MU56917 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU56917
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	EamA-like transporter family isoform 1
Location	chr2 : 15681088 .. 15682220 (-)
Sequence length	739

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Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GAACATGGCTCTCTTTTTCTGTTTAGTTTTACCTGTCGTGCAAGCTATTGAATAATGCCATGGTGCTATTACCGGATTATATGTAATAGTTTTCCAGCAATTTGGAACATACAAATTTATCTGTTACTATTCCTCTAAAATGTTAGTTCTGGGTCTATGTCTACCTGCACAGTGTTCTCTGTTGATGTTTTTGGCGTATGTGGGTTTAATAATATGCCAAAAGGTTGTTTATTTGTGGTGAAACTAGCTGGTGCACTAGGTAAAAAGGGGAGAAAGAGTTTCTCCATTTAGCAGTGCACTAATGGTTTTTATGTAAGAAGTATGAACCCCACAAATCATCTATTTAATCTGCCATAATCTTTCCAATTTGTTGATTGTGTGATGAATCGAGTGATGTTTAGGATAGTTAGAAGTCCATGTTTTCCATAAATGGAGAGTCTGGCATGATTATGAGGCATTGAAGGAAAAAGTGGAAGAGGATTGAAGGCAATTTATATGCAAAAAATAGCTCTGTCGGCAAAAGTTTTTCATTAATCAATTGTGATGAAAATGTGTTGGAGATACAAGCTTGGGTTGCTTCTCATTCTCAGTGTTGTGATCTTGTGGGTTTCCTCTGCTGAAGTTACCCAGAGTATTTTTGAAGATATTCAGCAACCATTTGCAATATCATATGTTACAACGTCACTTTGGATAGTTTATCTTCCAATAGCATTGCTTAAGGACTGGTTGCTAAGTTTTT

Library


Library category	ESTs
melon A library	1

Homology

[Close]

BLAST of MU56917 vs. TrEMBL
Match: A0A0A0LVW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G222870 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-23
Identity = 60/81 (74.07%), Postives = 61/81 (75.31%), Query Frame = 1


Query: 496 MQKIALSAKVFH*SIVMKMCWRYKXXXXXXXXXXXXXXXXAEVTQSIFEDIQQPFAISYV 555
           MQKIALS KVFH SIVMKMCWRYK                AEVTQSIF D +QPFAISYV
Sbjct: 1   MQKIALSVKVFHQSIVMKMCWRYKLGLLLILSVVIMWVSSAEVTQSIFADYEQPFAISYV 60

Query: 556 TTSLWIVYLPIALLKDWLLSF 615
           TTSLWIVYLPIALLKDWLLSF
Sbjct: 61  TTSLWIVYLPIALLKDWLLSF 81

Query: 616  675
           
Sbjct: 121  81

Query: 676  735
           
Sbjct: 181  81

Query: 736  739
           
Sbjct: 241  81

[Close]

BLAST of MU56917 vs. TrEMBL
Match: W9RJB0_9ROSA (Putative vacuolar membrane protein OS=Morus notabilis GN=L484_008510 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.4e-07
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 1


Query: 550 MCWRYKXXXXXXXXXXXXXXXXAEVTQSIFEDIQQPFAISYVTTSLWIVYLPIALLKDWL 609
           M W+YK                AEVTQ IF D +QPFA++Y+  SL +VYLPIA +KDWL
Sbjct: 1   MGWKYKAGLFLIAAVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWL 60

Query: 610 LSF 669
            +F
Sbjct: 61  CNF 63

Query: 670  729
           
Sbjct: 121  63

Query: 730  739
           
Sbjct: 181  63

[Close]

BLAST of MU56917 vs. TrEMBL
Match: D8R7X3_SELML (Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_144549 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-07
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 1


Query: 550 MCWRYKXXXXXXXXXXXXXXXXAEVTQSIFEDIQQPFAISYVTTSLWIVYLPIALLKDWL 609
           M W+YK                AEVTQ IFE  +QPFA+SY+  SL +VYLP+++LKDW+
Sbjct: 1   MAWKYKAGLVLLSTVVVIWVTSAEVTQKIFEAYKQPFALSYLGASLMVVYLPLSVLKDWI 60

Query: 610 LSF 669
            S+
Sbjct: 61  YSY 63

Query: 670  729
           
Sbjct: 121  63

Query: 730  739
           
Sbjct: 181  63

[Close]

BLAST of MU56917 vs. TrEMBL
Match: D8QR10_SELML (Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_75335 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-07
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 1


Query: 550 MCWRYKXXXXXXXXXXXXXXXXAEVTQSIFEDIQQPFAISYVTTSLWIVYLPIALLKDWL 609
           M W+YK                AEVTQ IFE  +QPFA+SY+  SL +VYLP+++LKDW+
Sbjct: 1   MAWKYKAGLVLLSTVVVIWVTSAEVTQKIFEAYKQPFALSYLGASLMVVYLPLSVLKDWI 60

Query: 610 LSF 669
            S+
Sbjct: 61  YSY 63

Query: 670  729
           
Sbjct: 121  63

Query: 730  739
           
Sbjct: 181  63

[Close]

BLAST of MU56917 vs. TrEMBL
Match: B9RP13_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0923270 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-07
Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 1


Query: 550 MCWRYKXXXXXXXXXXXXXXXXAEVTQSIFEDIQQPFAISYVTTSLWIVYLPIALLKDWL 609
           M WRYK                AEVTQ IF D +QPFA++Y+  SL +VYLPIA LKDW+
Sbjct: 1   MSWRYKAGLFLIAAVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIAFLKDWI 60

Query: 610  669
           
Sbjct: 61   60

Query: 670  729
           
Sbjct: 121  60

[Close]

BLAST of MU56917 vs. TAIR10
Match: AT4G32140.1 (AT4G32140.1 EamA-like transporter family)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-09
Identity = 30/63 (47.62%), Postives = 34/63 (53.97%), Query Frame = 1


Query: 550 MCWRYKXXXXXXXXXXXXXXXXAEVTQSIFEDIQQPFAISYVTTSLWIVYLPIALLKDWL 609
           M WRYK                AEVTQ IF   +QPFA++Y+  SL IVYLP+A LKDWL
Sbjct: 1   MGWRYKAGLFLIGTVVIIWVTSAEVTQDIFTAYKQPFAVTYLGASLMIVYLPVAFLKDWL 60

Query: 610 LSF 669
             +
Sbjct: 61  CRY 63

Query: 670  729
           
Sbjct: 121  63

Query: 730  739
           
Sbjct: 181  63

[Close]

BLAST of MU56917 vs. NCBI nr
Match: gi|449465593|ref|XP_004150512.1| (PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 1.3e-22
Identity = 60/81 (74.07%), Postives = 61/81 (75.31%), Query Frame = 1


Query: 496 MQKIALSAKVFH*SIVMKMCWRYKXXXXXXXXXXXXXXXXAEVTQSIFEDIQQPFAISYV 555
           MQKIALS KVFH SIVMKMCWRYK                AEVTQSIF D +QPFAISYV
Sbjct: 1   MQKIALSVKVFHQSIVMKMCWRYKLGLLLILSVVIMWVSSAEVTQSIFADYEQPFAISYV 60

Query: 556 TTSLWIVYLPIALLKDWLLSF 615
           TTSLWIVYLPIALLKDWLLSF
Sbjct: 61  TTSLWIVYLPIALLKDWLLSF 81

Query: 616  675
           
Sbjct: 121  81

Query: 676  735
           
Sbjct: 181  81

Query: 736  739
           
Sbjct: 241  81

[Close]

BLAST of MU56917 vs. NCBI nr
Match: gi|659086427|ref|XP_008443928.1| (PREDICTED: uncharacterized transporter C405.03c-like isoform X1 [Cucumis melo])

HSP 1 Score: 93.2 bits (230), Expect = 6.8e-16
Identity = 47/65 (72.31%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 544 MKMCWRYKXXXXXXXXXXXXXXXXAEVTQSIFEDIQQPFAISYVTTSLWIVYLPIALLKD 603
           MKMCWRYK                AEVTQSIFED +QPFAISYVTTSLWIVYLPIALLKD
Sbjct: 1   MKMCWRYKLGLLLILSVVILWVSSAEVTQSIFEDYEQPFAISYVTTSLWIVYLPIALLKD 60

Query: 604 WLLSF 663
           WLLSF
Sbjct: 61  WLLSF 65

Query: 664  723
           
Sbjct: 121  65

Query: 724  739
           
Sbjct: 181  65

[Close]

BLAST of MU56917 vs. NCBI nr
Match: gi|659086431|ref|XP_008443930.1| (PREDICTED: uncharacterized transporter C405.03c-like isoform X2 [Cucumis melo])

HSP 1 Score: 93.2 bits (230), Expect = 6.8e-16
Identity = 47/65 (72.31%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 544 MKMCWRYKXXXXXXXXXXXXXXXXAEVTQSIFEDIQQPFAISYVTTSLWIVYLPIALLKD 603
           MKMCWRYK                AEVTQSIFED +QPFAISYVTTSLWIVYLPIALLKD
Sbjct: 1   MKMCWRYKLGLLLILSVVILWVSSAEVTQSIFEDYEQPFAISYVTTSLWIVYLPIALLKD 60

Query: 604 WLLSF 663
           WLLSF
Sbjct: 61  WLLSF 65

Query: 664  723
           
Sbjct: 121  65

Query: 724  739
           
Sbjct: 181  65

[Close]

BLAST of MU56917 vs. NCBI nr
Match: gi|719981835|ref|XP_010250247.1| (PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Nelumbo nucifera])

HSP 1 Score: 62.0 bits (149), Expect = 1.7e-06
Identity = 31/62 (50.00%), Postives = 37/62 (59.68%), Query Frame = 1


Query: 550 MCWRYKXXXXXXXXXXXXXXXXAEVTQSIFEDIQQPFAISYVTTSLWIVYLPIALLKDWL 609
           M WRYK                AEVTQ IF D +QPFA++Y+  SL +VYLPIA +KDWL
Sbjct: 1   MGWRYKAGLMLIAAVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWL 60

Query: 610 LS 669
            S
Sbjct: 61  CS 62

Query: 670  729
           
Sbjct: 121  62

Query: 730  736
           
Sbjct: 181  62

[Close]

BLAST of MU56917 vs. NCBI nr
Match: gi|802626979|ref|XP_012076497.1| (PREDICTED: uncharacterized vacuolar membrane protein YML018C isoform X1 [Jatropha curcas])

HSP 1 Score: 61.6 bits (148), Expect = 2.2e-06
Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 1


Query: 550 MCWRYKXXXXXXXXXXXXXXXXAEVTQSIFEDIQQPFAISYVTTSLWIVYLPIALLKDWL 609
           M WRYK                AEVTQ IF D +QPFA++Y+  SL +VYLPIA LKDW+
Sbjct: 1   MSWRYKAGLFLISAVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIAFLKDWI 60

Query: 610  669
           
Sbjct: 61   60

Query: 670  729
           
Sbjct: 121  60

The following BLAST results are available for this feature:

BLAST of MU56917 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVW6_CUCSA	2.3e-23	74.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G222870 PE=4 SV=1	[more]
W9RJB0_9ROSA	2.4e-07	47.62	Putative vacuolar membrane protein OS=Morus notabilis GN=L484_008510 PE=4 SV=1	[more]
D8R7X3_SELML	3.1e-07	46.03	Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_144...	[more]
D8QR10_SELML	3.1e-07	46.03	Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_753...	[more]
B9RP13_RICCO	3.1e-07	50.00	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0923270 PE=4 SV=1	[more]

BLAST of MU56917 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32140.1	1.0e-09	47.62	EamA-like transporter family	[more]

BLAST of MU56917 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465593\|ref\|XP_004150512.1\|	1.3e-22	74.07	PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Cucumis sativ...	[more]
gi\|659086427\|ref\|XP_008443928.1\|	6.8e-16	72.31	PREDICTED: uncharacterized transporter C405.03c-like isoform X1 [Cucumis melo]	[more]
gi\|659086431\|ref\|XP_008443930.1\|	6.8e-16	72.31	PREDICTED: uncharacterized transporter C405.03c-like isoform X2 [Cucumis melo]	[more]
gi\|719981835\|ref\|XP_010250247.1\|	1.7e-06	50.00	PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Nelumbo nucif...	[more]
gi\|802626979\|ref\|XP_012076497.1\|	2.2e-06	50.00	PREDICTED: uncharacterized vacuolar membrane protein YML018C isoform X1 [Jatroph...	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C010293	MELO3C010293	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
A37C11	A37C11	EST