|2.5e-2398.18PREDICTED: tubby-like F-box protein 8 [Vigna radiata var. radiata][more]
gi|641831569|gb|KDO50624.1|2.5e-2398.18hypothetical protein CISIN_1g014405mg [Citrus sinensis][more]
gi|920712777|gb|KOM54026.1|2.5e-2398.18hypothetical protein LR48_Vigan09g268500 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR000007Tubby_C
IPR018066Tubby_C_CS
IPR025659Tubby-like_C
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C019498MELO3C019498gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
CI22D11CI22D11EST


InterPro
Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000007Tubby, C-terminalPRINTSPR01573SUPERTUBBYcoord: 12..31
score: 7.3E-23coord: 33..55
score: 7.3
IPR000007Tubby, C-terminalGENE3DG3DSA:3.20.90.10coord: 11..49
score: 1.0
IPR000007Tubby, C-terminalPFAMPF01167Tubcoord: 11..49
score: 5.1
IPR018066Tubby, C-terminal, conserved sitePROSITEPS01201TUB_2coord: 40..55
scor
IPR025659Tubby C-terminal-like domainunknownSSF54518Tubby C-terminal domain-likecoord: 10..55
score: 4.45
NoneNo IPR availablePANTHERPTHR16517TUBBY-RELATEDcoord: 1..55
score: 3.6
NoneNo IPR availablePANTHERPTHR16517:SF45SUBFAMILY NOT NAMEDcoord: 1..55
score: 3.6