MU56959 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU56959
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionWRKY transcription factor 6
Locationchr6 : 711430 .. 711869 (+)
Sequence length438
The following sequences are available for this feature:

transcribed_cluster sequence

TGGGATTGGAGCGGCTACGACGGCGGACTACAGAGGGTTCAGTCGTCGGAGCAATCGGCGGTGACAGAGATGATTTCGGCGATAACTTCAGTGACAAATTCGCCGATTTGCATTGGGGAGTGGGATTTCTCGCTTGACAATATTGATTTTGACCAGAATTTCCCCTTTGACTCTCTAGATTTCATCTCTTGATTTTTTTTTTCTGGTTATATTATCATTAACTTTTTTCCACGTAGGATTTGAGATGTTTTTGTTTCTTTAGATATTCTTCCATTGTGTAAGAATTATTTTGAGAAGTGTCTGTGGGGATTAATCTGTGTAGTTTAAAGTTTTATTGTCATTTAATGATCATCTAGTATTGTAGTTATTGAATTTTTTTCTTGTCTAAAGAAATGTAATGATCTTTAAGCTAATGAATAATATTTTTTCTAGTGATAA
Library categoryESTs
melon A library1
BLAST of MU56959 vs. TrEMBL
Match: A0A0A0L772_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119700 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-18
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 1

Query: 1   WDWSGYDGGLQRVQSSEQSAVTEMISAITSVTNSPICIGEWDFSLDNIDFDQN 60
           WDWSGYDGG+QRVQSSEQSAVTE++SA TSVTNSPI  G+WDFSLDNIDFD N
Sbjct: 275 WDWSGYDGGVQRVQSSEQSAVTEIVSATTSVTNSPIYNGDWDFSLDNIDFDHN 327

Query: 61  120
           
Sbjct: 335 327

Query: 121 160
           
Sbjct: 395 327

BLAST of MU56959 vs. NCBI nr
Match: gi|659075009|ref|XP_008437915.1| (PREDICTED: probable WRKY transcription factor 46 [Cucumis melo])

HSP 1 Score: 109.8 bits (273), Expect = 4.2e-21
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 1

Query: 1   WDWSGYDGGLQRVQSSEQSAVTEMISAITSVTNSPICIGEWDFSLDNIDFDQN 60
           WDWSGYDGGLQRVQSSEQSAVTE+ISA TSVTNSPICIGEWDFSLDNIDFDQN
Sbjct: 278 WDWSGYDGGLQRVQSSEQSAVTEIISATTSVTNSPICIGEWDFSLDNIDFDQN 330

Query: 61  120
           
Sbjct: 338 330

Query: 121 160
           
Sbjct: 398 330

BLAST of MU56959 vs. NCBI nr
Match: gi|778676947|ref|XP_011650695.1| (PREDICTED: probable WRKY transcription factor 46 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-17
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 1

Query: 1   WDWSGYDGGLQRVQSSEQSAVTEMISAITSVTNSPICIGEWDFSLDNIDFDQN 60
           WDWSGYDGG+QRVQSSEQSAVTE++SA TSVTNSPI  G+WDFSLDNIDFD N
Sbjct: 275 WDWSGYDGGVQRVQSSEQSAVTEIVSATTSVTNSPIYNGDWDFSLDNIDFDHN 327

Query: 61  120
           
Sbjct: 335 327

Query: 121 160
           
Sbjct: 395 327

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L772_CUCSA3.0e-1884.91Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659075009|ref|XP_008437915.1|4.2e-2196.23PREDICTED: probable WRKY transcription factor 46 [Cucumis melo][more]
gi|778676947|ref|XP_011650695.1|1.3e-1784.91PREDICTED: probable WRKY transcription factor 46 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C006038MELO3C006038gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
A39E07A39E07EST