MU57669 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU57669
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Unknown protein
Location	chr11 : 14114604 .. 14115248 (+)
Sequence length	645

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GAAGTCTAACATTACCCCACCCTAAGGAAAATGTTCACTTGAAACTAACGAGGTCAGAAAAGAACTTAACTTCATGTACAAAATGATAAATATTATGTACCAGAGAGATCAGAATCCAAAATATACAATCTACTAATAATGTCTCTAACATCATCAGCAATGGAAGTTAACGTCAGTGAAAATCCAACTCCAAACTCACTTTCTTTTTCTTTTTTTTTTTTTCTTTGGCTTCTTTTTCCTAATTTACCTTGGAACAGAGAAGTACAAGATAATGGTCAAACCAACACTTACCTCATGGAAGAAGAGAGTGGACTGTCGAGAAGACATCAATGAAAATGTACAATACGAAGCTTGTCCCATTCGCGGTTTACACGGTGTTTAATCTCCTCTGAACCATTTCCTGCATCAATCTTTTGGCGGTTTCAGCTGCTTGATCTATGCCGTCGACTTCTGCTGCAATCTTGTAAACTATTCTCTCCAGATCTGCAGAGCTCATTGTCTTTTCCTGAGGAGAATCTCTGAGCAAATCCAGAAGCCTGCGAGCTCTCTCTTGAGCTTCAGTTGTGCCTTCTACAGTGAGTCTCAAAAGGCCAGGGATTGCACCTTCTTTCAAAATGGGTTCGCGGTATGTCTCACGGCAAGTCT

Library


Library category	ESTs
melon MNFG2 library	1

Homology

[Close]

BLAST of MU57669 vs. TrEMBL
Match: A0A0A0KFU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G113530 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.7e-33
Identity = 79/91 (86.81%), Postives = 79/91 (86.81%), Query Frame = -3


Query: 371 TCRETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSADLERIVY 430
           TCRETYREPILKEGAIPGLLRLTVEGTTEAQE           SPQEK MSSADLERIVY
Sbjct: 276 TCRETYREPILKEGAIPGLLRLTVEGTTEAQERARRLLDLLRDSPQEKRMSSADLERIVY 335

Query: 431 KIAAEVDGIDQAAETAKRLMQEMVQRRLNTV 490
           KIAAEVDGIDQAAETAKRLMQEMVQRRLNTV
Sbjct: 336 KIAAEVDGIDQAAETAKRLMQEMVQRRLNTV 366

Query: 491  550
           
Sbjct: 396  366

Query: 551  610
           
Sbjct: 456  366

Query: 611  644
           
Sbjct: 516  366

[Close]

BLAST of MU57669 vs. TrEMBL
Match: B9IAV5_POPTR (Armadillo/beta-catenin repeat family protein OS=Populus trichocarpa GN=POPTR_0014s16800g PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21
Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = -3


Query: 380 TCRETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSADLERIVY 439
           +CRE YRE ILKEGAIPGLLRLTVEGT++AQ+           +PQEK +SS+ LERIVY
Sbjct: 270 SCREKYRELILKEGAIPGLLRLTVEGTSKAQDRARTLLDLLRDTPQEKRLSSSVLERIVY 329

Query: 440 KIAAEVDGIDQAAETAKRLMQEMVQRRL 499
            IA  VDG D+AAETAKRL+Q+MVQR +
Sbjct: 330 NIATRVDGSDKAAETAKRLLQDMVQRSM 357

Query: 500  559
           
Sbjct: 390  357

Query: 560  619
           
Sbjct: 450  357

Query: 620  644
           
Sbjct: 510  357

[Close]

BLAST of MU57669 vs. TrEMBL
Match: V4W4T8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015636mg PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.3e-21
Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = -3


Query: 380 TCRETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSADLERIVY 439
           +CR+ YR+ ILKEGAIPGLLRLTVEGT EAQE           +PQEK +SS+ LE+IVY
Sbjct: 266 SCRDKYRQLILKEGAIPGLLRLTVEGTFEAQERARTLLDLLRDTPQEKRLSSSVLEKIVY 325

Query: 440 KIAAEVDGIDQAAETAKRLMQEMVQRRL 499
            IAA VDG D+AAETAKRL+Q+MVQR +
Sbjct: 326 DIAARVDGADKAAETAKRLLQDMVQRSM 353

Query: 500  559
           
Sbjct: 386  353

Query: 560  619
           
Sbjct: 446  353

Query: 620  644
           
Sbjct: 506  353

[Close]

BLAST of MU57669 vs. TrEMBL
Match: A0A067EIC5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017249mg PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.3e-21
Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = -3


Query: 380 TCRETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSADLERIVY 439
           +CR+ YR+ ILKEGAIPGLLRLTVEGT EAQE           +PQEK +SS+ LE+IVY
Sbjct: 266 SCRDKYRQLILKEGAIPGLLRLTVEGTFEAQERARTLLDLLRDTPQEKRLSSSVLEKIVY 325

Query: 440 KIAAEVDGIDQAAETAKRLMQEMVQRRL 499
            IAA VDG D+AAETAKRL+Q+MVQR +
Sbjct: 326 DIAARVDGADKAAETAKRLLQDMVQRSM 353

Query: 500  559
           
Sbjct: 386  353

Query: 560  619
           
Sbjct: 446  353

Query: 620  644
           
Sbjct: 506  353

[Close]

BLAST of MU57669 vs. TrEMBL
Match: A0A067E7B6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017249mg PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.3e-21
Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = -3


Query: 380 TCRETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSADLERIVY 439
           +CR+ YR+ ILKEGAIPGLLRLTVEGT EAQE           +PQEK +SS+ LE+IVY
Sbjct: 205 SCRDKYRQLILKEGAIPGLLRLTVEGTFEAQERARTLLDLLRDTPQEKRLSSSVLEKIVY 264

Query: 440 KIAAEVDGIDQAAETAKRLMQEMVQRRL 499
            IAA VDG D+AAETAKRL+Q+MVQR +
Sbjct: 265 DIAARVDGADKAAETAKRLLQDMVQRSM 292

Query: 500  559
           
Sbjct: 325  292

Query: 560  619
           
Sbjct: 385  292

Query: 620  644
           
Sbjct: 445  292

[Close]

BLAST of MU57669 vs. TAIR10
Match: AT4G12710.1 (AT4G12710.1 ARM repeat superfamily protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-17
Identity = 43/86 (50.00%), Postives = 60/86 (69.77%), Query Frame = -3


Query: 380 RETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSADLERIVYKI 439
           R+ YR+ ILKEGAIPGLL  TV+GT+++++           +P+EK M+   LE+IVY I
Sbjct: 291 RDKYRKLILKEGAIPGLLSSTVDGTSKSRDRARVLLDLLRETPREKEMTPLTLEKIVYGI 350

Query: 440 AAEVDGIDQAAETAKRLMQEMVQRRL 499
           A +VDG ++AAETAK+L+Q+MV R +
Sbjct: 351 AVQVDGAEKAAETAKKLLQDMVHRSM 376

Query: 500  559
           
Sbjct: 411  376

Query: 560  619
           
Sbjct: 471  376

Query: 620  638
           
Sbjct: 531  376

[Close]

BLAST of MU57669 vs. TAIR10
Match: AT3G03440.1 (AT3G03440.1 ARM repeat superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = -3


Query: 389 RETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSAD-LERIVYK 448
           R  YREPIL+EG IPGLL LTV+GT++++            S   ++    D +E IV  
Sbjct: 306 RSKYREPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLRNSESPRSEVQPDTIENIVSS 365

Query: 449 IAAEVDGIDQAAETAKRLMQEMVQ 508
           + + +DG DQ+ + AK+++ EMVQ
Sbjct: 366 LISHIDGDDQSGK-AKKMLAEMVQ 388

Query: 509  568
           
Sbjct: 426  388

Query: 569  628
           
Sbjct: 486  388

Query: 629  638
           
Sbjct: 546  388

[Close]

BLAST of MU57669 vs. NCBI nr
Match: gi|659094568|ref|XP_008448133.1| (PREDICTED: U-box domain-containing protein 14 [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 8.2e-34
Identity = 80/91 (87.91%), Postives = 80/91 (87.91%), Query Frame = -3


Query: 371 TCRETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSADLERIVY 430
           TCRETYREPILKEGAIPGLLRLTVEGTTEAQE           SPQEKTMSSADLERIVY
Sbjct: 276 TCRETYREPILKEGAIPGLLRLTVEGTTEAQERARRLLDLLRDSPQEKTMSSADLERIVY 335

Query: 431 KIAAEVDGIDQAAETAKRLMQEMVQRRLNTV 490
           KIAAEVDGIDQAAETAKRLMQEMVQRRLNTV
Sbjct: 336 KIAAEVDGIDQAAETAKRLMQEMVQRRLNTV 366

Query: 491  550
           
Sbjct: 396  366

Query: 551  610
           
Sbjct: 456  366

Query: 611  644
           
Sbjct: 516  366

[Close]

BLAST of MU57669 vs. NCBI nr
Match: gi|449444466|ref|XP_004139995.1| (PREDICTED: U-box domain-containing protein 45 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 4.1e-33
Identity = 79/91 (86.81%), Postives = 79/91 (86.81%), Query Frame = -3


Query: 371 TCRETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSADLERIVY 430
           TCRETYREPILKEGAIPGLLRLTVEGTTEAQE           SPQEK MSSADLERIVY
Sbjct: 276 TCRETYREPILKEGAIPGLLRLTVEGTTEAQERARRLLDLLRDSPQEKRMSSADLERIVY 335

Query: 431 KIAAEVDGIDQAAETAKRLMQEMVQRRLNTV 490
           KIAAEVDGIDQAAETAKRLMQEMVQRRLNTV
Sbjct: 336 KIAAEVDGIDQAAETAKRLMQEMVQRRLNTV 366

Query: 491  550
           
Sbjct: 396  366

Query: 551  610
           
Sbjct: 456  366

Query: 611  644
           
Sbjct: 516  366

[Close]

BLAST of MU57669 vs. NCBI nr
Match: gi|1009127738|ref|XP_015880853.1| (PREDICTED: U-box domain-containing protein 3-like [Ziziphus jujuba])

HSP 1 Score: 113.2 bits (282), Expect = 5.5e-22
Identity = 59/88 (67.05%), Postives = 68/88 (77.27%), Query Frame = -3


Query: 380 TCRETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSADLERIVY 439
           +CR+ YRE ILKEGAIPGLLRLTVEGT EAQE           SPQEK ++S+ LERIVY
Sbjct: 308 SCRDKYRELILKEGAIPGLLRLTVEGTAEAQERARTLLDLLRDSPQEKGLASSVLERIVY 367

Query: 440 KIAAEVDGIDQAAETAKRLMQEMVQRRL 499
            IAA VDG D+AAETAKRL+Q+MVQR +
Sbjct: 368 DIAARVDGADKAAETAKRLLQDMVQRSM 395

Query: 500  559
           
Sbjct: 428  395

Query: 560  619
           
Sbjct: 488  395

Query: 620  644
           
Sbjct: 548  395

[Close]

BLAST of MU57669 vs. NCBI nr
Match: gi|224129230|ref|XP_002320533.1| (armadillo/beta-catenin repeat family protein [Populus trichocarpa])

HSP 1 Score: 110.9 bits (276), Expect = 2.7e-21
Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = -3


Query: 380 TCRETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSADLERIVY 439
           +CRE YRE ILKEGAIPGLLRLTVEGT++AQ+           +PQEK +SS+ LERIVY
Sbjct: 270 SCREKYRELILKEGAIPGLLRLTVEGTSKAQDRARTLLDLLRDTPQEKRLSSSVLERIVY 329

Query: 440 KIAAEVDGIDQAAETAKRLMQEMVQRRL 499
            IA  VDG D+AAETAKRL+Q+MVQR +
Sbjct: 330 NIATRVDGSDKAAETAKRLLQDMVQRSM 357

Query: 500  559
           
Sbjct: 390  357

Query: 560  619
           
Sbjct: 450  357

Query: 620  644
           
Sbjct: 510  357

[Close]

BLAST of MU57669 vs. NCBI nr
Match: gi|743927800|ref|XP_011008083.1| (PREDICTED: U-box domain-containing protein 15 isoform X1 [Populus euphratica])

HSP 1 Score: 110.9 bits (276), Expect = 2.7e-21
Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = -3


Query: 380 TCRETYREPILKEGAIPGLLRLTVEGTTEAQEXXXXXXXXXXXSPQEKTMSSADLERIVY 439
           +CRE YRE ILKEGAIPGLLRLTVEGT++AQ+           +PQEK +SS+ LERIVY
Sbjct: 270 SCREKYRELILKEGAIPGLLRLTVEGTSKAQDRARTLLDLLRDTPQEKRLSSSVLERIVY 329

Query: 440 KIAAEVDGIDQAAETAKRLMQEMVQRRL 499
            IA  VDG D+AAETAKRL+Q+MVQR +
Sbjct: 330 NIATRVDGSDKAAETAKRLLQDMVQRSM 357

Query: 500  559
           
Sbjct: 390  357

Query: 560  619
           
Sbjct: 450  357

Query: 620  644
           
Sbjct: 510  357

The following BLAST results are available for this feature:

BLAST of MU57669 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFU6_CUCSA	3.7e-33	86.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G113530 PE=4 SV=1	[more]
B9IAV5_POPTR	2.5e-21	64.77	Armadillo/beta-catenin repeat family protein OS=Populus trichocarpa GN=POPTR_001...	[more]
V4W4T8_9ROSI	3.3e-21	64.77	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015636mg PE=4 SV=1	[more]
A0A067EIC5_CITSI	3.3e-21	64.77	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017249mg PE=4 SV=1	[more]
A0A067E7B6_CITSI	3.3e-21	64.77	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017249mg PE=4 SV=1	[more]

BLAST of MU57669 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12710.1	1.9e-17	50.00	ARM repeat superfamily protein	[more]
AT3G03440.1	1.5e-09	40.48	ARM repeat superfamily protein	[more]

BLAST of MU57669 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094568\|ref\|XP_008448133.1\|	8.2e-34	87.91	PREDICTED: U-box domain-containing protein 14 [Cucumis melo]	[more]
gi\|449444466\|ref\|XP_004139995.1\|	4.1e-33	86.81	PREDICTED: U-box domain-containing protein 45 [Cucumis sativus]	[more]
gi\|1009127738\|ref\|XP_015880853.1\|	5.5e-22	67.05	PREDICTED: U-box domain-containing protein 3-like [Ziziphus jujuba]	[more]
gi\|224129230\|ref\|XP_002320533.1\|	2.7e-21	64.77	armadillo/beta-catenin repeat family protein [Populus trichocarpa]	[more]
gi\|743927800\|ref\|XP_011008083.1\|	2.7e-21	64.77	PREDICTED: U-box domain-containing protein 15 isoform X1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C013456	MELO3C013456	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
BA16YM18RM1	BA16YM18RM1	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23315	BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING	coord: 3..87 score: 2.0
None	No IPR available	PANTHER	PTHR23315:SF88	ARM REPEAT PROTEIN	coord: 3..87 score: 2.0