MU55676 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU55676
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	ATP synthase mitochondrial F1 complex assembly factor 1
Location	chr8 : 1655965 .. 1659961 (-)
Sequence length	732

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AGCACACAAACTGTTTGATGGAATTTCTCAGGTGTCTACTCCACATATTTGCTAGTTTCAGTTTCGACCTAGAGTTTACATTGCATAAGCTCGGAACAGTGAACAGGTTTCCACAGCAAGGACTTGTTTGTCATCGTCGTTCTTCTTCCTCGTAGGTGAAAGTGTGAACGGGCGATGCGATCGAAAAACTGTTCCCTCAATTGATTGTTGAATCCCCTTTCTCTGCGATGCGAAGCTCTTCGTTACGGACATTGAGGACCATTGCTGGTTCTGTGAAAACTGTTCTCGCCAGTTCTTCGCCAGTGGTTCGGCAATCTTCTCGTTCTTATTTTGCTAATCTGAGTCTTGGGAAACTGCAAAAGGAAGCTAATCCTAGTGATTTCCTCAAATGGTCTTCGCTTGGTTTCTTTCGGACTTCAAAATTCGCTACTGGGTTCACCCCATTGCAACCAAAGCCGCTGAATTCGATCATTGATATGGAGAGGGTGAAAGATCGGTCACCGGAGGACCTCGCTTCCATCTGGGATGATTATCATTTGGGAAGAGGCCATATTGGGATATCGATGAAAGCTAAACTATATCATTTATTGGAACATCGAGCAGCAGATTGCCGCTACTTTGTTATTCCTTTGTGGCGTGGAAGTGGCTATACTACCATGTTTGTTCAAGTACAAATGCCGCATATCATTTTCACTGGCCTTGAAGATTATAAGGCTAGAGGAACCCAAGCAG

Library


Library category	ESTs
melon 46d library	1

Homology

[Close]

BLAST of MU55676 vs. TrEMBL
Match: A0A0A0KI74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518330 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.6e-77
Identity = 147/168 (87.50%), Postives = 150/168 (89.29%), Query Frame = 3


Query: 228 MRSSSLRTLRTIAGSVKTVLAXXXXXXXXXXXXYFANLSLGKLQKEANPSDFLKWSSLGF 287
           MRSSSL+TLRTIAGSVKTV+A            YFAN SLGKLQKE NPSDFLKWSSLGF
Sbjct: 1   MRSSSLQTLRTIAGSVKTVIASSSPVVRQSSRSYFANPSLGKLQKETNPSDFLKWSSLGF 60

Query: 288 FRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 347
           FRTSKFATGF PLQPKPL+SIIDMER KDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL
Sbjct: 61  FRTSKFATGFNPLQPKPLDSIIDMERAKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 120

Query: 348 LEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQA 407
           LE RAADCRYFVIPLWRGSGYTTMFVQVQ PHIIFTGLEDYKARGTQA
Sbjct: 121 LEQRAADCRYFVIPLWRGSGYTTMFVQVQTPHIIFTGLEDYKARGTQA 168

Query: 408  467
           
Sbjct: 181  168

Query: 468  527
           
Sbjct: 241  168

Query: 528  587
           
Sbjct: 301  168

Query: 588  647
           
Sbjct: 361  168

Query: 648  707
           
Sbjct: 421  168

Query: 708  732
           
Sbjct: 481  168

[Close]

BLAST of MU55676 vs. TrEMBL
Match: W9RFR7_9ROSA (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Morus notabilis GN=L484_008865 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.5e-57
Identity = 106/133 (79.70%), Postives = 120/133 (90.23%), Query Frame = 3


Query: 333 ANLSLGKLQKEANPSDFLKWSSLGFFRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDL 392
           A   L  + +++ P +F+KW SLGFFRTS+FATGFTPLQPKPL+SI+D+ERVKDRS ED+
Sbjct: 34  ARQDLQHVAEKSIPGEFVKWGSLGFFRTSRFATGFTPLQPKPLDSIMDIERVKDRSAEDI 93

Query: 393 ASIWDDYHLGRGHIGISMKAKLYHLLEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIF 452
           ASIWDDYHLGRGHIG SMKAKL+HLLE RAADCRYFVIPLWRGSGYTTMFVQVQMPH++ 
Sbjct: 94  ASIWDDYHLGRGHIGASMKAKLFHLLEQRAADCRYFVIPLWRGSGYTTMFVQVQMPHMLI 153

Query: 453 TGLEDYKARGTQA 512
           TGLEDYKARGTQA
Sbjct: 154 TGLEDYKARGTQA 166

Query: 513  572
           
Sbjct: 214  166

Query: 573  632
           
Sbjct: 274  166

Query: 633  692
           
Sbjct: 334  166

Query: 693  732
           
Sbjct: 394  166

[Close]

BLAST of MU55676 vs. TrEMBL
Match: A0A151RPR8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_033945 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.1e-56
Identity = 101/127 (79.53%), Postives = 116/127 (91.34%), Query Frame = 3


Query: 351 KLQKEANPSDFLKWSSLGFFRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDD 410
           KL ++  P DFLKW S+GF RTS+FATGF PLQPKPL+SI+D+ R+KDR PED+AS+WDD
Sbjct: 38  KLHQQEIPGDFLKWGSIGFCRTSRFATGFNPLQPKPLDSIVDVHRLKDRYPEDIASVWDD 97

Query: 411 YHLGRGHIGISMKAKLYHLLEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDY 470
           YH+GRGHIG SMKAKLYHLLEHRA++CRYFVIPLWRGSGYTTMFVQVQ PH++FTGLEDY
Sbjct: 98  YHIGRGHIGASMKAKLYHLLEHRASECRYFVIPLWRGSGYTTMFVQVQTPHMLFTGLEDY 157

Query: 471 KARGTQA 530
           KARGTQA
Sbjct: 158 KARGTQA 164

Query: 531  590
           
Sbjct: 218  164

Query: 591  650
           
Sbjct: 278  164

Query: 651  710
           
Sbjct: 338  164

Query: 711  732
           
Sbjct: 398  164

[Close]

BLAST of MU55676 vs. TrEMBL
Match: V4U9Q7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016425mg PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.5e-56
Identity = 111/164 (67.68%), Postives = 129/164 (78.66%), Query Frame = 3


Query: 240 SLRTLRTIAGSVKTVLAXXXXXXXXXXXXYFANLSLGKLQKEANPSDFLKWSSLGFFRTS 299
           S R LRT   SVK +              +  N ++ K +++A P DFLKWSSLG +RTS
Sbjct: 5   SSRFLRTKVSSVKDLFTKTSSSYSFTA--FPVNPTIQKQREKAIPCDFLKWSSLGLYRTS 64

Query: 300 KFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHLLEHR 359
           +FATGFTPLQPKPL+SIID+ER KD+S EDLA+IWDDYHLGRGHIG S+K +LY LLEHR
Sbjct: 65  RFATGFTPLQPKPLDSIIDIERAKDKSAEDLATIWDDYHLGRGHIGASLKTQLYRLLEHR 124

Query: 360 AADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQA 419
           AADCRYFVIPLW+GSGY TMFVQVQ+PHI+ TGLEDYKARGTQA
Sbjct: 125 AADCRYFVIPLWKGSGYATMFVQVQLPHILVTGLEDYKARGTQA 166

Query: 420  479
           
Sbjct: 185  166

Query: 480  539
           
Sbjct: 245  166

Query: 540  599
           
Sbjct: 305  166

Query: 600  659
           
Sbjct: 365  166

Query: 660  719
           
Sbjct: 425  166

Query: 720  732
           
Sbjct: 485  166

[Close]

BLAST of MU55676 vs. TrEMBL
Match: A0A067JNF6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21515 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.6e-56
Identity = 105/125 (84.00%), Postives = 113/125 (90.40%), Query Frame = 3


Query: 357 QKEANPSDFLKWSSLGFFRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYH 416
           Q+   P  FLKW SLGF RTS+FATGFTPLQPKPL+SIIDMER K++SPEDLASIWDDYH
Sbjct: 42  QEPTVPGHFLKWVSLGFVRTSRFATGFTPLQPKPLDSIIDMERAKEKSPEDLASIWDDYH 101

Query: 417 LGRGHIGISMKAKLYHLLEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKA 476
           LGRGHIG +MK+KLYHLL  RAADCRYFVIPLWRGSGYTTMF QVQMPHI+FTGLEDYKA
Sbjct: 102 LGRGHIGATMKSKLYHLLVQRAADCRYFVIPLWRGSGYTTMFAQVQMPHILFTGLEDYKA 161

Query: 477 RGTQA 536
           RGTQA
Sbjct: 162 RGTQA 166

Query: 537  596
           
Sbjct: 222  166

Query: 597  656
           
Sbjct: 282  166

Query: 657  716
           
Sbjct: 342  166

Query: 717  732
           
Sbjct: 402  166

[Close]

BLAST of MU55676 vs. TAIR10
Match: AT2G34050.1 (AT2G34050.1 INVOLVED IN: protein complex assembly)

HSP 1 Score: 198.4 bits (503), Expect = 5.2e-51
Identity = 89/127 (70.08%), Postives = 107/127 (84.25%), Query Frame = 3


Query: 351 KLQKEANPSDFLKWSSLGFFRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDD 410
           KL + + P + +KW+SLG  R S+FA+GFTPLQ KPL+SI+D+ R K +SPE+L SIWDD
Sbjct: 42  KLSEASLPGNHIKWASLGSVRNSRFASGFTPLQQKPLDSIMDLARAKTKSPEELTSIWDD 101

Query: 411 YHLGRGHIGISMKAKLYHLLEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDY 470
           YHLGRGHIG++MKA+LY LLE RA++CRYFVIPLWRG+GY TMF QV+ PH+IFTGLEDY
Sbjct: 102 YHLGRGHIGLTMKAQLYRLLEQRASECRYFVIPLWRGNGYITMFAQVEAPHMIFTGLEDY 161

Query: 471 KARGTQA 530
           KARGTQA
Sbjct: 162 KARGTQA 168

Query: 531  590
           
Sbjct: 222  168

Query: 591  650
           
Sbjct: 282  168

Query: 651  710
           
Sbjct: 342  168

Query: 711  732
           
Sbjct: 402  168

[Close]

BLAST of MU55676 vs. NCBI nr
Match: gi|659078551|ref|XP_008439782.1| (PREDICTED: uncharacterized protein LOC103484474 [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 1.3e-83
Identity = 156/168 (92.86%), Postives = 156/168 (92.86%), Query Frame = 3


Query: 228 MRSSSLRTLRTIAGSVKTVLAXXXXXXXXXXXXYFANLSLGKLQKEANPSDFLKWSSLGF 287
           MRSSSLRTLRTIAGSVKTVLA            YFANLSLGKLQKEANPSDFLKWSSLGF
Sbjct: 1   MRSSSLRTLRTIAGSVKTVLASSSPVVRQSSRSYFANLSLGKLQKEANPSDFLKWSSLGF 60

Query: 288 FRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 347
           FRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL
Sbjct: 61  FRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 120

Query: 348 LEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQA 407
           LEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQA
Sbjct: 121 LEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQA 168

Query: 408  467
           
Sbjct: 181  168

Query: 468  527
           
Sbjct: 241  168

Query: 528  587
           
Sbjct: 301  168

Query: 588  647
           
Sbjct: 361  168

Query: 648  707
           
Sbjct: 421  168

Query: 708  732
           
Sbjct: 481  168

[Close]

BLAST of MU55676 vs. NCBI nr
Match: gi|449434306|ref|XP_004134937.1| (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 2.1e-78
Identity = 147/168 (87.50%), Postives = 150/168 (89.29%), Query Frame = 3


Query: 228 MRSSSLRTLRTIAGSVKTVLAXXXXXXXXXXXXYFANLSLGKLQKEANPSDFLKWSSLGF 287
           MRSSSL+TLRTIAGSVKTV+A            YFAN SLGKLQKE NPSDFLKWSSLGF
Sbjct: 1   MRSSSLQTLRTIAGSVKTVIASSSPVVRQSSRSYFANPSLGKLQKETNPSDFLKWSSLGF 60

Query: 288 FRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 347
           FRTSKFATGF PLQPKPL+SIIDMER KDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL
Sbjct: 61  FRTSKFATGFNPLQPKPLDSIIDMERAKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 120

Query: 348 LEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQA 407
           LE RAADCRYFVIPLWRGSGYTTMFVQVQ PHIIFTGLEDYKARGTQA
Sbjct: 121 LEQRAADCRYFVIPLWRGSGYTTMFVQVQTPHIIFTGLEDYKARGTQA 168

Query: 408  467
           
Sbjct: 181  168

Query: 468  527
           
Sbjct: 241  168

Query: 528  587
           
Sbjct: 301  168

Query: 588  647
           
Sbjct: 361  168

Query: 648  707
           
Sbjct: 421  168

Query: 708  732
           
Sbjct: 481  168

[Close]

BLAST of MU55676 vs. NCBI nr
Match: gi|703118127|ref|XP_010101534.1| (ATP synthase mitochondrial F1 complex assembly factor 1 [Morus notabilis])

HSP 1 Score: 233.8 bits (595), Expect = 3.2e-58
Identity = 106/133 (79.70%), Postives = 120/133 (90.23%), Query Frame = 3


Query: 333 ANLSLGKLQKEANPSDFLKWSSLGFFRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDL 392
           A   L  + +++ P +F+KW SLGFFRTS+FATGFTPLQPKPL+SI+D+ERVKDRS ED+
Sbjct: 34  ARQDLQHVAEKSIPGEFVKWGSLGFFRTSRFATGFTPLQPKPLDSIMDIERVKDRSAEDI 93

Query: 393 ASIWDDYHLGRGHIGISMKAKLYHLLEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIF 452
           ASIWDDYHLGRGHIG SMKAKL+HLLE RAADCRYFVIPLWRGSGYTTMFVQVQMPH++ 
Sbjct: 94  ASIWDDYHLGRGHIGASMKAKLFHLLEQRAADCRYFVIPLWRGSGYTTMFVQVQMPHMLI 153

Query: 453 TGLEDYKARGTQA 512
           TGLEDYKARGTQA
Sbjct: 154 TGLEDYKARGTQA 166

Query: 513  572
           
Sbjct: 214  166

Query: 573  632
           
Sbjct: 274  166

Query: 633  692
           
Sbjct: 334  166

Query: 693  732
           
Sbjct: 394  166

[Close]

BLAST of MU55676 vs. NCBI nr
Match: gi|1012333140|gb|KYP44544.1| (hypothetical protein KK1_033945 [Cajanus cajan])

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-57
Identity = 101/127 (79.53%), Postives = 116/127 (91.34%), Query Frame = 3


Query: 351 KLQKEANPSDFLKWSSLGFFRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDD 410
           KL ++  P DFLKW S+GF RTS+FATGF PLQPKPL+SI+D+ R+KDR PED+AS+WDD
Sbjct: 38  KLHQQEIPGDFLKWGSIGFCRTSRFATGFNPLQPKPLDSIVDVHRLKDRYPEDIASVWDD 97

Query: 411 YHLGRGHIGISMKAKLYHLLEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDY 470
           YH+GRGHIG SMKAKLYHLLEHRA++CRYFVIPLWRGSGYTTMFVQVQ PH++FTGLEDY
Sbjct: 98  YHIGRGHIGASMKAKLYHLLEHRASECRYFVIPLWRGSGYTTMFVQVQTPHMLFTGLEDY 157

Query: 471 KARGTQA 530
           KARGTQA
Sbjct: 158 KARGTQA 164

Query: 531  590
           
Sbjct: 218  164

Query: 591  650
           
Sbjct: 278  164

Query: 651  710
           
Sbjct: 338  164

Query: 711  732
           
Sbjct: 398  164

[Close]

BLAST of MU55676 vs. NCBI nr
Match: gi|1021519571|ref|XP_016203204.1| (PREDICTED: uncharacterized protein LOC107643960 [Arachis ipaensis])

HSP 1 Score: 231.5 bits (589), Expect = 1.6e-57
Identity = 102/127 (80.31%), Postives = 117/127 (92.13%), Query Frame = 3


Query: 351 KLQKEANPSDFLKWSSLGFFRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDD 410
           K Q+   P DF KW S GF+RTSKFA+GFTPLQPKPL+S++D+ER+KDR P+D+ASIWDD
Sbjct: 35  KSQQPEIPGDFRKWGSAGFYRTSKFASGFTPLQPKPLDSVVDVERLKDRYPDDIASIWDD 94

Query: 411 YHLGRGHIGISMKAKLYHLLEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDY 470
           YHLGRGHIG SMKAKLY+LLEHRA++CRYFVIP+WRGSGYTTMFVQVQMPHI+FTGLEDY
Sbjct: 95  YHLGRGHIGASMKAKLYNLLEHRASECRYFVIPVWRGSGYTTMFVQVQMPHILFTGLEDY 154

Query: 471 KARGTQA 530
           KARGTQA
Sbjct: 155 KARGTQA 161

Query: 531  590
           
Sbjct: 215  161

Query: 591  650
           
Sbjct: 275  161

Query: 651  710
           
Sbjct: 335  161

Query: 711  732
           
Sbjct: 395  161

The following BLAST results are available for this feature:

BLAST of MU55676 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI74_CUCSA	1.6e-77	87.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518330 PE=4 SV=1	[more]
W9RFR7_9ROSA	5.5e-57	79.70	ATP synthase mitochondrial F1 complex assembly factor 1 OS=Morus notabilis GN=L4...	[more]
A0A151RPR8_CAJCA	2.1e-56	79.53	Uncharacterized protein OS=Cajanus cajan GN=KK1_033945 PE=4 SV=1	[more]
V4U9Q7_9ROSI	3.5e-56	67.68	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016425mg PE=4 SV=1	[more]
A0A067JNF6_JATCU	4.6e-56	84.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21515 PE=4 SV=1	[more]

BLAST of MU55676 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34050.1	5.2e-51	70.08	INVOLVED IN: protein complex assembly	[more]

BLAST of MU55676 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659078551\|ref\|XP_008439782.1\|	1.3e-83	92.86	PREDICTED: uncharacterized protein LOC103484474 [Cucumis melo]	[more]
gi\|449434306\|ref\|XP_004134937.1\|	2.1e-78	87.50	PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis sati...	[more]
gi\|703118127\|ref\|XP_010101534.1\|	3.2e-58	79.70	ATP synthase mitochondrial F1 complex assembly factor 1 [Morus notabilis]	[more]
gi\|1012333140\|gb\|KYP44544.1\|	1.2e-57	79.53	hypothetical protein KK1_033945 [Cajanus cajan]	[more]
gi\|1021519571\|ref\|XP_016203204.1\|	1.6e-57	80.31	PREDICTED: uncharacterized protein LOC107643960 [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR010591	ATP11

Vocabulary: **Cellular Component**
Term	Definition
GO:0005739	mitochondrion

Vocabulary: **Biological Process**
Term	Definition
GO:0006461	protein complex assembly

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006461	protein complex assembly
cellular_component	GO:0005739	mitochondrion

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C007238	MELO3C007238	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
46D10C04	46D10C04	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010591	ATP11	PANTHER	PTHR13126	CHAPERONE ATP11	coord: 40..168 score: 1.5
IPR010591	ATP11	PFAM	PF06644	ATP11	coord: 72..168 score: 3.8
None	No IPR available	PANTHER	PTHR13126:SF0	ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 1	coord: 40..168 score: 1.5