MU54273 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU54273
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Protein AATF
Location	chr6 : 332696 .. 335530 (+)
Sequence length	813

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CACGCCCACACCCTCCGCTCGCCTCGCGTACAGTCGCCCCGCCCCGTCTTCTTCAATCTTCAGTTCAGCTTCCTCCCCGCCGGCCGCATACCTCTTCGCTTGCCCTTCAAGCCGAACGCCCCCCTCTCCGCCGGTGTCCAGTTGCTCGCCCTTCAAGCCAGCCGCCCCCTCTCTGACACTGTCCAGTCGTCGTCCTTCAGAATTTTGTCCGCCCTCCCTGTCGTCCGCCTTCCCGCTAGCACTTTGGATTTGGTGTTGAATTTTTTTTCTGCTTACACTTTGCTTCCAGTTGATAGACCTGTTTGTTTAGGTTTAACAAACTAGTAAATTTGTCCAACAAGTCCTCTGGACTTCATCCCATAAGATGGGGTCGGCATCAAAAAGGGAGAGAAAATTACAAGCCATTGGTAGTGGGTCTGAAGATTTTGAAGACATTGATGATTTTGAACTTCCTGTTGAGGAAGAGGAATACTTTAGCGACGAAGATGACAATTCAGGGAATGAGGAAGAAGAAGTCGAAGATGATGAAGATGAGGATGAGGATGAACAGCAATTAGAAGAGGAAGATGGAGGGGAGGAGGACCGTAAAGATGCTGAGATGGAGGAACTTGAGAAAGAATATATGGATCTTCGTCACCAGGAGCAAGACATTTTGAAGAATTTGAGGCAACATAAGGATGAGGATTTTCTTAAGGGTCAAGCAGTGAAGAATCAAAGGGCTTTGTGGGACAAAAGTCTGGAGCTTAGATTTTTGCTTCAAAAGGCATTCTCCAACTCAAATAGATTGCCAAAGGGATCAATTAAGTCCTCATT

Library


Library category	ESTs
melon CM-Dea library	2
melon CM-TEa library	3

Homology

[Close]

BLAST of MU54273 vs. TrEMBL
Match: A0A067EU68_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041037mg PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-28
Identity = 74/149 (49.66%), Postives = 91/149 (61.07%), Query Frame = 2


Query: 365 MGSASKRERKLQAIGSGSEDFEDIDDFELPVEEEEYFXXXXXXXXXXXXXXXXXXXXXXX 424
           MGS+SKR R  +   S SED  D ++ ++ V+ EE                         
Sbjct: 1   MGSSSKRARNAKESDSYSEDLSDFENDQMTVDSEE-----EEEESDGVELEDGDEEEGSS 60

Query: 425 XXXXXXXXXXXXXRKDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKNQRAL 484
                         +D EMEELEKEYMDLRHQEQDILKN+++HKDED LKGQAV NQ+AL
Sbjct: 61  DDEEQEAKENEDGGEDDEMEELEKEYMDLRHQEQDILKNIKRHKDEDILKGQAVNNQKAL 120

Query: 485 WDKSLELRFLLQKAFSNSNRLPKGSIKSS 544
           WDK+LE RFLLQKAFS+SNRLP+  ++SS
Sbjct: 121 WDKTLEFRFLLQKAFSSSNRLPQEPVRSS 144

Query: 545  604
           
Sbjct: 181  144

Query: 605  664
           
Sbjct: 241  144

Query: 665  724
           
Sbjct: 301  144

Query: 725  784
           
Sbjct: 361  144

Query: 785  812
           
Sbjct: 421  144

[Close]

BLAST of MU54273 vs. TrEMBL
Match: V4W121_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015475mg PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-27
Identity = 73/149 (48.99%), Postives = 90/149 (60.40%), Query Frame = 2


Query: 365 MGSASKRERKLQAIGSGSEDFEDIDDFELPVEEEEYFXXXXXXXXXXXXXXXXXXXXXXX 424
           MGS+SKR R  +   S SED  D ++ ++ V+ EE                         
Sbjct: 1   MGSSSKRARNAKESDSYSEDSSDFENDQMTVDSEE-----EEEESDGVELEDGDEEEGSS 60

Query: 425 XXXXXXXXXXXXXRKDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKNQRAL 484
                         +D EMEELEKEYMDL HQEQDILKN+++HKDED LKGQAV NQ+AL
Sbjct: 61  DDEEQEARENEDGGEDDEMEELEKEYMDLHHQEQDILKNIKRHKDEDILKGQAVNNQKAL 120

Query: 485 WDKSLELRFLLQKAFSNSNRLPKGSIKSS 544
           WDK+LE RFLLQKAFS+SNRLP+  ++SS
Sbjct: 121 WDKTLEFRFLLQKAFSSSNRLPQEPVRSS 144

Query: 545  604
           
Sbjct: 181  144

Query: 605  664
           
Sbjct: 241  144

Query: 665  724
           
Sbjct: 301  144

Query: 725  784
           
Sbjct: 361  144

Query: 785  812
           
Sbjct: 421  144

[Close]

BLAST of MU54273 vs. TrEMBL
Match: A0A059BZG3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04452 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.8e-27
Identity = 70/153 (45.75%), Postives = 95/153 (62.09%), Query Frame = 2


Query: 365 MGSASKRERKLQAIGSGSEDFED----IDDFELPVEEEEYFXXXXXXXXXXXXXXXXXXX 424
           MG++SKR RK++++     D ED    +++    ++ EE                     
Sbjct: 1   MGTSSKRARKVRSVSEDGSDLEDGKPLVEEMNSDLDVEEGDSGMDDGSDEEEEEDEEEVS 60

Query: 425 XXXXXXXXXXXXXXXXXRKDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKN 484
                            R D EM+ELEKEYMDL++QEQDILKNL++HKDED LKG+AV+N
Sbjct: 61  DEDEDASSGDEEGQIHGRADDEMKELEKEYMDLQNQEQDILKNLKRHKDEDLLKGEAVQN 120

Query: 485 QRALWDKSLELRFLLQKAFSNSNRLPKGSIKSS 544
           Q+ALWDK+LELRFLLQKAFS+SNRLP+ S++S+
Sbjct: 121 QKALWDKTLELRFLLQKAFSSSNRLPQESVRST 153

Query: 545  604
           
Sbjct: 181  153

Query: 605  664
           
Sbjct: 241  153

Query: 665  724
           
Sbjct: 301  153

Query: 725  784
           
Sbjct: 361  153

Query: 785  812
           
Sbjct: 421  153

[Close]

BLAST of MU54273 vs. TrEMBL
Match: K4AYY8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.8e-27
Identity = 62/75 (82.67%), Postives = 71/75 (94.67%), Query Frame = 2


Query: 587 KDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKNQRALWDKSLELRFLLQKA 646
           K+AEMEELEKEYM+LRH+EQD+LKNL QHKDED LKGQAVKNQ+ALWDK+LELRFLLQKA
Sbjct: 60  KNAEMEELEKEYMELRHKEQDLLKNLTQHKDEDLLKGQAVKNQKALWDKTLELRFLLQKA 119

Query: 647 FSNSNRLPKGSIKSS 706
           FSN+NRLP+  I+SS
Sbjct: 120 FSNANRLPQEPIRSS 134

Query: 707  766
           
Sbjct: 180  134

Query: 767  812
           
Sbjct: 240  134

[Close]

BLAST of MU54273 vs. TrEMBL
Match: A0A0V0I4U9_SOLCH (Uncharacterized protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.2e-26
Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 2


Query: 587 KDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKNQRALWDKSLELRFLLQKA 646
           K AEMEELEKEYM+LRH+EQD+LKNL QHKDED LKGQAVKNQ+ALWDK+LELRFLLQK 
Sbjct: 94  KIAEMEELEKEYMELRHKEQDLLKNLTQHKDEDLLKGQAVKNQKALWDKTLELRFLLQKP 153

Query: 647 FSNSNRLPKGSIKSS 706
           FSN+NRLP+  I+SS
Sbjct: 154 FSNANRLPQEPIRSS 168

Query: 707  766
           
Sbjct: 214  168

Query: 767  812
           
Sbjct: 274  168

[Close]

BLAST of MU54273 vs. NCBI nr
Match: gi|659074823|ref|XP_008437816.1| (PREDICTED: putative uncharacterized protein DDB_G0270496 [Cucumis melo])

HSP 1 Score: 196.1 bits (497), Expect = 8.2e-47
Identity = 110/149 (73.83%), Postives = 110/149 (73.83%), Query Frame = 2


Query: 365 MGSASKRERKLQAIGSGSEDFEDIDDFELPVEEEEYFXXXXXXXXXXXXXXXXXXXXXXX 424
           MGSASKRERKLQAIGSGSEDFEDIDDFELPVEEEEY                        
Sbjct: 1   MGSASKRERKLQAIGSGSEDFEDIDDFELPVEEEEYLSDEDDNSGNEEEEVEDDEDEDED 60

Query: 425 XXXXXXXXXXXXXRKDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKNQRAL 484
                        RKDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKNQRAL
Sbjct: 61  EEQLEEEDGGEEDRKDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKNQRAL 120

Query: 485 WDKSLELRFLLQKAFSNSNRLPKGSIKSS 544
           WDKSLELRFLLQKAFSNSNRLPK  IKSS
Sbjct: 121 WDKSLELRFLLQKAFSNSNRLPKEPIKSS 149

Query: 545  604
           
Sbjct: 181  149

Query: 605  664
           
Sbjct: 241  149

Query: 665  724
           
Sbjct: 301  149

Query: 725  784
           
Sbjct: 361  149

Query: 785  812
           
Sbjct: 421  149

[Close]

BLAST of MU54273 vs. NCBI nr
Match: gi|778676716|ref|XP_011650649.1| (PREDICTED: putative uncharacterized protein DDB_G0270496 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 4.5e-45
Identity = 107/149 (71.81%), Postives = 109/149 (73.15%), Query Frame = 2


Query: 365 MGSASKRERKLQAIGSGSEDFEDIDDFELPVEEEEYFXXXXXXXXXXXXXXXXXXXXXXX 424
           MGSASK+ERKLQAI SGSEDFEDIDDFELPVEEEEY                        
Sbjct: 1   MGSASKKERKLQAIDSGSEDFEDIDDFELPVEEEEYSSDEDDNSENEEEEVEDEEDEDED 60

Query: 425 XXXXXXXXXXXXXRKDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKNQRAL 484
                        RKDAEMEELEKEYMDLRHQEQDILKNL+QHKDEDFLKGQAVKNQRAL
Sbjct: 61  EEQLEEEDGGEEDRKDAEMEELEKEYMDLRHQEQDILKNLKQHKDEDFLKGQAVKNQRAL 120

Query: 485 WDKSLELRFLLQKAFSNSNRLPKGSIKSS 544
           WDKSLELRFLLQKAFSNSNRLPK  IKSS
Sbjct: 121 WDKSLELRFLLQKAFSNSNRLPKEPIKSS 149

Query: 545  604
           
Sbjct: 181  149

Query: 605  664
           
Sbjct: 241  149

Query: 665  724
           
Sbjct: 301  149

Query: 725  784
           
Sbjct: 361  149

Query: 785  812
           
Sbjct: 421  149

[Close]

BLAST of MU54273 vs. NCBI nr
Match: gi|658054838|ref|XP_008363179.1| (PREDICTED: protein AATF-like [Malus domestica])

HSP 1 Score: 125.6 bits (314), Expect = 1.4e-25
Identity = 62/74 (83.78%), Postives = 70/74 (94.59%), Query Frame = 2


Query: 587 KDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKNQRALWDKSLELRFLLQKA 646
           KDAEMEELEKEYM+LRHQEQDILKNL++HKDED LKGQAVKNQ+ALWDK+LE RFLLQKA
Sbjct: 68  KDAEMEELEKEYMNLRHQEQDILKNLKRHKDEDLLKGQAVKNQKALWDKALEFRFLLQKA 127

Query: 647 FSNSNRLPKGSIKS 706
           FSNSNRLP+  ++S
Sbjct: 128 FSNSNRLPQEPVRS 141

Query: 707  766
           
Sbjct: 188  141

Query: 767  809
           
Sbjct: 248  141

[Close]

BLAST of MU54273 vs. NCBI nr
Match: gi|641835785|gb|KDO54757.1| (hypothetical protein CISIN_1g041037mg [Citrus sinensis])

HSP 1 Score: 125.2 bits (313), Expect = 1.8e-25
Identity = 74/149 (49.66%), Postives = 91/149 (61.07%), Query Frame = 2


Query: 365 MGSASKRERKLQAIGSGSEDFEDIDDFELPVEEEEYFXXXXXXXXXXXXXXXXXXXXXXX 424
           MGS+SKR R  +   S SED  D ++ ++ V+ EE                         
Sbjct: 1   MGSSSKRARNAKESDSYSEDLSDFENDQMTVDSEE-----EEEESDGVELEDGDEEEGSS 60

Query: 425 XXXXXXXXXXXXXRKDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKNQRAL 484
                         +D EMEELEKEYMDLRHQEQDILKN+++HKDED LKGQAV NQ+AL
Sbjct: 61  DDEEQEAKENEDGGEDDEMEELEKEYMDLRHQEQDILKNIKRHKDEDILKGQAVNNQKAL 120

Query: 485 WDKSLELRFLLQKAFSNSNRLPKGSIKSS 544
           WDK+LE RFLLQKAFS+SNRLP+  ++SS
Sbjct: 121 WDKTLEFRFLLQKAFSSSNRLPQEPVRSS 144

Query: 545  604
           
Sbjct: 181  144

Query: 605  664
           
Sbjct: 241  144

Query: 665  724
           
Sbjct: 301  144

Query: 725  784
           
Sbjct: 361  144

Query: 785  812
           
Sbjct: 421  144

[Close]

BLAST of MU54273 vs. NCBI nr
Match: gi|694328481|ref|XP_009355045.1| (PREDICTED: LOW QUALITY PROTEIN: protein AATF-like [Pyrus x bretschneideri])

HSP 1 Score: 125.2 bits (313), Expect = 1.8e-25
Identity = 62/74 (83.78%), Postives = 69/74 (93.24%), Query Frame = 2


Query: 587 KDAEMEELEKEYMDLRHQEQDILKNLRQHKDEDFLKGQAVKNQRALWDKSLELRFLLQKA 646
           KDAEMEELEKEYM+LRHQEQDILKNL+ HKDED LKGQAVKNQ+ALWDK+LE RFLLQKA
Sbjct: 37  KDAEMEELEKEYMNLRHQEQDILKNLKHHKDEDLLKGQAVKNQKALWDKALEFRFLLQKA 96

Query: 647 FSNSNRLPKGSIKS 706
           FSNSNRLP+  ++S
Sbjct: 97  FSNSNRLPQEPVRS 110

Query: 707  766
           
Sbjct: 157  110

Query: 767  809
           
Sbjct: 217  110

The following BLAST results are available for this feature:

BLAST of MU54273 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067EU68_CITSI	2.7e-28	49.66	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041037mg PE=4 SV=1	[more]
V4W121_9ROSI	1.7e-27	48.99	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015475mg PE=4 SV=1	[more]
A0A059BZG3_EUCGR	3.8e-27	45.75	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04452 PE=4 SV=1	[more]
K4AYY8_SOLLC	3.8e-27	82.67	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A0V0I4U9_SOLCH	4.2e-26	81.33	Uncharacterized protein OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of MU54273 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074823\|ref\|XP_008437816.1\|	8.2e-47	73.83	PREDICTED: putative uncharacterized protein DDB_G0270496 [Cucumis melo]	[more]
gi\|778676716\|ref\|XP_011650649.1\|	4.5e-45	71.81	PREDICTED: putative uncharacterized protein DDB_G0270496 [Cucumis sativus]	[more]
gi\|658054838\|ref\|XP_008363179.1\|	1.4e-25	83.78	PREDICTED: protein AATF-like [Malus domestica]	[more]
gi\|641835785\|gb\|KDO54757.1\|	1.8e-25	49.66	hypothetical protein CISIN_1g041037mg [Citrus sinensis]	[more]
gi\|694328481\|ref\|XP_009355045.1\|	1.8e-25	83.78	PREDICTED: LOW QUALITY PROTEIN: protein AATF-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR025160	AATF

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C005976	MELO3C005976	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
DEa0004P16	DEa0004P16	EST
DEa0012C18	DEa0012C18	EST
TEa0010O07	TEa0010O07	EST
TEa0013O04	TEa0013O04	EST
TEa0016O08	TEa0016O08	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025160	AATF leucine zipper-containing domain	PFAM	PF13339	AATF-Che1	coord: 107..145 score: 3.0
None	No IPR available	unknown	Coil	Coil	coord: 72..99 scor
None	No IPR available	PANTHER	PTHR15565	AATF PROTEIN APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR	coord: 16..148 score: 5.1
None	No IPR available	PANTHER	PTHR15565:SF0	PROTEIN AATF	coord: 16..148 score: 5.1