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| Name | MU54892 |
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| Type | transcribed_cluster |
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| Organism | Cucumis melo (Melon (DHL92) v3.5.1) |
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| Description | Vacuolar protein sorting-associated protein 9A |
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| Location | chr5 : 11630679 .. 11631356 (+) |
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| Sequence length | 673 |
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The following sequences are available for this feature:
transcribed_cluster sequence AGCTTCTTAGTCAATATAAACAACTTGTTTTCAAGTATGTTTCCCTTTCTAGAGGGCTGGGTCTTACAACTGAGTTATCATCCTATTCAAATTCTGAAATGTATTCCCAACATCATCACGAGTCTTTCAAAGAACCTGAAGATGTTAGAGATATGACATCAAATGATGAGTCCGCTGGAGAGGGACATAGGTTAATTGATGGTCCAGATGGAACATCGCTGTTTGGAGAAGAAAATGTTGGATCGGGGTTAGACAAGGTAGTGCTACCTCAACATGAAGGAAACAACGAAATGTCTCAATCCTAGCACCTTCAACATTTTTTTTTCAGTCTGATTATCTTCCTCAAATTTCTGCCCATCAGCAAAGAGATCATGTGAGGAGAATATGATGTTTTACGTAGATGATGAGTAATAGCATTAGACGTCAACCAAGGAAATTTAGCCCTGATTTTGGATCCGGCAACGGCCAGTAAATCAGATCACCTCCACGAAGACATACTGATGGCTATCAGACTCAAAAATTCTTCCCATGTTTCAACAAGTATATCTCTATTTTTCTCCACTTGTAACATTGTAGCAATTTCATTCGGGAGCATATCAATAAATTTATAGATTGAAAAGACTTGGACTTCATATCAATATACATTGATCATTTTTTAATTAAACCATGTACT
BLAST of MU54892 vs. TrEMBL
Match: A0A0A0LI50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G128630 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 2.7e-42 Identity = 91/102 (89.22%), Postives = 94/102 (92.16%), Query Frame = 3
Query: 3 LLSQYKQLVFKYVSLSRGLGLTTELSSYSNSEMYSQHHHESFKEPEDVRDMTSNDESAGE 62
LLSQYKQLVFKYVSLSRGL LTTE SSYS SEM+SQHHHESFKEPEDVRD+TSNDESAG+
Sbjct: 373 LLSQYKQLVFKYVSLSRGLSLTTEFSSYSKSEMHSQHHHESFKEPEDVRDVTSNDESAGD 432
Query: 63 GHRLIDGPDGTSLFGEENVGSGL--DKVVLPQHEGNNEMSQS 122
HRLIDGPDGTSLFGEENVGSGL DKV LPQ EGNNEMSQS
Sbjct: 433 RHRLIDGPDGTSLFGEENVGSGLPQDKVELPQREGNNEMSQS 474
Query: 123 182
Sbjct: 493 474
Query: 183 242
Sbjct: 553 474
Query: 243 302
Sbjct: 613 474
BLAST of MU54892 vs. TrEMBL
Match: B9RJC2_RICCO (Vacuolar protein sorting-associated protein VPS9, putative OS=Ricinus communis GN=RCOM_1033030 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.6e-08 Identity = 45/102 (44.12%), Postives = 57/102 (55.88%), Query Frame = 3
Query: 3 LLSQYKQLVFKYVSLSRGLGLTTELSSYSNSEMYSQHHHESFKEPEDVRDMTSNDESAGE 62
LL YKQLVFKYV LS+GLG TT SNS+ + QH E+ KE + R + +NDES +
Sbjct: 378 LLYNYKQLVFKYVCLSKGLGGTTPSLRLSNSQTHFQHATETIKEHLETRSVEANDESQKQ 437
Query: 63 GHRLIDGPDGT-SLFGEENV--GSGLDKVVLPQHEGNNEMSQ 122
+ GT SL EEN S ++ + Q EG E SQ
Sbjct: 438 TAK--TNSSGTFSLVSEENFESKSPQEEAIALQEEGKEETSQ 477
Query: 123 182
Sbjct: 498 477
Query: 183 242
Sbjct: 558 477
Query: 243 300
Sbjct: 618 477
BLAST of MU54892 vs. NCBI nr
Match: gi|659082124|ref|XP_008441683.1| (PREDICTED: vacuolar protein sorting-associated protein 9A-like [Cucumis melo]) HSP 1 Score: 199.1 bits (505), Expect = 8.0e-48 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 3
Query: 3 LLSQYKQLVFKYVSLSRGLGLTTELSSYSNSEMYSQHHHESFKEPEDVRDMTSNDESAGE 62
LLSQYKQLVFKYVSLSRGLGLTTELSSYSNSEMYSQHHHESFKEPEDVRDMTSNDESAGE
Sbjct: 373 LLSQYKQLVFKYVSLSRGLGLTTELSSYSNSEMYSQHHHESFKEPEDVRDMTSNDESAGE 432
Query: 63 GHRLIDGPDGTSLFGEENVGSGLDKVVLPQHEGNNEMSQS 122
GHRLIDGPDGTSLFGEENVGSGLDKVVLPQHEGNNEMSQS
Sbjct: 433 GHRLIDGPDGTSLFGEENVGSGLDKVVLPQHEGNNEMSQS 472
Query: 123 182
Sbjct: 493 472
Query: 183 242
Sbjct: 553 472
Query: 243 302
Sbjct: 613 472
BLAST of MU54892 vs. NCBI nr
Match: gi|778668345|ref|XP_004138949.2| (PREDICTED: vacuolar protein sorting-associated protein 9A-like isoform X1 [Cucumis sativus]) HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40 Identity = 91/102 (89.22%), Postives = 94/102 (92.16%), Query Frame = 3
Query: 3 LLSQYKQLVFKYVSLSRGLGLTTELSSYSNSEMYSQHHHESFKEPEDVRDMTSNDESAGE 62
LLSQYKQLVFKYVSLSRGL LTTE SSYS SEM+SQHHHESFKEPEDVRD+TSNDESAG+
Sbjct: 373 LLSQYKQLVFKYVSLSRGLSLTTEFSSYSKSEMHSQHHHESFKEPEDVRDVTSNDESAGD 432
Query: 63 GHRLIDGPDGTSLFGEENVGSGL--DKVVLPQHEGNNEMSQS 122
HRLIDGPDGTSLFGEENVGSGL DKV LPQ EGNNEMSQS
Sbjct: 433 RHRLIDGPDGTSLFGEENVGSGLPQDKVELPQREGNNEMSQS 474
Query: 123 182
Sbjct: 493 474
Query: 183 242
Sbjct: 553 474
Query: 243 302
Sbjct: 613 474
BLAST of MU54892 vs. NCBI nr
Match: gi|778668348|ref|XP_011649084.1| (PREDICTED: vacuolar protein sorting-associated protein 9A-like isoform X2 [Cucumis sativus]) HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40 Identity = 91/102 (89.22%), Postives = 94/102 (92.16%), Query Frame = 3
Query: 3 LLSQYKQLVFKYVSLSRGLGLTTELSSYSNSEMYSQHHHESFKEPEDVRDMTSNDESAGE 62
LLSQYKQLVFKYVSLSRGL LTTE SSYS SEM+SQHHHESFKEPEDVRD+TSNDESAG+
Sbjct: 262 LLSQYKQLVFKYVSLSRGLSLTTEFSSYSKSEMHSQHHHESFKEPEDVRDVTSNDESAGD 321
Query: 63 GHRLIDGPDGTSLFGEENVGSGL--DKVVLPQHEGNNEMSQS 122
HRLIDGPDGTSLFGEENVGSGL DKV LPQ EGNNEMSQS
Sbjct: 322 RHRLIDGPDGTSLFGEENVGSGLPQDKVELPQREGNNEMSQS 363
Query: 123 182
Sbjct: 382 363
Query: 183 242
Sbjct: 442 363
Query: 243 302
Sbjct: 502 363
BLAST of MU54892 vs. NCBI nr
Match: gi|255545562|ref|XP_002513841.1| (PREDICTED: vacuolar protein sorting-associated protein 9A [Ricinus communis]) HSP 1 Score: 59.7 bits (143), Expect = 7.5e-06 Identity = 45/102 (44.12%), Postives = 57/102 (55.88%), Query Frame = 3
Query: 3 LLSQYKQLVFKYVSLSRGLGLTTELSSYSNSEMYSQHHHESFKEPEDVRDMTSNDESAGE 62
LL YKQLVFKYV LS+GLG TT SNS+ + QH E+ KE + R + +NDES +
Sbjct: 378 LLYNYKQLVFKYVCLSKGLGGTTPSLRLSNSQTHFQHATETIKEHLETRSVEANDESQKQ 437
Query: 63 GHRLIDGPDGT-SLFGEENV--GSGLDKVVLPQHEGNNEMSQ 122
+ GT SL EEN S ++ + Q EG E SQ
Sbjct: 438 TAK--TNSSGTFSLVSEENFESKSPQEEAIALQEEGKEETSQ 477
Query: 123 182
Sbjct: 498 477
Query: 183 242
Sbjct: 558 477
Query: 243 300
Sbjct: 618 477
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| A0A0A0LI50_CUCSA | 2.7e-42 | 89.22 | Uncharacterized protein OS=Cucumis sativus GN=Csa_2G128630 PE=4 SV=1 | [more] |
| B9RJC2_RICCO | 5.6e-08 | 44.12 | Vacuolar protein sorting-associated protein VPS9, putative OS=Ricinus communis G... | [more] |
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
| Feature Name | Unique Name | Type |
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| 15D05D10 | 15D05D10 | EST |
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