MU54939 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU54939
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	ABC1-like kinase
Location	chr2 : 119238 .. 119904 (-)
Sequence length	667

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GAAGCTATTCGTGTGACTGAAGCTTTTGTTTTAGGGACGGTAAATGATACGTATAATTCTATCCCTGATTTTATGAGAACTCTATTATTTAGGGATAATGGTCCTCGAGCTCTTGGTATGAGCAATGAAGAGAAAGAAAGTATGGTAGAGCTTCGAGATCAGGTACTGAGGATATGGAGACTACTTCAGTCTTCTGAAAATTTTGATCCTACACTTTTGCAACCCATTGTGCAGGTACGAATTAGCATGTTTTTCTTTTTGTGCTTTACTGAAGCTGCTACCTGTTGATACACAAATTTGAAACCACTATGTCCGAAGGAGACTTTGTTATTATTATAATTAAATGTGGCTCGCATTTCGTTGCTGATGAGAATCTCATGTGAGATGAAGTTCAATTTAAACCATATATAACTTGCCTAAATTTGTTAAATATCTTCTACAAACAGGTCCTACAACAGCCTGAGGCTCGCAGTTTTGGTGGGCGCATTTTCAGTGGGATTACTCAGCGTCTTGCAGCTCGGATGCTTCAACAAGTACTTCGAGCTTCAACGACAGTGTCTGCTTCGACTGTATAACCATTGTTGATTTGTGTACCTTTGTTAATTTCTTCGACATTCAATAATATCACTGCTGGTATATTCGTCATTGTTGCATCAATAGTGATACT

Library


Library category	ESTs
melon 15d library	1

Homology

[Close]

BLAST of MU54939 vs. Swiss-Prot
Match: Y1796_ARATH (Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-21
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EA+RV+EA  LGTV DTYNS+P+F+R+L+F  NG   L MS  E +S +ELRDQV RIW 
Sbjct: 592 EAVRVSEAIALGTVVDTYNSLPEFLRSLVFNGNGNGPLTMSTAELQSTLELRDQVSRIWG 651

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LLQSSE+FDP +LQPI+QV
Sbjct: 652 LLQSSESFDPAILQPILQV 670

Query: 121  180
           
Sbjct: 712  670

Query: 181  238
           
Sbjct: 772  670

HSP 2 Score: 56.2 bits (134), Expect = 5.2e-07
Identity = 28/40 (70.00%), Postives = 30/40 (75.00%), Query Frame = 3


Query: 444 QVLQQPEARSFGGRIFSGITQRLAARMLQQVLRASTTVSA 503
           QVLQQPEAR  GGR+  G+ QRLAAR LQQ+LRA+T  SA
Sbjct: 669 QVLQQPEARRLGGRVAGGVGQRLAARFLQQLLRATTPSSA 708

Query: 504  563
           
Sbjct: 729  708

[Close]

BLAST of MU54939 vs. TrEMBL
Match: A0A0A0LYV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560790 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.1e-35
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNG RALGMSNEEKESMVELRDQVLRIWR
Sbjct: 587 EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGSRALGMSNEEKESMVELRDQVLRIWR 646

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LLQSSENFDPTLLQPIVQV
Sbjct: 647 LLQSSENFDPTLLQPIVQV 665

Query: 121  180
           
Sbjct: 707  665

Query: 181  238
           
Sbjct: 767  665

[Close]

BLAST of MU54939 vs. TrEMBL
Match: A0A0A0LYV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560790 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.2e-12
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 3


Query: 444 QVLQQPEARSFGGRIFSGITQRLAARMLQQVLRASTTVSAST 503
           QVLQQPEARSFGGRIFSGITQRLAARMLQQVLRASTTVSAST
Sbjct: 664 QVLQQPEARSFGGRIFSGITQRLAARMLQQVLRASTTVSAST 705

Query: 504  563
           
Sbjct: 724  705

Query: 564  570
           
Sbjct: 784  705

HSP 2 Score: 112.8 bits (281), Expect = 5.2e-22
Identity = 59/79 (74.68%), Postives = 63/79 (79.75%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EAIRVTEA VL TV DTYNSIPD MRTL+F  N    L MS  E+ESM+ELRDQV RIW 
Sbjct: 506 EAIRVTEAVVLSTVIDTYNSIPDVMRTLVFNGNTTGPLVMSGSEQESMLELRDQVFRIWG 565

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LLQSSENFDP LLQPI+QV
Sbjct: 566 LLQSSENFDPALLQPILQV 584

Query: 121  180
           
Sbjct: 626  584

Query: 181  238
           
Sbjct: 686  584

[Close]

BLAST of MU54939 vs. TrEMBL
Match: A0A097PQK7_PLAAC (ABC1-like kinase (Fragment) OS=Platanus acerifolia PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.8e-05
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 3


Query: 444 QVLQQPEARSFGGRIFSGITQRLAARMLQQVLRA 503
           QVLQ+PEAR+ GGR+  GITQRLAAR+LQQ+LRA
Sbjct: 583 QVLQEPEARNLGGRVIGGITQRLAARLLQQLLRA 616

Query: 504  546
           
Sbjct: 643  616

HSP 2 Score: 110.5 bits (275), Expect = 2.6e-21
Identity = 56/79 (70.89%), Postives = 62/79 (78.48%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EA+RVTEA  L TV DTYNS+P FMRTL+F  NG   L MS  E ESM+ELRDQV RIW 
Sbjct: 506 EAVRVTEAVALCTVVDTYNSVPPFMRTLMFNGNGGGPLAMSAAELESMIELRDQVFRIWG 565

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LL+SSENFDP LLQPI+QV
Sbjct: 566 LLRSSENFDPALLQPILQV 584

Query: 121  180
           
Sbjct: 626  584

Query: 181  238
           
Sbjct: 686  584

[Close]

BLAST of MU54939 vs. TrEMBL
Match: A0A097PQF9_THECC (ABC1-like kinase (Fragment) OS=Theobroma cacao PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.9e-03
Identity = 25/33 (75.76%), Postives = 28/33 (84.85%), Query Frame = 3


Query: 444 QVLQQPEARSFGGRIFSGITQRLAARMLQQVLR 503
           QVLQQ +AR  GGR+  GITQRLAAR+LQQVLR
Sbjct: 583 QVLQQRDARMLGGRVVGGITQRLAARLLQQVLR 615

Query: 504  543
           
Sbjct: 643  615

HSP 2 Score: 110.5 bits (275), Expect = 2.6e-21
Identity = 56/79 (70.89%), Postives = 62/79 (78.48%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EA+RVTEA  L TV DTYNS+P FMRTL+F  NG   L MS  E ESM+ELRDQV RIW 
Sbjct: 572 EAVRVTEAVALCTVVDTYNSVPPFMRTLMFNGNGGGPLAMSAAELESMIELRDQVFRIWG 631

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LL+SSENFDP LLQPI+QV
Sbjct: 632 LLRSSENFDPALLQPILQV 650

Query: 121  180
           
Sbjct: 692  650

Query: 181  238
           
Sbjct: 752  650

[Close]

BLAST of MU54939 vs. TrEMBL
Match: A0A061FSI1_THECC (Kinase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_045616 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.2e-04
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 3


Query: 444 QVLQQPEARSFGGRIFSGITQRLAARMLQQVLRASTTVSAS 503
           QVLQQ +AR  GGR+  GITQRLAAR+LQQVLR  T  ++S
Sbjct: 649 QVLQQRDARMLGGRVVGGITQRLAARLLQQVLRTPTVPTSS 689

Query: 504  563
           
Sbjct: 709  689

Query: 564  567
           
Sbjct: 769  689

HSP 2 Score: 109.0 bits (271), Expect = 7.5e-21
Identity = 55/79 (69.62%), Postives = 65/79 (82.28%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EA+RVTEA +LGTV DTYNSIP+ MRTL+   N    L MS+ E+E+M++LRDQV RIWR
Sbjct: 513 EAVRVTEAVILGTVIDTYNSIPNPMRTLIVSGNTAGPLMMSDTEQENMIKLRDQVFRIWR 572

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LL+SSENFDP LLQPIVQV
Sbjct: 573 LLRSSENFDPALLQPIVQV 591

Query: 121  180
           
Sbjct: 633  591

Query: 181  238
           
Sbjct: 693  591

[Close]

BLAST of MU54939 vs. TAIR10
Match: AT1G79600.1 (AT1G79600.1 Protein kinase superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 9.4e-23
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EA+RV+EA  LGTV DTYNS+P+F+R+L+F  NG   L MS  E +S +ELRDQV RIW 
Sbjct: 592 EAVRVSEAIALGTVVDTYNSLPEFLRSLVFNGNGNGPLTMSTAELQSTLELRDQVSRIWG 651

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LLQSSE+FDP +LQPI+QV
Sbjct: 652 LLQSSESFDPAILQPILQV 670

Query: 121  180
           
Sbjct: 712  670

Query: 181  238
           
Sbjct: 772  670

HSP 2 Score: 56.2 bits (134), Expect = 2.9e-08
Identity = 28/40 (70.00%), Postives = 30/40 (75.00%), Query Frame = 3


Query: 444 QVLQQPEARSFGGRIFSGITQRLAARMLQQVLRASTTVSA 503
           QVLQQPEAR  GGR+  G+ QRLAAR LQQ+LRA+T  SA
Sbjct: 669 QVLQQPEARRLGGRVAGGVGQRLAARFLQQLLRATTPSSA 708

Query: 504  563
           
Sbjct: 729  708

[Close]

BLAST of MU54939 vs. NCBI nr
Match: gi|659099243|ref|XP_008450502.1| (PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Cucumis melo])

HSP 1 Score: 159.8 bits (403), Expect = 5.3e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR
Sbjct: 584 EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 643

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LLQSSENFDPTLLQPIVQV
Sbjct: 644 LLQSSENFDPTLLQPIVQV 662

Query: 121  180
           
Sbjct: 704  662

Query: 181  238
           
Sbjct: 764  662

[Close]

BLAST of MU54939 vs. NCBI nr
Match: gi|449435585|ref|XP_004135575.1| (PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 4.5e-35
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNG RALGMSNEEKESMVELRDQVLRIWR
Sbjct: 587 EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGSRALGMSNEEKESMVELRDQVLRIWR 646

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LLQSSENFDPTLLQPIVQV
Sbjct: 647 LLQSSENFDPTLLQPIVQV 665

Query: 121  180
           
Sbjct: 707  665

Query: 181  238
           
Sbjct: 767  665

[Close]

BLAST of MU54939 vs. NCBI nr
Match: gi|502146484|ref|XP_004506473.1| (PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic-like [Cicer arietinum])

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22
Identity = 53/79 (67.09%), Postives = 66/79 (83.54%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EA+RV+EAF LGT++DTY  IPDF+RTL+F  N    L MS  E++SM+ELRDQV+RIWR
Sbjct: 601 EAVRVSEAFTLGTISDTYQYIPDFLRTLVFNGNAKEPLMMSETERQSMIELRDQVIRIWR 660

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LLQSS +FDP+LLQPI+QV
Sbjct: 661 LLQSSNDFDPSLLQPILQV 679

Query: 121  180
           
Sbjct: 721  679

Query: 181  238
           
Sbjct: 781  679

[Close]

BLAST of MU54939 vs. NCBI nr
Match: gi|700257455|gb|AIU50334.1| (ABC1-like kinase, partial [Platanus x acerifolia])

HSP 1 Score: 114.4 bits (285), Expect = 2.6e-22
Identity = 59/79 (74.68%), Postives = 63/79 (79.75%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EAIRVTEA VL TV DTYNSIPD MRTL+F  N    L MS  E+ESM+ELRDQV RIW 
Sbjct: 506 EAIRVTEAVVLSTVIDTYNSIPDVMRTLVFNGNTTGPLVMSGSEQESMLELRDQVFRIWG 565

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LLQSSENFDP LLQPI+QV
Sbjct: 566 LLQSSENFDPALLQPILQV 584

Query: 121  180
           
Sbjct: 626  584

Query: 181  238
           
Sbjct: 686  584

[Close]

BLAST of MU54939 vs. NCBI nr
Match: gi|1009126162|ref|XP_015880003.1| (PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic isoform X1 [Ziziphus jujuba])

HSP 1 Score: 112.8 bits (281), Expect = 7.5e-22
Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 1


Query: 1   EAIRVTEAFVLGTVNDTYNSIPDFMRTLLFRDNGPRALGMSNEEKESMVELRDQVLRIWR 60
           EA+R+TEAFVLGTV DTYNSIPD +R L+F  N    + MS  E+++M+ELRDQV RIW 
Sbjct: 596 EAVRITEAFVLGTVIDTYNSIPDLLRALMFNGNASGVISMSKTEQQNMIELRDQVYRIWG 655

Query: 61  LLQSSENFDPTLLQPIVQV 120
           LL+SSENFDP+L QPI+QV
Sbjct: 656 LLRSSENFDPSLFQPILQV 674

Query: 121  180
           
Sbjct: 716  674

Query: 181  238
           
Sbjct: 776  674

The following BLAST results are available for this feature:

BLAST of MU54939 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1796_ARATH	1.7e-21	64.56	Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic O...	[more]

BLAST of MU54939 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYV6_CUCSA	9.1e-35	98.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560790 PE=4 SV=1	[more]
A0A0A0LYV6_CUCSA	2.2e-12	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560790 PE=4 SV=1	[more]
A0A097PQK7_PLAAC	5.8e-05	76.47	ABC1-like kinase (Fragment) OS=Platanus acerifolia PE=2 SV=1	[more]
A0A097PQF9_THECC	1.9e-03	75.76	ABC1-like kinase (Fragment) OS=Theobroma cacao PE=2 SV=1	[more]
A0A061FSI1_THECC	2.2e-04	65.85	Kinase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_045616 PE=4 SV=1	[more]

BLAST of MU54939 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79600.1	9.4e-23	64.56	Protein kinase superfamily protein	[more]

BLAST of MU54939 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099243\|ref\|XP_008450502.1\|	5.3e-36	100.00	PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chlo...	[more]
gi\|449435585\|ref\|XP_004135575.1\|	4.5e-35	98.73	PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chlo...	[more]
gi\|502146484\|ref\|XP_004506473.1\|	1.5e-22	67.09	PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chlo...	[more]
gi\|700257455\|gb\|AIU50334.1\|	2.6e-22	74.68	ABC1-like kinase, partial [Platanus x acerifolia]	[more]
gi\|1009126162\|ref\|XP_015880003.1\|	7.5e-22	65.82	PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chlo...	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C015233	MELO3C015233	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
15D08B05	15D08B05	EST