MU56120 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU56120
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCysteine proteinase inhibitor
Locationchr2 : 3273579 .. 3274332 (-)
Sequence length753
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

AAATCCATCAATCAATCTATCCATCAATCTCTCTCTGATTTTGAACTGAAGAGATCGTAATGGCGACTGTTGGAGGTATTAAGGATGTTCCTTCAAACGAGAACAGCATCGAGATGGATGAACTTGCTCGTTTTGCTGTTGCCGAACACAACAAGAAAGAGGTTTGGTTTTCCTTTTCCTATTTCATTTCGTTATTTCTTAATTGGGTTCTGTTTCGTTTTTTGTTCTGTCCCTAATTTTCTTTGGTTTCTGCGTTTATTTACCCTTCCATTTTTGTGCTCTTGCCTATATTCGTTTTGATTGTGGATACTGGATGATCATTTTCTTCAATTTATAACGAAGTTTTCTGTATTACTTCTCAAATGAACAGGAAGAATAATGGGTTGGATAGAGATTGGGATTTAAGTCTTGTAATTTTACTTTCCCATGATAATTCTTTTTTGTATAAATTGCATGGGATTAATTAGAAAAAAATCTCGATGTCTTCTAGATCCAATCCTTGGGTTAGGGAAAAGTTATGTGATTTGGATTGCGCACCAATTCGATAGAACAACTACATTATAGTTAAACCTGTGGAGATTGTGGCACCAATTCGATGGAACAACTACATTATAGTTAAACCATCGGAGATTGGTGCAATGATAAAATGGTTGAGTTCTATAAAGGGATAATAAGTAACAAGTTTTATCTACGGTGGCCATCTATCTAATATTTAATATCCTACAAGTTTTCTAAAATAGAATTAAGCAAGTT
Library
Library categoryESTs
melon 46d library1
Homology
[Close]
BLAST of MU56120 vs. Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 8.4e-06
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 3 

Query: 60  MATVGGIKDVPSNENSIEMDELARFAVAEHNKKE 119
           MA VGG+ DVP+N+NS E++ LARFAV EHNKKE
Sbjct: 34  MALVGGVGDVPANQNSGEVESLARFAVDEHNKKE 67

Query: 120  162
           
Sbjct: 94   67

[Close]
BLAST of MU56120 vs. TAIR10
Match: AT3G12490.2 (AT3G12490.2 cystatin B)

HSP 1 Score: 52.4 bits (124), Expect = 4.8e-07
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 3 

Query: 60  MATVGGIKDVPSNENSIEMDELARFAVAEHNKKE 119
           MA VGG+ DVP+N+NS E++ LARFAV EHNKKE
Sbjct: 34  MALVGGVGDVPANQNSGEVESLARFAVDEHNKKE 67

Query: 120  162
           
Sbjct: 94   67

[Close]
BLAST of MU56120 vs. NCBI nr
Match: gi|659100343|ref|XP_008451048.1| (PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-09
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 3 

Query: 60  MATVGGIKDVPSNENSIEMDELARFAVAEHNKKE 119
           MATVGGIKDVPSNENSIEMDELARFAVAEHNKKE
Sbjct: 1   MATVGGIKDVPSNENSIEMDELARFAVAEHNKKE 34

Query: 120  162
           
Sbjct: 61   34

[Close]
BLAST of MU56120 vs. NCBI nr
Match: gi|449452723|ref|XP_004144108.1| (PREDICTED: cysteine proteinase inhibitor A [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 9.0e-08
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 3 

Query: 60  MATVGGIKDVPSNENSIEMDELARFAVAEHNKKE 119
           MATVGGIK+VPSNENSIE+DELARFAV EHNKKE
Sbjct: 1   MATVGGIKEVPSNENSIEVDELARFAVDEHNKKE 34

Query: 120  162
           
Sbjct: 61   34

The following BLAST results are available for this feature:
BLAST of MU56120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CYT6_ARATH8.4e-0670.59Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2[more]
BLAST of MU56120 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12490.24.8e-0770.59 cystatin B[more]
BLAST of MU56120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100343|ref|XP_008451048.1|2.1e-09100.00PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo][more]
gi|449452723|ref|XP_004144108.1|9.0e-0891.18PREDICTED: cysteine proteinase inhibitor A [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C015607MELO3C015607gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
46D34E0446D34E04EST


InterPro
Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 4..34
score: 6.
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 5..34
score: 3.