MU56116 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU56116
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionStigma/style cell cycle inhibitor
Locationchr1 : 19942931 .. 19945408 (-)
Sequence length647
The following sequences are available for this feature:

transcribed_cluster sequence

ATAATAAAAAAACATTTTCTTAAAAAACCCTTCCCGTCTGTTAACCGGAATGTTACGGCGGTCACCGACTGCCTGAATCGGTCATCGAAACTTGAATCACCTAATTTCACGACCTTCGTTCAATTTTGCTATGGGCGGAAGCGAAAGAAAATCCAAGGAGAAAAGGAAGCATAGAAAATCGGCTTCATCTTCTGAAGGTTACTCATATCTGTTCCTCTCTCGTCTATGCACCTCCCCTCCTCTCTTTTAATCTGGTTTTTACTCAACTATTTTCAAGAATTTCTACCAAATAGAAGCAGTGCTTCTAGAGAAATTTACATTTTTTCTTTTCTTGGAGTGTATTCTTCATTAATCTATGGTGGATTGCACTGTGTGCTGTGTTTATGATATTGTTTGTAAAAATTCAGACGAGAAGAGAAGCAAGAGACCAAGAACTGCAGAAGATGAGGAAAGGGAAAGCAGAAGGAGTGATAAGAGAGAGAAGCGCAAGGAGAAGAAATCTCACAAGCACTCTAAAAGCCATTCAGAGAACCAAAATTCAAGAACTGTCCAAGGAAGATTATTTCTCAAAGAATAATGAGCTTGCTACCTGGTTGAAAGATGTGAAGAATGTGTATTTTTCTGATCTTTCTTCAGAATCTGCTCGC
Library categoryESTs
melon 46d library1
BLAST of MU56116 vs. TrEMBL
Match: A0A0A0K434_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G238960 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.5e-13
Identity = 48/91 (52.75%), Postives = 55/91 (60.44%), Query Frame = 3

Query: 414 REARDQELQKMRKGKAEGVIRERSARRRNLTSTLKA-------------IQRTKIQELSK 473
           R A D+E +  R  K E    ++S +     S  K+             + R KIQELSK
Sbjct: 31  RAAEDEERESRRSDKREKRKEKKSHKHSKRHSEKKSKDLHKGKHHKGDHLSRAKIQELSK 90

Query: 474 EDYFSKNNELATWLKDVKNVYFSDLSSESAR 533
           EDYFSKNNE ATWLKDVKNVYFSDLSSESAR
Sbjct: 91  EDYFSKNNEFATWLKDVKNVYFSDLSSESAR 121

Query: 534 593
           
Sbjct: 151 121

Query: 594 648
           
Sbjct: 211 121

BLAST of MU56116 vs. TrEMBL
Match: F8QMT0_TOBAC (Stigma/style cell cycle inhibitor OS=Nicotiana tabacum GN=SCI1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.6e-10
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 3

Query: 405 QTRREARDQELQKMRKGKAEGVIRERSARRRNLTSTL-KAIQRTKIQELSKEDYFSKNNE 464
           + R+E +D+   K  K K+     ++S  +    S   K   + K +ELSK+DYFSKNNE
Sbjct: 38  ERRKEKKDKS--KKEKHKSHSSEEKKSGEKHKTKSHKHKDKSKNKFEELSKDDYFSKNNE 97

Query: 465 LATWLKDVKNVYFSDLSSESAR 524
            ATWLKD KN++FSDLSSE+AR
Sbjct: 98  FATWLKDKKNLFFSDLSSETAR 117

Query: 525 584
           
Sbjct: 158 117

Query: 585 644
           
Sbjct: 218 117

Query: 645 648
           
Sbjct: 278 117

BLAST of MU56116 vs. TrEMBL
Match: A0A0D9VCP2_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-09
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 3

Query: 399 KIQTRREARD------QELQKMRKGKAE--GVIRERSARRRNLTSTLKAIQRTK---IQE 458
           K ++RR +RD      +E ++ RK K    G  ++RS++ ++     K+ ++ K    +E
Sbjct: 30  KKESRRSSRDDEDDDDEERRRRRKKKHGDGGKDKDRSSKEKHSKEKEKSKRKHKDDGFKE 89

Query: 459 LSKEDYFSKNNELATWLKDVKNVYFSDLSSESAR 518
           +SK+DYFSKNNE ATWLKD K  YFSDLSSESAR
Sbjct: 90  ISKDDYFSKNNEFATWLKDEKGKYFSDLSSESAR 123

Query: 519 578
           
Sbjct: 150 123

Query: 579 638
           
Sbjct: 210 123

Query: 639 648
           
Sbjct: 270 123

BLAST of MU56116 vs. TrEMBL
Match: F8QMT1_TOBAC (Stigma/style cell cycle inhibitor 1 (Fragment) OS=Nicotiana tabacum GN=SCI1 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-09
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 3

Query: 405 QTRREARDQ---ELQKMRKGKAEGVIRERSARRRNLTSTL-KAIQRTKIQELSKEDYFSK 464
           + RR+ +D+   E  K  K K      ++S  +    S   K   + K +ELSK+DYFSK
Sbjct: 37  EERRKEKDKSKKEKHKSHKSKCHSSEEKKSGEKHKTKSHKHKDKSKNKFEELSKDDYFSK 96

Query: 465 NNELATWLKDVKNVYFSDLSSESAR 524
           NNE A+WLKD KN++FSDLSSE+AR
Sbjct: 97  NNEFASWLKDKKNLFFSDLSSETAR 121

Query: 525 584
           
Sbjct: 157 121

Query: 585 644
           
Sbjct: 217 121

Query: 645 648
           
Sbjct: 277 121

BLAST of MU56116 vs. TrEMBL
Match: I1HXP6_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_3g05246 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.7e-09
Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 3

Query: 399 KIQTRREARD-----QELQKMRKGKAE----GVIRERSARRRNLTSTLKAIQRTK---IQ 458
           K + RR +RD     +E +K R+ K +    G  +ER ++ R      K+ Q+ K    +
Sbjct: 31  KKENRRSSRDGRGSDEEEEKRRRKKKKHGDKGKDKERDSKERRSKEKEKSKQKDKDAAFK 90

Query: 459 ELSKEDYFSKNNELATWLKDVKNVYFSDLSSESAR 518
           E+SK+DYF+K+NE ATWLK+ K  YFSDLSSESAR
Sbjct: 91  EISKDDYFAKSNEFATWLKEEKGKYFSDLSSESAR 125

Query: 519 578
           
Sbjct: 151 125

Query: 579 638
           
Sbjct: 211 125

Query: 639 648
           
Sbjct: 271 125

BLAST of MU56116 vs. TAIR10
Match: AT1G79200.1 (AT1G79200.1 unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-10
Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 3

Query: 411 RREARDQELQKMRKGKAEGVIRERSARRRNLTSTLKAIQRTKIQELSKEDYFSKNNELAT 470
           R + +D++  K  K       ++   ++++  S  K   +  I ELS EDYFSKNNE AT
Sbjct: 45  RSDKKDKKSHKHHKSSTSKKSKDDKPKKKHTESDHKL--KEGIPELSMEDYFSKNNEFAT 104

Query: 471 WLKDVKNVYFSDLSSESAR 530
           WLK+ K  YF+DL++E+AR
Sbjct: 105 WLKEEKRTYFNDLTTEAAR 121

Query: 531 590
           
Sbjct: 165 121

Query: 591 648
           
Sbjct: 225 121

BLAST of MU56116 vs. NCBI nr
Match: gi|659092525|ref|XP_008447104.1| (PREDICTED: protein PXR1 isoform X2 [Cucumis melo])

HSP 1 Score: 79.7 bits (195), Expect = 6.8e-12
Identity = 49/91 (53.85%), Postives = 56/91 (61.54%), Query Frame = 3

Query: 414 REARDQELQKMRKGKAEGVIRERSARRRNLTSTLKA-------------IQRTKIQELSK 473
           R A D+E +  R  K E    ++S +     S  K+             + RTKIQELSK
Sbjct: 31  RAAEDEERESRRSDKREKRKEKKSHKHSKSHSEKKSKDLHKGKHHKGDHLSRTKIQELSK 90

Query: 474 EDYFSKNNELATWLKDVKNVYFSDLSSESAR 533
           EDYFSKNNE ATWLKDVKNVYFSDLSSESAR
Sbjct: 91  EDYFSKNNEFATWLKDVKNVYFSDLSSESAR 121

Query: 534 593
           
Sbjct: 151 121

Query: 594 648
           
Sbjct: 211 121

BLAST of MU56116 vs. NCBI nr
Match: gi|659092523|ref|XP_008447103.1| (PREDICTED: protein FAM133A isoform X1 [Cucumis melo])

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11
Identity = 47/87 (54.02%), Postives = 55/87 (63.22%), Query Frame = 3

Query: 399 KIQTRREARDQELQKMRKGKAEGVIR----ERSARRRNLTSTLKAIQRTKIQELSKEDYF 458
           K + R+E +  +  K   G    V+         R R + +     +RTKIQELSKEDYF
Sbjct: 45  KREKRKEKKSHKHSKSHSGFQSKVLSCPAFFSQRRSRRIFTKASITRRTKIQELSKEDYF 104

Query: 459 SKNNELATWLKDVKNVYFSDLSSESAR 518
           SKNNE ATWLKDVKNVYFSDLSSESAR
Sbjct: 105 SKNNEFATWLKDVKNVYFSDLSSESAR 131

Query: 519 578
           
Sbjct: 165 131

Query: 579 638
           
Sbjct: 225 131

Query: 639 648
           
Sbjct: 285 131

BLAST of MU56116 vs. NCBI nr
Match: gi|449444142|ref|XP_004139834.1| (PREDICTED: protein FAM133B [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 2.6e-11
Identity = 48/91 (52.75%), Postives = 55/91 (60.44%), Query Frame = 3

Query: 414 REARDQELQKMRKGKAEGVIRERSARRRNLTSTLKA-------------IQRTKIQELSK 473
           R A D+E +  R  K E    ++S +     S  K+             + R KIQELSK
Sbjct: 31  RAAEDEERESRRSDKREKRKEKKSHKHSKRHSEKKSKDLHKGKHHKGDHLSRAKIQELSK 90

Query: 474 EDYFSKNNELATWLKDVKNVYFSDLSSESAR 533
           EDYFSKNNE ATWLKDVKNVYFSDLSSESAR
Sbjct: 91  EDYFSKNNEFATWLKDVKNVYFSDLSSESAR 121

Query: 534 593
           
Sbjct: 151 121

Query: 594 648
           
Sbjct: 211 121

BLAST of MU56116 vs. NCBI nr
Match: gi|295918073|gb|ADG60255.1| (stigma/style cell cycle inhibitor 1 [Nicotiana tabacum])

HSP 1 Score: 66.6 bits (161), Expect = 5.9e-08
Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 3

Query: 528 RTKIQELSKEDYFSKNNELATWLKDVKNVYFSDLSSESAR 587
           + K +ELSK+DYFSKNNE ATWLKD KN++FSDLSSE+AR
Sbjct: 1   KNKFEELSKDDYFSKNNEFATWLKDKKNLFFSDLSSETAR 40

Query: 588 647
           
Sbjct: 61  40

BLAST of MU56116 vs. NCBI nr
Match: gi|698488458|ref|XP_009790829.1| (PREDICTED: protein pxr1 [Nicotiana sylvestris])

HSP 1 Score: 66.6 bits (161), Expect = 5.9e-08
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 3

Query: 405 QTRREARDQELQKMRKGKAEGVIRERSARRRNLTSTL-KAIQRTKIQELSKEDYFSKNNE 464
           + R+E +D+   K  K K+     ++S  +    S   K   + K +ELSK+DYFSKNNE
Sbjct: 38  ERRKEKKDKS--KKEKHKSHSSEEKKSGEKHKTKSHKHKDKSKNKFEELSKDDYFSKNNE 97

Query: 465 LATWLKDVKNVYFSDLSSESAR 524
            ATWLKD KN++FSDLSSE+AR
Sbjct: 98  FATWLKDKKNLFFSDLSSETAR 117

Query: 525 584
           
Sbjct: 158 117

Query: 585 644
           
Sbjct: 218 117

Query: 645 648
           
Sbjct: 278 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K434_CUCSA2.5e-1352.75Uncharacterized protein OS=Cucumis sativus GN=Csa_7G238960 PE=4 SV=1[more]
F8QMT0_TOBAC7.6e-1047.56Stigma/style cell cycle inhibitor OS=Nicotiana tabacum GN=SCI1 PE=2 SV=1[more]
A0A0D9VCP2_9ORYZ1.3e-0945.74Uncharacterized protein OS=Leersia perrieri PE=4 SV=1[more]
F8QMT1_TOBAC1.3e-0945.88Stigma/style cell cycle inhibitor 1 (Fragment) OS=Nicotiana tabacum GN=SCI1 PE=2... [more]
I1HXP6_BRADI3.7e-0944.21Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_3g05246 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G79200.13.0e-1040.51 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659092525|ref|XP_008447104.1|6.8e-1253.85PREDICTED: protein PXR1 isoform X2 [Cucumis melo][more]
gi|659092523|ref|XP_008447103.1|1.2e-1154.02PREDICTED: protein FAM133A isoform X1 [Cucumis melo][more]
gi|449444142|ref|XP_004139834.1|2.6e-1152.75PREDICTED: protein FAM133B [Cucumis sativus][more]
gi|295918073|gb|ADG60255.1|5.9e-0875.00stigma/style cell cycle inhibitor 1 [Nicotiana tabacum][more]
gi|698488458|ref|XP_009790829.1|5.9e-0847.56PREDICTED: protein pxr1 [Nicotiana sylvestris][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C012609MELO3C012609gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
46D34C0946D34C09EST