MU54869 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU54869
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	E3 ubiquitin-protein ligase listerin
Location	chr12 : 275622 .. 276805 (-)
Sequence length	705

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CATGTTCAATGTCTAAAGAATCAAGACAGGGTATTCTTCGAAGATGCACCCTTGAATAACAAGATGACAGAGGACTTACCAAGTACAAAGTATCCAATGAGCTACTTACAAGATTTGAGAAAATGCATTGTCGAAATTCTCTCTAGCATTCACTTAGCGAAACATGATCTACTTTCTGTTTTTGCTATGGAATTTCAAAAGAATTGTATTGATATGTTCCAGTTGACAGATAATGTAGGAGTAGCCTCGGAAACTATAGAACAGATTATAGGATTTATATTAGAATTGGAACAACTTTCCATGGACAAGGATGATACCTGGCTCTTGGTTCACTTGGTAGGACCGACACTGGCAAATACTTTCCCCATTATACAATCACTTGACTCTTCGGATGGTGTGAGACTTCTATCTGCTGCAGTGTCCGTTTTTGGACCTCGCAAGATTGTTCGAGAATTATTTATCAATAATAATGGAATGTCCTCTACTAAGTTTTCTGGTGTTGAGGCCCAAGATTTGGAGGCAAGGCAATTCATGCAAGTATTTAATGACATTTTTGTTCCTTGGTGTTTGCAAGGAAACAATAGCTCTTCTAGTGCTCAATTAGATCTCTTGCTTGCACTAATTGATGATGAACATTTCTCTGATCAATGGCATTCTGTTATTAGTTACTCAACTAATTTAAATCATACTGAAGTTGTGCTTGAG

Library


Library category	ESTs
melon 15d library	1

Homology

[Close]

BLAST of MU54869 vs. Swiss-Prot
Match: LTN1_ARATH (E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana GN=At5g58410 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.5e-32
Identity = 77/213 (36.15%), Postives = 125/213 (58.69%), Query Frame = 1


Query: 49  PLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSVFAMEFQKNCIDMFQLT 108
           P N + + +       +SYLQ+L +CI+EILS I+L + +LLS F    Q++ ++M Q  
Sbjct: 489 PPNQRKSAENLGMGNSVSYLQELGRCILEILSGINLLEQNLLSFFCKAVQESFLNMLQQG 548

Query: 109 DNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANTFPIIQSLDSSDGVRLL 168
           D + + + ++ ++I F+L LE+ S+ + ++W L   +GP L+  FP I+S +  DGV+LL
Sbjct: 549 D-LEIVAGSMRKMIDFLLLLERYSVLEGESWPLHQFMGPLLSKAFPWIRSSELLDGVKLL 608

Query: 169 SAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQVFNDIFVPWCLQGNNXX 228
           S +VSVFGPRK+V  L   ++  +ST  S  + +++   + ++VF +IF+PWC+ G +  
Sbjct: 609 SVSVSVFGPRKVVPVLI--DDIETSTLLSVEKEKNMSPEKLIKVFQEIFIPWCMDGYDSS 668

Query: 229 XXXXXXXXXXXIDDEHFSDQWHSVISYSTNLNH 288
                      +DDE F+ QW  VISY  N  H
Sbjct: 669 TAARQDLLFSLLDDECFTQQWSDVISYVFNQQH 698

Query: 289  348
           
Sbjct: 729  698

Query: 349  408
           
Sbjct: 789  698

Query: 409  468
           
Sbjct: 849  698

Query: 469  528
           
Sbjct: 909  698

Query: 529  588
           
Sbjct: 969  698

Query: 589  648
           
Sbjct: 1029  698

Query: 649  688
           
Sbjct: 1089  698

[Close]

BLAST of MU54869 vs. TrEMBL
Match: A0A0A0LXT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533710 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.3e-116
Identity = 211/235 (89.79%), Postives = 218/235 (92.77%), Query Frame = 1


Query: 1   HVQCLKNQDRVFFEDAPLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSV 60
           HVQCLKNQDRVF ED PLNNKM ED+PSTKYPMSYLQDLRKCIVEILSSIHL KHDLLSV
Sbjct: 472 HVQCLKNQDRVFSEDEPLNNKMIEDIPSTKYPMSYLQDLRKCIVEILSSIHLVKHDLLSV 531

Query: 61  FAMEFQKNCIDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT 120
           FAMEFQKNC+DMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT
Sbjct: 532 FAMEFQKNCLDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT 591

Query: 121 FPIIQSLDSSDGVRLLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQV 180
           FPIIQSLDSSDGVRLLSAAVSVFGPRKIV+ELFINNNGMSST+FSGVEAQDLEARQFMQV
Sbjct: 592 FPIIQSLDSSDGVRLLSAAVSVFGPRKIVQELFINNNGMSSTEFSGVEAQDLEARQFMQV 651

Query: 181 FNDIFVPWCLQGNNXXXXXXXXXXXXXIDDEHFSDQWHSVISYSTNLNHTEVVLE 240
           FND+FVPWCLQGNN             IDDEHFSDQWHS+ISYSTNL+HTEVVLE
Sbjct: 652 FNDVFVPWCLQGNNSSSSARLDLLLALIDDEHFSDQWHSIISYSTNLDHTEVVLE 706

Query: 241  300
           
Sbjct: 712  706

Query: 301  360
           
Sbjct: 772  706

Query: 361  420
           
Sbjct: 832  706

Query: 421  480
           
Sbjct: 892  706

Query: 481  540
           
Sbjct: 952  706

Query: 541  600
           
Sbjct: 1012  706

Query: 601  660
           
Sbjct: 1072  706

Query: 661  706
           
Sbjct: 1132  706

[Close]

BLAST of MU54869 vs. TrEMBL
Match: A0A067KC49_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13148 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.4e-54
Identity = 115/229 (50.22%), Postives = 150/229 (65.50%), Query Frame = 1


Query: 10  CLKNQDRV---FFED-----APLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKH 69
           C KNQ        ED       ++N+ T +L + KYPM+YLQ+  KCIVEILS I+L + 
Sbjct: 270 CFKNQSSASNGISEDLSEKTCAISNQRTAELLTIKYPMNYLQESGKCIVEILSGIYLIER 329

Query: 70  DLLSVFAMEFQKNCIDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGP 129
           DLLS F + FQ+NC+ MFQL D+ G  +E +EQ+I F+L LE+ S+ KD+TW LV+LVGP
Sbjct: 330 DLLSTFCVAFQENCLKMFQLKDSTGRNTENVEQVIKFMLLLEEHSVRKDETWPLVYLVGP 389

Query: 130 TLANTFPIIQSLDSSDGVRLLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEAR 189
            LA  FP I+SLDS DG+RLLS AVS+FGPRKIV+ELF  N G  S   S    ++LE  
Sbjct: 390 MLAKCFPSIRSLDSPDGLRLLSVAVSLFGPRKIVKELFFYNEGHCSFPLSDDNEKELEPE 449

Query: 190 QFMQVFNDIFVPWCLQGNNXXXXXXXXXXXXXIDDEHFSDQWHSVISYS 249
            FMQVF + FVPWC  G +             +DDEHFS+QW +++SY+
Sbjct: 450 YFMQVFKETFVPWCFVGCDSSSNARIDLLLAFLDDEHFSEQWTAILSYA 498

Query: 250  309
           
Sbjct: 510  498

Query: 310  369
           
Sbjct: 570  498

Query: 370  429
           
Sbjct: 630  498

Query: 430  489
           
Sbjct: 690  498

Query: 490  549
           
Sbjct: 750  498

Query: 550  609
           
Sbjct: 810  498

Query: 610  669
           
Sbjct: 870  498

Query: 670  673
           
Sbjct: 930  498

[Close]

BLAST of MU54869 vs. TrEMBL
Match: B9RVH4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1135970 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.0e-47
Identity = 101/202 (50.00%), Postives = 135/202 (66.83%), Query Frame = 1


Query: 88  KYPMSYLQDLRKCIVEILSSIHLAKHDLLSVFAMEFQKNCIDMFQLTDNVGVASETIEQI 147
           KYPMSY Q+L KCIVEILS I+L +HDLLS F +  Q+NC ++F   +N+G  +ET+EQ+
Sbjct: 504 KYPMSYCQELGKCIVEILSGIYLMEHDLLSPFCVAIQENCFEIFLQNENIGRNTETVEQV 563

Query: 148 IGFILELEQLSMDKDDTWLLVHLVGPTLANTFPIIQSLDSSDGVRLLSAAVSVFGPRKIV 207
           I F   L Q S+ K +TW LV LVGP LA +FP+I+S+D++DG+RLLS AVS+FGPRKIV
Sbjct: 564 IKFFSLLGQHSVQKGETWPLVCLVGPLLAKSFPLIRSIDTTDGLRLLSVAVSLFGPRKIV 623

Query: 208 RELFINNNG-MSSTKFSGVEAQDLEARQFMQVFNDIFVPWCLQGNNXXXXXXXXXXXXXI 267
           RELF+ N G   S+       ++LE   FMQVF + F+ WCL G N             +
Sbjct: 624 RELFLGNEGSQCSSSLYDDRDKELEPEYFMQVFRETFILWCLAGCNSSSSARLDLLLALL 683

Query: 268 DDEHFSDQWHSVISYSTNLNHT 327
           +DE F +QW +VISY+ +   T
Sbjct: 684 NDESFPEQWSAVISYAISQGGT 705

Query: 328  387
           
Sbjct: 744  705

Query: 388  447
           
Sbjct: 804  705

Query: 448  507
           
Sbjct: 864  705

Query: 508  567
           
Sbjct: 924  705

Query: 568  627
           
Sbjct: 984  705

Query: 628  687
           
Sbjct: 1044  705

Query: 688  691
           
Sbjct: 1104  705

[Close]

BLAST of MU54869 vs. TrEMBL
Match: W9RJF7_9ROSA (E3 ubiquitin-protein ligase listerin OS=Morus notabilis GN=L484_003308 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.5e-47
Identity = 101/213 (47.42%), Postives = 139/213 (65.26%), Query Frame = 1


Query: 43  DAPLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSVFAMEFQKNCIDMFQ 102
           + PL+ K TE+    KYP+SYLQDLR CI+++LS I   +H LLS F  EF ++C+ +FQ
Sbjct: 601 ELPLSKK-TEEASRIKYPISYLQDLRSCIIDVLSGIFFLEHSLLSAFCTEFHESCLGLFQ 660

Query: 103 LTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANTFPIIQSLDSSDGVR 162
              N   A+E++E++  FI  L Q +M K ++W LV LVGP LA  FP+I+SLDS + V+
Sbjct: 661 HAPNTVTAAESVERVTQFIWLLGQHAMQKGESWPLVDLVGPMLAKYFPVIRSLDSPENVK 720

Query: 163 LLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQVFNDIFVPWCLQGNN 222
           LLS AVSVFGPR+IV ELF++N   S T    V+  +L   +FMQ+F   FVPWCL+  +
Sbjct: 721 LLSTAVSVFGPREIVGELFVHNEEHSHTPDDKVDG-ELVVDEFMQIFKTNFVPWCLRSCD 780

Query: 223 XXXXXXXXXXXXXIDDEHFSDQWHSVISYSTNL 282
                        +D+E FSDQWH+VI+Y+ NL
Sbjct: 781 QSTTARLDLLLTLLDNECFSDQWHAVITYAINL 811

Query: 283  342
           
Sbjct: 841  811

Query: 343  402
           
Sbjct: 901  811

Query: 403  462
           
Sbjct: 961  811

Query: 463  522
           
Sbjct: 1021  811

Query: 523  582
           
Sbjct: 1081  811

Query: 583  642
           
Sbjct: 1141  811

Query: 643  682
           
Sbjct: 1201  811

[Close]

BLAST of MU54869 vs. TrEMBL
Match: A0A067E2I7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043255mg PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.5e-46
Identity = 104/216 (48.15%), Postives = 141/216 (65.28%), Query Frame = 1


Query: 49  PLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSVFAMEFQKNCIDMFQLT 108
           P N K ++ L + KYP SY Q+L KCIVEILS I+L +HDLLS F   F + C+ + Q  
Sbjct: 440 PSNVKKSDTL-NMKYPKSYFQELGKCIVEILSGIYLLEHDLLSSFCTTFHETCLQVVQQK 499

Query: 109 DNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANTFPIIQSLDSSDGVRLL 168
           +N+G+ SE  EQII F+  LEQ ++ K + W LV+LVGP LA  FP+I+SLDS +G+RLL
Sbjct: 500 ENLGLFSE--EQIIKFLSLLEQHAIQKGEDWPLVYLVGPMLAKAFPMIKSLDSVNGIRLL 559

Query: 169 SAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQVFNDIFVPWCLQGNNXX 228
           S ++SVFGPRKIVRELFI ++G           Q +++  F+QVF + FVPWCL G N  
Sbjct: 560 SVSISVFGPRKIVRELFITDDG----------DQMVDSGSFLQVFKETFVPWCLDGYNHS 619

Query: 229 XXXXXXXXXXXIDDEHFSDQWHSVISYSTNLNHTEV 288
                      +D+E F DQW +V+SY+ N+ H+ V
Sbjct: 620 MSSRLDLLLTLLDEECFLDQWCAVMSYAANVKHSGV 642

Query: 289  348
           
Sbjct: 680  642

Query: 349  408
           
Sbjct: 740  642

Query: 409  468
           
Sbjct: 800  642

Query: 469  528
           
Sbjct: 860  642

Query: 529  588
           
Sbjct: 920  642

Query: 589  648
           
Sbjct: 980  642

Query: 649  697
           
Sbjct: 1040  642

[Close]

BLAST of MU54869 vs. TAIR10
Match: AT5G58410.1 (AT5G58410.1 HEAT/U-box domain-containing protein)

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-33
Identity = 77/213 (36.15%), Postives = 125/213 (58.69%), Query Frame = 1


Query: 49  PLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSVFAMEFQKNCIDMFQLT 108
           P N + + +       +SYLQ+L +CI+EILS I+L + +LLS F    Q++ ++M Q  
Sbjct: 489 PPNQRKSAENLGMGNSVSYLQELGRCILEILSGINLLEQNLLSFFCKAVQESFLNMLQQG 548

Query: 109 DNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANTFPIIQSLDSSDGVRLL 168
           D + + + ++ ++I F+L LE+ S+ + ++W L   +GP L+  FP I+S +  DGV+LL
Sbjct: 549 D-LEIVAGSMRKMIDFLLLLERYSVLEGESWPLHQFMGPLLSKAFPWIRSSELLDGVKLL 608

Query: 169 SAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQVFNDIFVPWCLQGNNXX 228
           S +VSVFGPRK+V  L   ++  +ST  S  + +++   + ++VF +IF+PWC+ G +  
Sbjct: 609 SVSVSVFGPRKVVPVLI--DDIETSTLLSVEKEKNMSPEKLIKVFQEIFIPWCMDGYDSS 668

Query: 229 XXXXXXXXXXXIDDEHFSDQWHSVISYSTNLNH 288
                      +DDE F+ QW  VISY  N  H
Sbjct: 669 TAARQDLLFSLLDDECFTQQWSDVISYVFNQQH 698

Query: 289  348
           
Sbjct: 729  698

Query: 349  408
           
Sbjct: 789  698

Query: 409  468
           
Sbjct: 849  698

Query: 469  528
           
Sbjct: 909  698

Query: 529  588
           
Sbjct: 969  698

Query: 589  648
           
Sbjct: 1029  698

Query: 649  688
           
Sbjct: 1089  698

[Close]

BLAST of MU54869 vs. NCBI nr
Match: gi|659114943|ref|XP_008457305.1| (PREDICTED: E3 ubiquitin-protein ligase listerin isoform X1 [Cucumis melo])

HSP 1 Score: 439.1 bits (1128), Expect = 4.8e-120
Identity = 220/235 (93.62%), Postives = 220/235 (93.62%), Query Frame = 1


Query: 1   HVQCLKNQDRVFFEDAPLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSV 60
           HVQCLKNQDRVF EDAPLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSV
Sbjct: 472 HVQCLKNQDRVFSEDAPLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSV 531

Query: 61  FAMEFQKNCIDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT 120
           FAMEFQKNCIDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT
Sbjct: 532 FAMEFQKNCIDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT 591

Query: 121 FPIIQSLDSSDGVRLLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQV 180
           FPIIQSLDS DGVRLLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQV
Sbjct: 592 FPIIQSLDSLDGVRLLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQV 651

Query: 181 FNDIFVPWCLQGNNXXXXXXXXXXXXXIDDEHFSDQWHSVISYSTNLNHTEVVLE 240
           FNDIFVPWCLQGNN             IDDEHFSDQWHSVISYSTNLNHTEVVLE
Sbjct: 652 FNDIFVPWCLQGNNSSSSAQLDLLLALIDDEHFSDQWHSVISYSTNLNHTEVVLE 706

Query: 241  300
           
Sbjct: 712  706

Query: 301  360
           
Sbjct: 772  706

Query: 361  420
           
Sbjct: 832  706

Query: 421  480
           
Sbjct: 892  706

Query: 481  540
           
Sbjct: 952  706

Query: 541  600
           
Sbjct: 1012  706

Query: 601  660
           
Sbjct: 1072  706

Query: 661  706
           
Sbjct: 1132  706

[Close]

BLAST of MU54869 vs. NCBI nr
Match: gi|659114945|ref|XP_008457306.1| (PREDICTED: E3 ubiquitin-protein ligase listerin isoform X2 [Cucumis melo])

HSP 1 Score: 439.1 bits (1128), Expect = 4.8e-120
Identity = 220/235 (93.62%), Postives = 220/235 (93.62%), Query Frame = 1


Query: 1   HVQCLKNQDRVFFEDAPLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSV 60
           HVQCLKNQDRVF EDAPLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSV
Sbjct: 359 HVQCLKNQDRVFSEDAPLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSV 418

Query: 61  FAMEFQKNCIDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT 120
           FAMEFQKNCIDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT
Sbjct: 419 FAMEFQKNCIDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT 478

Query: 121 FPIIQSLDSSDGVRLLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQV 180
           FPIIQSLDS DGVRLLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQV
Sbjct: 479 FPIIQSLDSLDGVRLLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQV 538

Query: 181 FNDIFVPWCLQGNNXXXXXXXXXXXXXIDDEHFSDQWHSVISYSTNLNHTEVVLE 240
           FNDIFVPWCLQGNN             IDDEHFSDQWHSVISYSTNLNHTEVVLE
Sbjct: 539 FNDIFVPWCLQGNNSSSSAQLDLLLALIDDEHFSDQWHSVISYSTNLNHTEVVLE 593

Query: 241  300
           
Sbjct: 599  593

Query: 301  360
           
Sbjct: 659  593

Query: 361  420
           
Sbjct: 719  593

Query: 421  480
           
Sbjct: 779  593

Query: 481  540
           
Sbjct: 839  593

Query: 541  600
           
Sbjct: 899  593

Query: 601  660
           
Sbjct: 959  593

Query: 661  706
           
Sbjct: 1019  593

[Close]

BLAST of MU54869 vs. NCBI nr
Match: gi|778661862|ref|XP_011658879.1| (PREDICTED: E3 ubiquitin-protein ligase listerin isoform X2 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 8.5e-117
Identity = 211/235 (89.79%), Postives = 218/235 (92.77%), Query Frame = 1


Query: 1   HVQCLKNQDRVFFEDAPLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSV 60
           HVQCLKNQDRVF ED PLNNKM ED+PSTKYPMSYLQDLRKCIVEILSSIHL KHDLLSV
Sbjct: 359 HVQCLKNQDRVFSEDEPLNNKMIEDIPSTKYPMSYLQDLRKCIVEILSSIHLVKHDLLSV 418

Query: 61  FAMEFQKNCIDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT 120
           FAMEFQKNC+DMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT
Sbjct: 419 FAMEFQKNCLDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT 478

Query: 121 FPIIQSLDSSDGVRLLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQV 180
           FPIIQSLDSSDGVRLLSAAVSVFGPRKIV+ELFINNNGMSST+FSGVEAQDLEARQFMQV
Sbjct: 479 FPIIQSLDSSDGVRLLSAAVSVFGPRKIVQELFINNNGMSSTEFSGVEAQDLEARQFMQV 538

Query: 181 FNDIFVPWCLQGNNXXXXXXXXXXXXXIDDEHFSDQWHSVISYSTNLNHTEVVLE 240
           FND+FVPWCLQGNN             IDDEHFSDQWHS+ISYSTNL+HTEVVLE
Sbjct: 539 FNDVFVPWCLQGNNSSSSARLDLLLALIDDEHFSDQWHSIISYSTNLDHTEVVLE 593

Query: 241  300
           
Sbjct: 599  593

Query: 301  360
           
Sbjct: 659  593

Query: 361  420
           
Sbjct: 719  593

Query: 421  480
           
Sbjct: 779  593

Query: 481  540
           
Sbjct: 839  593

Query: 541  600
           
Sbjct: 899  593

Query: 601  660
           
Sbjct: 959  593

Query: 661  706
           
Sbjct: 1019  593

[Close]

BLAST of MU54869 vs. NCBI nr
Match: gi|778661859|ref|XP_011658874.1| (PREDICTED: E3 ubiquitin-protein ligase listerin isoform X1 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 8.5e-117
Identity = 211/235 (89.79%), Postives = 218/235 (92.77%), Query Frame = 1


Query: 1   HVQCLKNQDRVFFEDAPLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKHDLLSV 60
           HVQCLKNQDRVF ED PLNNKM ED+PSTKYPMSYLQDLRKCIVEILSSIHL KHDLLSV
Sbjct: 472 HVQCLKNQDRVFSEDEPLNNKMIEDIPSTKYPMSYLQDLRKCIVEILSSIHLVKHDLLSV 531

Query: 61  FAMEFQKNCIDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT 120
           FAMEFQKNC+DMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT
Sbjct: 532 FAMEFQKNCLDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGPTLANT 591

Query: 121 FPIIQSLDSSDGVRLLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEARQFMQV 180
           FPIIQSLDSSDGVRLLSAAVSVFGPRKIV+ELFINNNGMSST+FSGVEAQDLEARQFMQV
Sbjct: 592 FPIIQSLDSSDGVRLLSAAVSVFGPRKIVQELFINNNGMSSTEFSGVEAQDLEARQFMQV 651

Query: 181 FNDIFVPWCLQGNNXXXXXXXXXXXXXIDDEHFSDQWHSVISYSTNLNHTEVVLE 240
           FND+FVPWCLQGNN             IDDEHFSDQWHS+ISYSTNL+HTEVVLE
Sbjct: 652 FNDVFVPWCLQGNNSSSSARLDLLLALIDDEHFSDQWHSIISYSTNLDHTEVVLE 706

Query: 241  300
           
Sbjct: 712  706

Query: 301  360
           
Sbjct: 772  706

Query: 361  420
           
Sbjct: 832  706

Query: 421  480
           
Sbjct: 892  706

Query: 481  540
           
Sbjct: 952  706

Query: 541  600
           
Sbjct: 1012  706

Query: 601  660
           
Sbjct: 1072  706

Query: 661  706
           
Sbjct: 1132  706

[Close]

BLAST of MU54869 vs. NCBI nr
Match: gi|643722901|gb|KDP32598.1| (hypothetical protein JCGZ_13148 [Jatropha curcas])

HSP 1 Score: 222.2 bits (565), Expect = 9.3e-55
Identity = 115/229 (50.22%), Postives = 150/229 (65.50%), Query Frame = 1


Query: 10  CLKNQDRV---FFED-----APLNNKMTEDLPSTKYPMSYLQDLRKCIVEILSSIHLAKH 69
           C KNQ        ED       ++N+ T +L + KYPM+YLQ+  KCIVEILS I+L + 
Sbjct: 270 CFKNQSSASNGISEDLSEKTCAISNQRTAELLTIKYPMNYLQESGKCIVEILSGIYLIER 329

Query: 70  DLLSVFAMEFQKNCIDMFQLTDNVGVASETIEQIIGFILELEQLSMDKDDTWLLVHLVGP 129
           DLLS F + FQ+NC+ MFQL D+ G  +E +EQ+I F+L LE+ S+ KD+TW LV+LVGP
Sbjct: 330 DLLSTFCVAFQENCLKMFQLKDSTGRNTENVEQVIKFMLLLEEHSVRKDETWPLVYLVGP 389

Query: 130 TLANTFPIIQSLDSSDGVRLLSAAVSVFGPRKIVRELFINNNGMSSTKFSGVEAQDLEAR 189
            LA  FP I+SLDS DG+RLLS AVS+FGPRKIV+ELF  N G  S   S    ++LE  
Sbjct: 390 MLAKCFPSIRSLDSPDGLRLLSVAVSLFGPRKIVKELFFYNEGHCSFPLSDDNEKELEPE 449

Query: 190 QFMQVFNDIFVPWCLQGNNXXXXXXXXXXXXXIDDEHFSDQWHSVISYS 249
            FMQVF + FVPWC  G +             +DDEHFS+QW +++SY+
Sbjct: 450 YFMQVFKETFVPWCFVGCDSSSNARIDLLLAFLDDEHFSEQWTAILSYA 498

Query: 250  309
           
Sbjct: 510  498

Query: 310  369
           
Sbjct: 570  498

Query: 370  429
           
Sbjct: 630  498

Query: 430  489
           
Sbjct: 690  498

Query: 490  549
           
Sbjct: 750  498

Query: 550  609
           
Sbjct: 810  498

Query: 610  669
           
Sbjct: 870  498

Query: 670  673
           
Sbjct: 930  498

The following BLAST results are available for this feature:

BLAST of MU54869 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LTN1_ARATH	6.5e-32	36.15	E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana GN=At5g58410 PE=3 S...	[more]

BLAST of MU54869 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXT2_CUCSA	1.3e-116	89.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533710 PE=4 SV=1	[more]
A0A067KC49_JATCU	1.4e-54	50.22	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13148 PE=4 SV=1	[more]
B9RVH4_RICCO	1.0e-47	50.00	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1135970 PE=4 SV=1	[more]
W9RJF7_9ROSA	6.5e-47	47.42	E3 ubiquitin-protein ligase listerin OS=Morus notabilis GN=L484_003308 PE=4 SV=1	[more]
A0A067E2I7_CITSI	2.5e-46	48.15	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043255mg PE=4 SV=1	[more]

BLAST of MU54869 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58410.1	3.6e-33	36.15	HEAT/U-box domain-containing protein	[more]

BLAST of MU54869 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114943\|ref\|XP_008457305.1\|	4.8e-120	93.62	PREDICTED: E3 ubiquitin-protein ligase listerin isoform X1 [Cucumis melo]	[more]
gi\|659114945\|ref\|XP_008457306.1\|	4.8e-120	93.62	PREDICTED: E3 ubiquitin-protein ligase listerin isoform X2 [Cucumis melo]	[more]
gi\|778661862\|ref\|XP_011658879.1\|	8.5e-117	89.79	PREDICTED: E3 ubiquitin-protein ligase listerin isoform X2 [Cucumis sativus]	[more]
gi\|778661859\|ref\|XP_011658874.1\|	8.5e-117	89.79	PREDICTED: E3 ubiquitin-protein ligase listerin isoform X1 [Cucumis sativus]	[more]
gi\|643722901\|gb\|KDP32598.1\|	9.3e-55	50.22	hypothetical protein JCGZ_13148 [Jatropha curcas]	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C020495	MELO3C020495	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
15D04B09	15D04B09	EST