MU56130 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU56130
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	MICAL C-terminal-like protein, putative
Location	chr8 : 28670055 .. 28683178 (+)
Sequence length	450

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GGCATCTTCATTTCGAAGTTGGAGCTTTCGCAACAATGGCGGAACCACATGGTGGAGGCAACCACGATCTCGAGCAGACCTTGAAGCCCTTCTTTCAAAGAGCTTCTCAAGCCGAGAAGCTGCTCTCTTGAGTAAGAAAGATGACCATAACGAAGAACATCTCAAAACGATAAGTGAACTCCAGACAAAGCTAGACAGCGCAAACAATGCACTAATCGAAGAACGGAAAAAGGCTGAGATGGTTGCTGAAGAAAATGCTAAGCTTCAGTATCGCATAATTCATCTTGTGAGGACAGCTAGGGAAACCCATTAAAAGTTGGAGCTTGAATCACGTTTTTTTTTCTAGTTAAGAGAATTGGATAGTTTAAAATTTTATACTCTTTTATAATTTCCTTTACAGACCTTTGGAAAATTGAAATTGCAAAAATGTGAATTGAATTTTTGATGTCC

Library


Library category	ESTs
melon 46d library	1

Homology

[Close]

BLAST of MU56130 vs. TrEMBL
Match: C6T3Q4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G107400 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-12
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 2


Query: 107 SSREAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIHL 166
           S  EAAL SKK   NEE+LK I++LQ+KL+ AN  LI E++KA+M+  ENAKLQYRIIHL
Sbjct: 29  SRLEAALNSKKGTGNEENLKVINDLQSKLEVANVELISEKEKAQMLVAENAKLQYRIIHL 88

Query: 167 VRTARETH*KLE 226
           +R  +E   KLE
Sbjct: 89  LRALKEADLKLE 100

Query: 227  286
           
Sbjct: 149  100

Query: 287  323
           
Sbjct: 209  100

[Close]

BLAST of MU56130 vs. TrEMBL
Match: C6T3Q4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G107400 PE=2 SV=1)

HSP 1 Score: 33.5 bits (75), Expect = 2.7e+02
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 3


Query: 66  DLEQTLKPFFQRASQAEKLLS 125
           D E TLKPF+QRAS+AE+ LS
Sbjct: 9   DFELTLKPFYQRASEAEERLS 29

Query: 126  129
           
Sbjct: 69   29

HSP 2 Score: 80.5 bits (197), Expect = 1.9e-12
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 2


Query: 107 SSREAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIHL 166
           S  EAAL SKK   NEE+LK I++LQ+KL+ AN  LI E++KA+M+  ENAKLQYRIIHL
Sbjct: 29  SRLEAALNSKKGTGNEENLKVINDLQSKLEVANVELISEKEKAQMLVAENAKLQYRIIHL 88

Query: 167 VRTARETH*KLE 226
           +R  +E   KLE
Sbjct: 89  LRALKEADLKLE 100

Query: 227  286
           
Sbjct: 149  100

Query: 287  323
           
Sbjct: 209  100

[Close]

BLAST of MU56130 vs. TrEMBL
Match: A0A0B2S9Y2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_048169 PE=4 SV=1)

HSP 1 Score: 33.5 bits (75), Expect = 2.7e+02
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 3


Query: 66  DLEQTLKPFFQRASQAEKLLS 125
           D E TLKPF+QRAS+AE+ LS
Sbjct: 9   DFELTLKPFYQRASEAEERLS 29

Query: 126  129
           
Sbjct: 69   29

HSP 2 Score: 79.7 bits (195), Expect = 3.3e-12
Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 2


Query: 107 SSREAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIHL 166
           S  EA++ S +D  +EEHLKTISELQ KL+ AN  L  ER+KA+ +A EN KLQYR+IHL
Sbjct: 29  SRLEASVASNRDAGSEEHLKTISELQAKLEGANAELASEREKAKKLAVENGKLQYRVIHL 88

Query: 167 VRTARETH*KLE 226
           V+  RE   KLE
Sbjct: 89  VQAIREGDAKLE 100

Query: 227  286
           
Sbjct: 149  100

Query: 287  323
           
Sbjct: 209  100

[Close]

BLAST of MU56130 vs. TrEMBL
Match: B9H9I5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s04540g PE=4 SV=1)

HSP 1 Score: 30.4 bits (67), Expect = 2.3e+03
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3


Query: 66  DLEQTLKPFFQRASQAEKLLS 125
           +LE  LKPF+QRAS+AE  LS
Sbjct: 9   NLEGVLKPFYQRASEAEDRLS 29

Query: 126  129
           
Sbjct: 69   29

HSP 2 Score: 79.7 bits (195), Expect = 3.3e-12
Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 2


Query: 107 SSREAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIHL 166
           S  EA++ S +D  +EEHLKTISELQ KL+ AN  L  ER+KA+ +A EN KLQYR+IHL
Sbjct: 29  SRLEASVASNRDAGSEEHLKTISELQAKLEGANAELASEREKAKKLAVENGKLQYRVIHL 88

Query: 167 VRTARETH*KLE 226
           V+  RE   KLE
Sbjct: 89  VQAIREGDAKLE 100

Query: 227  286
           
Sbjct: 149  100

Query: 287  323
           
Sbjct: 209  100

[Close]

BLAST of MU56130 vs. TrEMBL
Match: A9PB69_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s04540g PE=2 SV=1)

HSP 1 Score: 30.4 bits (67), Expect = 2.3e+03
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3


Query: 66  DLEQTLKPFFQRASQAEKLLS 125
           +LE  LKPF+QRAS+AE  LS
Sbjct: 9   NLEGVLKPFYQRASEAEDRLS 29

Query: 126  129
           
Sbjct: 69   29

HSP 2 Score: 77.8 bits (190), Expect = 1.2e-11
Identity = 42/72 (58.33%), Postives = 49/72 (68.06%), Query Frame = 2


Query: 107 SSREAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIHL 166
           S  E AL SKKD  NEE  KTISELQ+KL+ AN  LI E++K   +A ENAKLQYR++HL
Sbjct: 32  SRLEVALASKKDAENEELWKTISELQSKLEDANTELISEQEKVRKLAAENAKLQYRVLHL 91

Query: 167 VRTARETH*KLE 226
           VR   E   K E
Sbjct: 92  VRALHECDAKPE 103

Query: 227  286
           
Sbjct: 152  103

Query: 287  323
           
Sbjct: 212  103

[Close]

BLAST of MU56130 vs. TAIR10
Match: AT3G57320.1 (AT3G57320.1 unknown protein)

HSP 1 Score: 50.8 bits (120), Expect = 8.3e-07
Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 2


Query: 116 EAALLSKKDDHNEEHL-KTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIHLVR 175
           EAAL S K D  +  L +   +LQ+KL+ AN  + +E+ K + +  ENAK +YRI+HLVR
Sbjct: 29  EAALASTKTDIPDAKLVEENKQLQSKLEEANATVKQEQTKVKDLTIENAKHKYRILHLVR 88

Query: 176 TARETH*KLELESR 235
             ++   KLE  S+
Sbjct: 89  ALKDADQKLERLSK 102

Query: 236  295
           
Sbjct: 149  102

Query: 296  335
           
Sbjct: 209  102

[Close]

BLAST of MU56130 vs. NCBI nr
Match: gi|659129281|ref|XP_008464609.1| (PREDICTED: uncharacterized protein LOC103502450 isoform X2 [Cucumis melo])

HSP 1 Score: 123.6 bits (309), Expect = 2.8e-25
Identity = 66/68 (97.06%), Postives = 66/68 (97.06%), Query Frame = 2


Query: 107 SSREAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIHL 166
           S  EAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIHL
Sbjct: 31  SRLEAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIHL 90

Query: 167 VRTARETH 226
           VRTARETH
Sbjct: 91  VRTARETH 98

Query: 227  286
           
Sbjct: 151  98

Query: 287  311
           
Sbjct: 211  98

[Close]

BLAST of MU56130 vs. NCBI nr
Match: gi|659129279|ref|XP_008464608.1| (PREDICTED: uncharacterized protein LOC103502450 isoform X1 [Cucumis melo])

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-11
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 2


Query: 107 SSREAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMV 166
           S  EAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKA ++
Sbjct: 31  SRLEAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKASII 76

Query: 167  226
           
Sbjct: 91   76

Query: 227  245
           
Sbjct: 151  76

[Close]

BLAST of MU56130 vs. NCBI nr
Match: gi|802730498|ref|XP_012086216.1| (PREDICTED: uncharacterized protein LOC105645264 isoform X1 [Jatropha curcas])

HSP 1 Score: 76.6 bits (187), Expect = 4.0e-11
Identity = 46/88 (52.27%), Postives = 55/88 (62.50%), Query Frame = 2


Query: 59  QPRSRADLEALLSKSFSSREAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAE 118
           Q  S A+   +L    S  E AL SKKD  NEE  KTISELQ+KL+ AN  LI E++K  
Sbjct: 22  QRASEAEHLVILKDRLSRLEVALASKKDAENEELWKTISELQSKLEDANTELISEQEKVR 81

Query: 119 MVAEENAKLQYRIIHLVRTARETH*KLE 178
            +A ENAKLQYR++HLVR   E   K E
Sbjct: 82  KLAAENAKLQYRVLHLVRALHECDAKPE 109

Query: 179  238
           
Sbjct: 142  109

Query: 239  298
           
Sbjct: 202  109

Query: 299  323
           
Sbjct: 262  109

[Close]

BLAST of MU56130 vs. NCBI nr
Match: gi|1021480783|ref|XP_016183537.1| (PREDICTED: uncharacterized protein LOC107625423 [Arachis ipaensis])

HSP 1 Score: 76.3 bits (186), Expect = 5.2e-11
Identity = 44/85 (51.76%), Postives = 61/85 (71.76%), Query Frame = 2


Query: 116 EAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIHLVRT 175
           EA+L ++KD  NEEHLKTI++LQ+KL+ +N  LI E++KA+ +A EN KLQYRIIHL+R 
Sbjct: 32  EASLNARKDAGNEEHLKTINDLQSKLEVSNAELISEKEKAQKLAAENEKLQYRIIHLLRA 91

Query: 176 ARETH*KLELESRFFF*LRELDSLK 235
            ++   KLE  S       +L+SLK
Sbjct: 92  LKDNDQKLEQVSA----REQLESLK 112

Query: 236  295
           
Sbjct: 152  112

Query: 296  355
           
Sbjct: 212  112

Query: 356  371
           
Sbjct: 272  112

[Close]

BLAST of MU56130 vs. NCBI nr
Match: gi|1012019867|ref|XP_015949674.1| (PREDICTED: uncharacterized protein LOC107474568 [Arachis duranensis])

HSP 1 Score: 75.9 bits (185), Expect = 6.8e-11
Identity = 44/85 (51.76%), Postives = 61/85 (71.76%), Query Frame = 2


Query: 116 EAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIHLVRT 175
           EA+L ++KD  NEEHLKTI++LQ+KL+ +N  LI E++KA+ +A EN KLQYRIIHL+R 
Sbjct: 32  EASLNARKDAGNEEHLKTINDLQSKLEVSNADLISEKEKAQKLAAENEKLQYRIIHLLRA 91

Query: 176 ARETH*KLELESRFFF*LRELDSLK 235
            ++   KLE  S       +L+SLK
Sbjct: 92  LKDNDQKLEQVSA----REQLESLK 112

Query: 236  295
           
Sbjct: 152  112

Query: 296  355
           
Sbjct: 212  112

Query: 356  371
           
Sbjct: 272  112

The following BLAST results are available for this feature:

BLAST of MU56130 vs. TrEMBL


Match Name	E-value	Identity	Description
C6T3Q4_SOYBN	1.9e-12	59.72	Uncharacterized protein OS=Glycine max GN=GLYMA_10G107400 PE=2 SV=1	[more]
C6T3Q4_SOYBN	2.7e+02	71.43	Uncharacterized protein OS=Glycine max GN=GLYMA_10G107400 PE=2 SV=1	[more]
A0A0B2S9Y2_GLYSO	2.7e+02	71.43	Uncharacterized protein OS=Glycine soja GN=glysoja_048169 PE=4 SV=1	[more]
B9H9I5_POPTR	2.3e+03	66.67	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s04540g PE=4 SV=1	[more]
A9PB69_POPTR	2.3e+03	66.67	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s04540g PE=2 SV=1	[more]

BLAST of MU56130 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57320.1	8.3e-07	41.89	unknown protein	[more]

BLAST of MU56130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129281\|ref\|XP_008464609.1\|	2.8e-25	97.06	PREDICTED: uncharacterized protein LOC103502450 isoform X2 [Cucumis melo]	[more]
gi\|659129279\|ref\|XP_008464608.1\|	2.3e-11	89.13	PREDICTED: uncharacterized protein LOC103502450 isoform X1 [Cucumis melo]	[more]
gi\|802730498\|ref\|XP_012086216.1\|	4.0e-11	52.27	PREDICTED: uncharacterized protein LOC105645264 isoform X1 [Jatropha curcas]	[more]
gi\|1021480783\|ref\|XP_016183537.1\|	5.2e-11	51.76	PREDICTED: uncharacterized protein LOC107625423 [Arachis ipaensis]	[more]
gi\|1012019867\|ref\|XP_015949674.1\|	6.8e-11	51.76	PREDICTED: uncharacterized protein LOC107474568 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C026338	MELO3C026338	gene
MELO3C026339	MELO3C026339	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
46D35A02	46D35A02	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 39..73 scor
None	No IPR available	PANTHER	PTHR38377	FAMILY NOT NAMED	coord: 28..91 score: 2.8