MU56810 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU56810
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pentatricopeptide repeat-containing family protein
Location	chr12 : 14787547 .. 14788053 (+)
Sequence length	506

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TAGATTGCGTGATGCAGGAAATGTAAGGAAGATGATGAAAGAGAGTGGGGTAAAGAAAGAACCTGCCTGTAGTTGGGTTGAAATTGAGAATGAAGTCCACATGTTTGTGGCAAATGATGATTCACATCCAATGAGAGAAGAAATCCAGAGGATGTGGGAGAAAATAAGTGGGAAAATTAAAGAGATCGGGTATGTGCCAGACACAAGCCATGTGCTTTTCTTCATGGATCAGCAGGACAGAGAAGTAAAGCTACAATACCATAGCGAGAAGTTAGCATTAGCATTTGCAGTGTTGAAAACTCCTCCTGGGTTAACCATTAGGATTAAGAAGAACATTAGAATATGTGGTGATTGCCACTCTGCATTCAAGTTTGCTTCAAAAGTCTTGGGAAGAGAAATCATTGTAAGAGACACCAACAGGTTTCACCATTTCCTTCATGGCATGTGTTCTTGCAGGGACTATTGGTAGCTTATAAGTTGTTGAATACTAAAATCTGTCATTTTAT

Library


Library category	ESTs
melon A library	1

Homology

[Close]

BLAST of MU56810 vs. Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.0e-68
Identity = 118/155 (76.13%), Postives = 130/155 (83.87%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           R  DA  VRK MKESGVKKEPACSWVEIEN +HMFVAND+ HP REEI R WE++  KIK
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           E+GYVPDTSHV+  +DQQ+REV LQYHSEK+ALAFA+L TPPG TI IKKNIR+CGDCH+
Sbjct: 539 ELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHT 598

Query: 122 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           A K ASKV+GREIIVRDTNRFHHF  G CSC+DYW
Sbjct: 599 AIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633

Query: 182  241
           
Sbjct: 659  633

Query: 242  301
           
Sbjct: 719  633

Query: 302  361
           
Sbjct: 779  633

Query: 362  421
           
Sbjct: 839  633

Query: 422  467
           
Sbjct: 899  633

[Close]

BLAST of MU56810 vs. Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-45
Identity = 81/152 (53.29%), Postives = 111/152 (73.03%), Query Frame = 2


Query: 11  DAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIKEIG 70
           +A  +RK MK+  VKKE   SW+E++++VH+F   D +HP + EI    +KI  +IK++G
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 694

Query: 71  YVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFK 130
           YVPDT+ VL  ++++ +E  L++HSEKLA+AF ++ TP   T+RI KN+R+C DCH+A K
Sbjct: 695 YVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIK 754

Query: 131 FASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 190
           F SK++GREIIVRDT RFHHF  G CSCRDYW
Sbjct: 755 FISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786

Query: 191  250
           
Sbjct: 815  786

Query: 251  310
           
Sbjct: 875  786

Query: 311  370
           
Sbjct: 935  786

Query: 371  430
           
Sbjct: 995  786

Query: 431  467
           
Sbjct: 1055  786

[Close]

BLAST of MU56810 vs. Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 9.0e-44
Identity = 81/151 (53.64%), Postives = 105/151 (69.54%), Query Frame = 2


Query: 14  AGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIKEIGY 73
           A  VR+ MKE GV+KEP CSW+E  +EVH FVA D SHP  E++    E +  ++++ GY
Sbjct: 740 ATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 799

Query: 74  VPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKF 133
           VPDTS VL  +++ ++E+ L  HSEKLA+AF +L T PG  IR+ KN+R+C DCH A KF
Sbjct: 800 VPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKF 859

Query: 134 ASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 193
            SK++ REII+RD  RFH F +G CSC DYW
Sbjct: 860 ISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890

Query: 194  253
           
Sbjct: 920  890

Query: 254  313
           
Sbjct: 980  890

Query: 314  373
           
Sbjct: 1040  890

Query: 374  433
           
Sbjct: 1100  890

Query: 434  467
           
Sbjct: 1160  890

[Close]

BLAST of MU56810 vs. Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-42
Identity = 77/156 (49.36%), Postives = 108/156 (69.23%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVAND-DSHPMREEIQRMWEKISGKI 61
           R  D   +RK+MK   V+K P CSW E+EN+VH F     +SHP +E I ++ +++ G +
Sbjct: 550 RWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLL 609

Query: 62  KEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCH 121
           +E GY PD S+ L  +D++++   L+YHSE+LA+A+A+LK   G+ IR+ KN+R+C DCH
Sbjct: 610 REAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCH 669

Query: 122 SAFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           +A K  SKV  REII+RD NRFHHF +G CSC+DYW
Sbjct: 670 TAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705

Query: 182  241
           
Sbjct: 730  705

Query: 242  301
           
Sbjct: 790  705

Query: 302  361
           
Sbjct: 850  705

Query: 362  421
           
Sbjct: 910  705

Query: 422  467
           
Sbjct: 970  705

[Close]

BLAST of MU56810 vs. Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-42
Identity = 77/148 (52.03%), Postives = 100/148 (67.57%), Query Frame = 2


Query: 23  VRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIKEIGYVPD 82
           +R  M+  G+ K P CS+VE+E  VH FV  D+S    E I  M ++I  +++E GYV D
Sbjct: 426 IRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTD 485

Query: 83  TSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASK 142
           T  VL  ++++D+E+ L YHSEKLA+AF ++KT PG  +RI KN+RICGDCH   K  SK
Sbjct: 486 TKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISK 545

Query: 143 VLGREIIVRDTNRFHHFLHGMCSCRDYW 202
           +  REI+VRD NRFHHF  G CSCRD+W
Sbjct: 546 LFSREIVVRDCNRFHHFRDGSCSCRDFW 573

Query: 203  262
           
Sbjct: 606  573

Query: 263  322
           
Sbjct: 666  573

Query: 323  382
           
Sbjct: 726  573

Query: 383  442
           
Sbjct: 786  573

Query: 443  467
           
Sbjct: 846  573

[Close]

BLAST of MU56810 vs. TrEMBL
Match: A0A0A0LSV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G171070 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.5e-82
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           RL DA  VRKMMKESGVKKEPACSWVEIENEVH+FVANDDSHPMREEIQRMWEKISGKIK
Sbjct: 524 RLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIK 583

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           EIGYVPDTSHVLFFM+QQDRE+KLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS
Sbjct: 584 EIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 643

Query: 122 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           AFKFAS+VLGREIIVRDTNRFHHFLHGMCSCRDYW
Sbjct: 644 AFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678

Query: 182  241
           
Sbjct: 704  678

Query: 242  301
           
Sbjct: 764  678

Query: 302  361
           
Sbjct: 824  678

Query: 362  421
           
Sbjct: 884  678

Query: 422  467
           
Sbjct: 944  678

[Close]

BLAST of MU56810 vs. TrEMBL
Match: M5X1J8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023254mg PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.9e-70
Identity = 127/155 (81.94%), Postives = 138/155 (89.03%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           RL DA  VRK+MK+ GVKKEPACSWVEIEN VHMFVANDD+HP R EI +MWE ISGKIK
Sbjct: 409 RLSDAARVRKLMKDCGVKKEPACSWVEIENAVHMFVANDDAHPQRVEILQMWETISGKIK 468

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           +IGYVPDTSHVLFF+DQQ+REVKLQYHSEKLALAFA+L T PG TIRIKKNIR+CGDCHS
Sbjct: 469 DIGYVPDTSHVLFFVDQQEREVKLQYHSEKLALAFALLNTTPGSTIRIKKNIRVCGDCHS 528

Query: 122 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           A K+ SKV GREIIVRDTNRFHHF +G CSCRDYW
Sbjct: 529 AIKYVSKVEGREIIVRDTNRFHHFRNGSCSCRDYW 563

Query: 182  241
           
Sbjct: 589  563

Query: 242  301
           
Sbjct: 649  563

Query: 302  361
           
Sbjct: 709  563

Query: 362  421
           
Sbjct: 769  563

Query: 422  467
           
Sbjct: 829  563

[Close]

BLAST of MU56810 vs. TrEMBL
Match: W9RCJ9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017957 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-69
Identity = 125/155 (80.65%), Postives = 139/155 (89.68%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           R ++A  VRKMMKESGVKKEPACSWVEIEN VHMF+ANDD+HP  +EI+ MWEKISGKI+
Sbjct: 596 RWQEAAKVRKMMKESGVKKEPACSWVEIENAVHMFIANDDAHPQWQEIREMWEKISGKIR 655

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           EIGYVPDTSHVL F+DQQ+REVKLQYHSEKLALAFA+L TP G TIRIKKNIR+CGDCHS
Sbjct: 656 EIGYVPDTSHVLLFVDQQEREVKLQYHSEKLALAFALLNTPLGSTIRIKKNIRVCGDCHS 715

Query: 122 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           A K+ SKV+GREIIVRDTNRFHHF +G CSC DYW
Sbjct: 716 AIKYVSKVVGREIIVRDTNRFHHFHNGSCSCGDYW 750

Query: 182  241
           
Sbjct: 776  750

Query: 242  301
           
Sbjct: 836  750

Query: 302  361
           
Sbjct: 896  750

Query: 362  421
           
Sbjct: 956  750

Query: 422  467
           
Sbjct: 1016  750

[Close]

BLAST of MU56810 vs. TrEMBL
Match: A0A068U7R1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017680001 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.3e-69
Identity = 122/155 (78.71%), Postives = 140/155 (90.32%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           RLRDA NVRKMM +SGVKKEPACSW+EIEN VHMFVANDDSHP R E++RMWEKI+ KI+
Sbjct: 498 RLRDAANVRKMMNDSGVKKEPACSWLEIENNVHMFVANDDSHPQRNEVRRMWEKIADKIR 557

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           EIGYVPDTSHVL+++DQQ+REV+LQ HSEKLALAFA+L TP G TIRIKKNIR+CGDCH+
Sbjct: 558 EIGYVPDTSHVLWYVDQQEREVRLQCHSEKLALAFALLNTPHGSTIRIKKNIRVCGDCHT 617

Query: 122 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           AFKF S+++GREII+RDTNRFHHF  G CSC DYW
Sbjct: 618 AFKFVSQLVGREIILRDTNRFHHFRGGSCSCGDYW 652

Query: 182  241
           
Sbjct: 678  652

Query: 242  301
           
Sbjct: 738  652

Query: 302  361
           
Sbjct: 798  652

Query: 362  421
           
Sbjct: 858  652

Query: 422  467
           
Sbjct: 918  652

[Close]

BLAST of MU56810 vs. TrEMBL
Match: B9HBZ4_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0006s00330g PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 9.6e-69
Identity = 125/155 (80.65%), Postives = 135/155 (87.10%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           R  DA  VRKMMKESGVKKEPACSWVE+ENEVH+FVA+DD+HP R EI  MWE+IS KIK
Sbjct: 436 RWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIK 495

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           EIGYVPD+SHVL  MDQQ+RE KLQYHSEKLALAFA+L TPPG TIRIKKNIRICGDCHS
Sbjct: 496 EIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHS 555

Query: 122 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           AFKF SK++ REIIVRDTNRFHHF  G CSC DYW
Sbjct: 556 AFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590

Query: 182  241
           
Sbjct: 616  590

Query: 242  301
           
Sbjct: 676  590

Query: 302  361
           
Sbjct: 736  590

Query: 362  421
           
Sbjct: 796  590

Query: 422  467
           
Sbjct: 856  590

[Close]

BLAST of MU56810 vs. TAIR10
Match: AT3G24000.1 (AT3G24000.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 240.0 bits (611), Expect = 1.1e-63
Identity = 111/144 (77.08%), Postives = 122/144 (84.72%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           R  DA  VRK MKESGVKKEPACSWVEIEN +HMFVAND+ HP REEI R WE++  KIK
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           E+GYVPDTSHV+  +DQQ+REV LQYHSEK+ALAFA+L TPPG TI IKKNIR+CGDCH+
Sbjct: 539 ELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHT 598

Query: 122 AFKFASKVLGREIIVRDTNRFHHF 181
           A K ASKV+GREIIVRDTNRFHHF
Sbjct: 599 AIKLASKVVGREIIVRDTNRFHHF 622

Query: 182  241
           
Sbjct: 659  622

Query: 242  301
           
Sbjct: 719  622

Query: 302  361
           
Sbjct: 779  622

Query: 362  421
           
Sbjct: 839  622

Query: 422  434
           
Sbjct: 899  622

[Close]

BLAST of MU56810 vs. TAIR10
Match: AT2G22070.1 (AT2G22070.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-46
Identity = 81/152 (53.29%), Postives = 111/152 (73.03%), Query Frame = 2


Query: 11  DAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIKEIG 70
           +A  +RK MK+  VKKE   SW+E++++VH+F   D +HP + EI    +KI  +IK++G
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 694

Query: 71  YVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFK 130
           YVPDT+ VL  ++++ +E  L++HSEKLA+AF ++ TP   T+RI KN+R+C DCH+A K
Sbjct: 695 YVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIK 754

Query: 131 FASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 190
           F SK++GREIIVRDT RFHHF  G CSCRDYW
Sbjct: 755 FISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786

Query: 191  250
           
Sbjct: 815  786

Query: 251  310
           
Sbjct: 875  786

Query: 311  370
           
Sbjct: 935  786

Query: 371  430
           
Sbjct: 995  786

Query: 431  467
           
Sbjct: 1055  786

[Close]

BLAST of MU56810 vs. TAIR10
Match: AT3G57430.1 (AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 177.9 bits (450), Expect = 5.0e-45
Identity = 81/151 (53.64%), Postives = 105/151 (69.54%), Query Frame = 2


Query: 14  AGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIKEIGY 73
           A  VR+ MKE GV+KEP CSW+E  +EVH FVA D SHP  E++    E +  ++++ GY
Sbjct: 740 ATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 799

Query: 74  VPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKF 133
           VPDTS VL  +++ ++E+ L  HSEKLA+AF +L T PG  IR+ KN+R+C DCH A KF
Sbjct: 800 VPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKF 859

Query: 134 ASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 193
            SK++ REII+RD  RFH F +G CSC DYW
Sbjct: 860 ISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890

Query: 194  253
           
Sbjct: 920  890

Query: 254  313
           
Sbjct: 980  890

Query: 314  373
           
Sbjct: 1040  890

Query: 374  433
           
Sbjct: 1100  890

Query: 434  467
           
Sbjct: 1160  890

[Close]

BLAST of MU56810 vs. TAIR10
Match: AT1G09410.1 (AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 173.7 bits (439), Expect = 9.5e-44
Identity = 77/156 (49.36%), Postives = 108/156 (69.23%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVAND-DSHPMREEIQRMWEKISGKI 61
           R  D   +RK+MK   V+K P CSW E+EN+VH F     +SHP +E I ++ +++ G +
Sbjct: 550 RWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLL 609

Query: 62  KEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCH 121
           +E GY PD S+ L  +D++++   L+YHSE+LA+A+A+LK   G+ IR+ KN+R+C DCH
Sbjct: 610 REAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCH 669

Query: 122 SAFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           +A K  SKV  REII+RD NRFHHF +G CSC+DYW
Sbjct: 670 TAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705

Query: 182  241
           
Sbjct: 730  705

Query: 242  301
           
Sbjct: 790  705

Query: 302  361
           
Sbjct: 850  705

Query: 362  421
           
Sbjct: 910  705

Query: 422  467
           
Sbjct: 970  705

[Close]

BLAST of MU56810 vs. TAIR10
Match: AT3G62890.1 (AT3G62890.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.2e-43
Identity = 77/148 (52.03%), Postives = 100/148 (67.57%), Query Frame = 2


Query: 23  VRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIKEIGYVPD 82
           +R  M+  G+ K P CS+VE+E  VH FV  D+S    E I  M ++I  +++E GYV D
Sbjct: 426 IRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTD 485

Query: 83  TSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASK 142
           T  VL  ++++D+E+ L YHSEKLA+AF ++KT PG  +RI KN+RICGDCH   K  SK
Sbjct: 486 TKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISK 545

Query: 143 VLGREIIVRDTNRFHHFLHGMCSCRDYW 202
           +  REI+VRD NRFHHF  G CSCRD+W
Sbjct: 546 LFSREIVVRDCNRFHHFRDGSCSCRDFW 573

Query: 203  262
           
Sbjct: 606  573

Query: 263  322
           
Sbjct: 666  573

Query: 323  382
           
Sbjct: 726  573

Query: 383  442
           
Sbjct: 786  573

Query: 443  467
           
Sbjct: 846  573

[Close]

BLAST of MU56810 vs. NCBI nr
Match: gi|659128608|ref|XP_008464284.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 330.5 bits (846), Expect = 1.7e-87
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK
Sbjct: 526 RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 585

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS
Sbjct: 586 EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 645

Query: 122 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW
Sbjct: 646 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 680

Query: 182  241
           
Sbjct: 706  680

Query: 242  301
           
Sbjct: 766  680

Query: 302  361
           
Sbjct: 826  680

Query: 362  421
           
Sbjct: 886  680

Query: 422  467
           
Sbjct: 946  680

[Close]

BLAST of MU56810 vs. NCBI nr
Match: gi|659128610|ref|XP_008464285.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 330.5 bits (846), Expect = 1.7e-87
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK
Sbjct: 490 RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 549

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS
Sbjct: 550 EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 609

Query: 122 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW
Sbjct: 610 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 644

Query: 182  241
           
Sbjct: 670  644

Query: 242  301
           
Sbjct: 730  644

Query: 302  361
           
Sbjct: 790  644

Query: 362  421
           
Sbjct: 850  644

Query: 422  467
           
Sbjct: 910  644

[Close]

BLAST of MU56810 vs. NCBI nr
Match: gi|449443492|ref|XP_004139511.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           RL DA  VRKMMKESGVKKEPACSWVEIENEVH+FVANDDSHPMREEIQRMWEKISGKIK
Sbjct: 524 RLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIK 583

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           EIGYVPDTSHVLFFM+QQDRE+KLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS
Sbjct: 584 EIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 643

Query: 122 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           AFKFAS+VLGREIIVRDTNRFHHFLHGMCSCRDYW
Sbjct: 644 AFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678

Query: 182  241
           
Sbjct: 704  678

Query: 242  301
           
Sbjct: 764  678

Query: 302  361
           
Sbjct: 824  678

Query: 362  421
           
Sbjct: 884  678

Query: 422  467
           
Sbjct: 944  678

[Close]

BLAST of MU56810 vs. NCBI nr
Match: gi|645236270|ref|XP_008224655.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Prunus mume])

HSP 1 Score: 276.9 bits (707), Expect = 2.3e-71
Identity = 128/155 (82.58%), Postives = 137/155 (88.39%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           RL DA  VRK+MK+ GVKKEPACSWVEIEN VHMFVANDD+HP R EI +MWE ISGKIK
Sbjct: 514 RLSDAARVRKLMKDCGVKKEPACSWVEIENAVHMFVANDDAHPQRVEILQMWETISGKIK 573

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           EIGYVPDTSHVLFF+DQQ+REVKLQYHSEKLALAFA+L T PG TIRIKKNIR+CGDCHS
Sbjct: 574 EIGYVPDTSHVLFFVDQQEREVKLQYHSEKLALAFALLNTTPGSTIRIKKNIRVCGDCHS 633

Query: 122 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           A K+ SKV GREIIVRDTNRFHHF  G CSCRDYW
Sbjct: 634 AIKYVSKVEGREIIVRDTNRFHHFRDGSCSCRDYW 668

Query: 182  241
           
Sbjct: 694  668

Query: 242  301
           
Sbjct: 754  668

Query: 302  361
           
Sbjct: 814  668

Query: 362  421
           
Sbjct: 874  668

Query: 422  467
           
Sbjct: 934  668

[Close]

BLAST of MU56810 vs. NCBI nr
Match: gi|595908225|ref|XP_007214219.1| (hypothetical protein PRUPE_ppa023254mg [Prunus persica])

HSP 1 Score: 276.6 bits (706), Expect = 3.0e-71
Identity = 127/155 (81.94%), Postives = 138/155 (89.03%), Query Frame = 2


Query: 2   RLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIK 61
           RL DA  VRK+MK+ GVKKEPACSWVEIEN VHMFVANDD+HP R EI +MWE ISGKIK
Sbjct: 409 RLSDAARVRKLMKDCGVKKEPACSWVEIENAVHMFVANDDAHPQRVEILQMWETISGKIK 468

Query: 62  EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 121
           +IGYVPDTSHVLFF+DQQ+REVKLQYHSEKLALAFA+L T PG TIRIKKNIR+CGDCHS
Sbjct: 469 DIGYVPDTSHVLFFVDQQEREVKLQYHSEKLALAFALLNTTPGSTIRIKKNIRVCGDCHS 528

Query: 122 AFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 181
           A K+ SKV GREIIVRDTNRFHHF +G CSCRDYW
Sbjct: 529 AIKYVSKVEGREIIVRDTNRFHHFRNGSCSCRDYW 563

Query: 182  241
           
Sbjct: 589  563

Query: 242  301
           
Sbjct: 649  563

Query: 302  361
           
Sbjct: 709  563

Query: 362  421
           
Sbjct: 769  563

Query: 422  467
           
Sbjct: 829  563

The following BLAST results are available for this feature:

BLAST of MU56810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP252_ARATH	4.0e-68	76.13	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]
PP168_ARATH	2.1e-45	53.29	Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN...	[more]
PP285_ARATH	9.0e-44	53.64	Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop...	[more]
PPR25_ARATH	1.7e-42	49.36	Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN...	[more]
PP295_ARATH	2.2e-42	52.03	Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN...	[more]

BLAST of MU56810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSV8_CUCSA	1.5e-82	95.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G171070 PE=4 SV=1	[more]
M5X1J8_PRUPE	3.9e-70	81.94	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023254mg PE=4 SV=1	[more]
W9RCJ9_9ROSA	1.9e-69	80.65	Uncharacterized protein OS=Morus notabilis GN=L484_017957 PE=4 SV=1	[more]
A0A068U7R1_COFCA	7.3e-69	78.71	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017680001 PE=4 SV=1	[more]
B9HBZ4_POPTR	9.6e-69	80.65	Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP...	[more]

BLAST of MU56810 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24000.1	1.1e-63	77.08	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G22070.1	1.2e-46	53.29	pentatricopeptide (PPR) repeat-containing protein	[more]
AT3G57430.1	5.0e-45	53.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G09410.1	9.5e-44	49.36	pentatricopeptide (PPR) repeat-containing protein	[more]
AT3G62890.1	1.2e-43	52.03	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of MU56810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128608\|ref\|XP_008464284.1\|	1.7e-87	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial ...	[more]
gi\|659128610\|ref\|XP_008464285.1\|	1.7e-87	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial ...	[more]
gi\|449443492\|ref\|XP_004139511.1\|	1.2e-83	95.48	PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-...	[more]
gi\|645236270\|ref\|XP_008224655.1\|	2.3e-71	82.58	PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-...	[more]
gi\|595908225\|ref\|XP_007214219.1\|	3.0e-71	81.94	hypothetical protein PRUPE_ppa023254mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C026082	MELO3C026082	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
A32D05	A32D05	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 2..27 score: 1.1
None	No IPR available	PANTHER	PTHR24015:SF897	SUBFAMILY NOT NAMED	coord: 2..27 score: 1.1