MU56837 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU56837
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUnknown protein
Locationchr6 : 5425876 .. 5426421 (-)
Sequence length545
The following sequences are available for this feature:

transcribed_cluster sequence

GTGTTTATTGGGATTTCTCGAAATTCAAAAACGGTCTATCTTTCGTTCAGACAATTTCAATCCGATCGTTCATCAATTTGTAAGTAAAAGCTCTGATTCATTTTTCAGTTCTTTAAATTCAATCTTTTCATCTGTATATCGTCTAAGAATAGGTTGGCTACTCTGTTTTTTTCGATTTTTGAGAACTAACAGAGTTGTATATAAGTACTCTAAACCCTAAATTTCTTCTCATTTTTAGCTGATTATTATTAGCTGAATCTAAAGAAGTTTGTTGTAAGCATGCATACTTGTAGTTCTCTGGGAATTTCTACCATCAAACCTTGTAGGATTCTTATTGGCTTCAAATCATCTTCGATGTTTGGAACAATCGCATCTCCCAAGCTAAAGTACAAGAGGATCGGTAGATTTTCGAAATTAGAGCCAAATAGGTGTAAAGTTATAGGGTCTGTACAGGTTGTCGATAAGTTAAGTAGGAGATGTTTTTGTTTTTCTAATGGTTATCGGTTGTATAAAGGTAGCAGTGATAGAAATAGGCATTTGATTGC
Library categoryESTs
melon A library1
BLAST of MU56837 vs. TrEMBL
Match: A0A0A0L968_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G168930 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-38
Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 1

Query: 280 MHTCSSLGISTIKPCRILIGFKSSSMFGTIASPKLKYKRIGRFSKLEPNRCKVIGSVQVV 339
           MHTCSSLGIST+KPCRILIGFKSSSMFGTIASPKLKYKRIGRFSKLEPN CK+ GSVQVV
Sbjct: 1   MHTCSSLGISTMKPCRILIGFKSSSMFGTIASPKLKYKRIGRFSKLEPNGCKITGSVQVV 60

Query: 340 DKLSRRCFCFSNGYRLYKGSSDRNRHLI 399
           D LSRRC CFSNGYRLYKGS+DRNR LI
Sbjct: 61  DNLSRRCICFSNGYRLYKGSNDRNRCLI 88

Query: 400 459
           
Sbjct: 121 88

Query: 460 519
           
Sbjct: 181 88

Query: 520 544
           
Sbjct: 241 88

BLAST of MU56837 vs. NCBI nr
Match: gi|659076988|ref|XP_008438972.1| (PREDICTED: alkaline/neutral invertase CINV2 [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 3.1e-42
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 1

Query: 280 MHTCSSLGISTIKPCRILIGFKSSSMFGTIASPKLKYKRIGRFSKLEPNRCKVIGSVQVV 339
           MHTCSSLGISTIKPCRILIGFKSSSMFGTIASPKLKYKRIGRFSKLEPN CKVIGSVQVV
Sbjct: 1   MHTCSSLGISTIKPCRILIGFKSSSMFGTIASPKLKYKRIGRFSKLEPNGCKVIGSVQVV 60

Query: 340 DKLSRRCFCFSNGYRLYKGSSDRNRHLI 399
           DKLSRRCFCFSNGYRLYKGSSDRNRHLI
Sbjct: 61  DKLSRRCFCFSNGYRLYKGSSDRNRHLI 88

Query: 400 459
           
Sbjct: 121 88

Query: 460 519
           
Sbjct: 181 88

Query: 520 544
           
Sbjct: 241 88

BLAST of MU56837 vs. NCBI nr
Match: gi|778679111|ref|XP_011651089.1| (PREDICTED: alkaline/neutral invertase A, mitochondrial [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 2.7e-38
Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 1

Query: 280 MHTCSSLGISTIKPCRILIGFKSSSMFGTIASPKLKYKRIGRFSKLEPNRCKVIGSVQVV 339
           MHTCSSLGIST+KPCRILIGFKSSSMFGTIASPKLKYKRIGRFSKLEPN CK+ GSVQVV
Sbjct: 1   MHTCSSLGISTMKPCRILIGFKSSSMFGTIASPKLKYKRIGRFSKLEPNGCKITGSVQVV 60

Query: 340 DKLSRRCFCFSNGYRLYKGSSDRNRHLI 399
           D LSRRC CFSNGYRLYKGS+DRNR LI
Sbjct: 61  DNLSRRCICFSNGYRLYKGSNDRNRCLI 88

Query: 400 459
           
Sbjct: 121 88

Query: 460 519
           
Sbjct: 181 88

Query: 520 544
           
Sbjct: 241 88

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L968_CUCSA2.5e-3890.91Uncharacterized protein OS=Cucumis sativus GN=Csa_3G168930 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659076988|ref|XP_008438972.1|3.1e-4298.86PREDICTED: alkaline/neutral invertase CINV2 [Cucumis melo][more]
gi|778679111|ref|XP_011651089.1|2.7e-3890.91PREDICTED: alkaline/neutral invertase A, mitochondrial [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C006727MELO3C006727gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
A33F07A33F07EST