MU54011 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU54011
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pentatricopeptide repeat-containing protein family
Location	chr2 : 7334182 .. 7339384 (+)
Sequence length	891

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GACAAGCTGCATAAACCCCGCCCACTCTCACAAGCTGTACAAAGAGAGAAAAACTCCGGTCCTCTATTGCTTCAAGGTTCCTTCACAATTTTGATGCTTCGTCTTGCTCCAAATCTTCTTCGCAAAATCTCAAGCAGCCCCGTTTCCTCAACCCCTTTCCATCGTTTTTCCCTTTCCACATTTCTCAACCTCGATCTGTTGCAGCAACAGTTGCTGTTACGCTTCATCGCTGGCTCTGCTTCGAGCCCTAGCCTCTCAATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTCTGATTGTAGTCAAAGAACTCAATAGACTTCAGTCCAATTTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGACCTTGTTGCGGTTCTTGTTGAGCTTCAGAGACAGAATCATGTCTTTCTCTGCATGAAATTGTATAACGTGGTTCGTAAAGAAGTATGGTACCGGCCCGACATGTTCTTTTATAGAGATATGCTGATGATGCTTGCAAAGAACAAAAGGGTAGAAAAACAAAACAGGTTTGGGAGGATCTGAAAAAAGAGGGTGTGTTATTTGATCAGCATACTTTTGGAGACATTATTCGAGCATACTTGGATAATGCAATGCTCTCTGAGGCCATGGATATCTATCGTGAAATGAGAGAATCTCCTGATAGGCCATTATCTTTGCCTTTTCGTGTCATTCTTAAGGGCCTTATTCCATATCCAGAATTGAGAGAACAAGTTAAAGATGACTTCTTGGAGCTCTTCCCTGATATGATCGTCTATGATCCACCAGAAGACTTGTTTGAAGAAGATGAAGATAGAAACAAGAGTGAAGATGATTAACTAATTAAGAATGCTGCTCTTGCAATTG

Library


Library category	ESTs
melon AI library	2
melon PS library	2

Homology

[Close]

BLAST of MU54011 vs. Swiss-Prot
Match: PPR89_ARATH (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana GN=At1g62350 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.1e-35
Identity = 71/93 (76.34%), Postives = 81/93 (87.10%), Query Frame = 3


Query: 525 KEQKGRKTKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSL 584
           + +K  +TK+VWEDLKKE VLFDQHTFGD++R +LDN +  EAM +Y EMRESPDRPLSL
Sbjct: 83  RNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNELPLEAMRLYGEMRESPDRPLSL 142

Query: 585 PFRVILKGLIPYPELREQVKDDFLELFPDMIVY 644
           PFRVILKGL+PYPELRE+VKDDFLELFP MIVY
Sbjct: 143 PFRVILKGLVPYPELREKVKDDFLELFPGMIVY 175

Query: 645  704
           
Sbjct: 203  175

Query: 705  764
           
Sbjct: 263  175

Query: 765  804
           
Sbjct: 323  175

HSP 2 Score: 146.4 bits (368), Expect = 5.1e-34
Identity = 69/92 (75.00%), Postives = 77/92 (83.70%), Query Frame = 1


Query: 280 MGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNV 339
           M KEGLI  KEL RLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQN VFLCMKLY V
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 340 VRKEVWYRPDMFFYRDMLMMLAKNKRVEKQNR 399
           VR+E+WYRPDMFFYRDMLMMLA+NK+V++  +
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKK 92

Query: 400  459
           
Sbjct: 121  92

Query: 460  519
           
Sbjct: 181  92

Query: 520  556
           
Sbjct: 241  92

[Close]

BLAST of MU54011 vs. Swiss-Prot
Match: PP266_ARATH (Pentatricopeptide repeat-containing protein At3g46870 OS=Arabidopsis thaliana GN=At3g46870 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.9e-21
Identity = 49/109 (44.95%), Postives = 75/109 (68.81%), Query Frame = 1


Query: 220 RFIAGSASSPSLSIWRRKKEMGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVA 279
           RF  G    P   +WR KK +GKE L V+  L RL+ +  +LD+FI +HV RLLK D++A
Sbjct: 56  RFHDGRPRGP---LWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLA 115

Query: 280 VLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEK 339
           V+ EL+RQ    L +K++ V++K+ WY+PD+F Y+D+++ LAK+KR+++
Sbjct: 116 VIGELERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDE 161

Query: 340  399
           
Sbjct: 176  161

Query: 400  459
           
Sbjct: 236  161

Query: 460  519
           
Sbjct: 296  161

Query: 520  547
           
Sbjct: 356  161

HSP 2 Score: 90.9 bits (224), Expect = 2.5e-17
Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 3


Query: 525 KEQKGRKTKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSL 584
           K ++  +   +WE +KKE +  D  T+ ++IR +L +   ++AM++Y +M +SPD P  L
Sbjct: 155 KSKRMDEAMALWEKMKKENLFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEEL 214

Query: 585 PFRVILKGLIPYPELREQVKDDFLELFPDMIVY 644
           PFRV+LKGL+P+P LR +VK DF ELFP+   Y
Sbjct: 215 PFRVLLKGLLPHPLLRNKVKKDFEELFPEKHAY 247

Query: 645  704
           
Sbjct: 275  247

Query: 705  764
           
Sbjct: 335  247

Query: 765  804
           
Sbjct: 395  247

[Close]

BLAST of MU54011 vs. TrEMBL
Match: A0A0A0LXS9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629100 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.7e-47
Identity = 103/118 (87.29%), Postives = 104/118 (88.14%), Query Frame = 1


Query: 94  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFXXXXXXXXXXXXRFIAGSASSPSLSIWRRK 153
           MLRLAPNLLRKISSSP+SSTPFHRFSLSTF            RFI GSASSPSLSIWRRK
Sbjct: 1   MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRK 60

Query: 154 KEMGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMK 213
           KEMGKEGLIVVKEL RLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMK
Sbjct: 61  KEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMK 118

Query: 214  273
           
Sbjct: 121  118

Query: 274  333
           
Sbjct: 181  118

Query: 334  393
           
Sbjct: 241  118

Query: 394  448
           
Sbjct: 301  118

[Close]

BLAST of MU54011 vs. TrEMBL
Match: A0A0A0LZW3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629110 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.7e-44
Identity = 93/112 (83.04%), Postives = 96/112 (85.71%), Query Frame = 3


Query: 525 KEQKGRKTKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSL 584
           K ++  +TKQVWEDLKKEGVLFDQHTFGDIIRAYLDN MLSEAMDIYREMRESPDRPLSL
Sbjct: 13  KNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSL 72

Query: 585 PFRVILKGLIPYPELREQVKDDFLELFPDMIVYXXXXXXXXXXXXRNKSEDD 644
           PFRVILKGLIPYPELREQVKDDFLELFPDMIVY            RNKSEDD
Sbjct: 73  PFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD 124

Query: 645  704
           
Sbjct: 133  124

Query: 705  764
           
Sbjct: 193  124

Query: 765  824
           
Sbjct: 253  124

Query: 825  861
           
Sbjct: 313  124

[Close]

BLAST of MU54011 vs. TrEMBL
Match: A0A0A0LZW3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629110 PE=4 SV=1)

HSP 1 Score: 40.4 bits (93), Expect = 4.4e+00
Identity = 18/19 (94.74%), Postives = 19/19 (100.00%), Query Frame = 1


Query: 490 MFFYRDMLMMLAKNKRVEK 547
           MFFYRDMLMMLAKNKRVE+
Sbjct: 1   MFFYRDMLMMLAKNKRVEE 19

HSP 2 Score: 179.5 bits (454), Expect = 6.1e-42
Identity = 84/111 (75.68%), Postives = 99/111 (89.19%), Query Frame = 1


Query: 223 FIAGSASSPSLSIWRRKKEMGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVAV 282
           +++G ASSPSLSIWRRKKEM KEGLI  KEL RLQ+  +RLDRFI+SHVSRLLKSDLV+V
Sbjct: 34  YLSGPASSPSLSIWRRKKEMSKEGLIAAKELKRLQTKLVRLDRFIASHVSRLLKSDLVSV 93

Query: 283 LVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEKQNR 342
           L E QRQ+ VFLCMKLY VVR+E+WYRPDMFFYRDMLMMLA+N+RV++ N+
Sbjct: 94  LAEFQRQDQVFLCMKLYEVVRREIWYRPDMFFYRDMLMMLARNRRVDETNK 144

Query: 343  402
           
Sbjct: 154  144

Query: 403  462
           
Sbjct: 214  144

Query: 463  522
           
Sbjct: 274  144

Query: 523  556
           
Sbjct: 334  144

[Close]

BLAST of MU54011 vs. TrEMBL
Match: A0A078DWB1_BRANA (BnaA06g04430D protein OS=Brassica napus GN=BnaA06g04430D PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.8e-31
Identity = 65/87 (74.71%), Postives = 78/87 (89.66%), Query Frame = 3


Query: 543 KTKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVIL 602
           +T +VW DLK+EGVLFDQHTFGD++RA+LDN +  EAM +Y EMR+SPD PLSLPFRV+L
Sbjct: 141 ETNKVWGDLKREGVLFDQHTFGDLVRAFLDNELPVEAMRLYGEMRDSPDPPLSLPFRVML 200

Query: 603 KGLIPYPELREQVKDDFLELFPDMIVY 662
           KGL+PYPELRE+VKDDFLELFP M+VY
Sbjct: 201 KGLVPYPELRERVKDDFLELFPGMVVY 227

Query: 663  722
           
Sbjct: 261  227

Query: 723  782
           
Sbjct: 321  227

Query: 783  804
           
Sbjct: 381  227

HSP 2 Score: 179.1 bits (453), Expect = 7.9e-42
Identity = 85/112 (75.89%), Postives = 100/112 (89.29%), Query Frame = 1


Query: 220 RFIAGSASSPSLSIWRRKKEMGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVA 279
           R+++G  SSPSLSIWRRKKEMGKEGL+V KEL RL+S+ +RLDR+I S VSRLLKSDLVA
Sbjct: 20  RWVSGGPSSPSLSIWRRKKEMGKEGLVVAKELKRLRSDPVRLDRYIRSSVSRLLKSDLVA 79

Query: 280 VLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEKQNR 339
           VL E QRQN VFLC+KLY++VRKE+WYRPDMFFYRDMLMMLA+N+RVE+  R
Sbjct: 80  VLAEFQRQNQVFLCIKLYDIVRKEIWYRPDMFFYRDMLMMLARNRRVEESKR 131

Query: 340  399
           
Sbjct: 140  131

Query: 400  459
           
Sbjct: 200  131

Query: 460  519
           
Sbjct: 260  131

Query: 520  556
           
Sbjct: 320  131

[Close]

BLAST of MU54011 vs. TrEMBL
Match: A0A151SG36_CAJCA (Pentatricopeptide repeat-containing protein At1g62350 family OS=Cajanus cajan GN=KK1_024303 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.7e-32
Identity = 66/93 (70.97%), Postives = 83/93 (89.25%), Query Frame = 3


Query: 525 KEQKGRKTKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSL 584
           + ++  ++K+VW+DLK E VLFDQHTFGDIIR +LD+ + +EAM+IY EMR+SP+ PLSL
Sbjct: 122 RNRRVEESKRVWDDLKAEEVLFDQHTFGDIIRVFLDSGLPTEAMNIYEEMRQSPEPPLSL 181

Query: 585 PFRVILKGLIPYPELREQVKDDFLELFPDMIVY 644
           PFRVILKGLIPYPELRE+VKDDFLE+FPDMI+Y
Sbjct: 182 PFRVILKGLIPYPELREKVKDDFLEIFPDMIIY 214

Query: 645  704
           
Sbjct: 242  214

Query: 705  764
           
Sbjct: 302  214

Query: 765  804
           
Sbjct: 362  214

HSP 2 Score: 178.7 bits (452), Expect = 1.0e-41
Identity = 84/111 (75.68%), Postives = 99/111 (89.19%), Query Frame = 1


Query: 223 FIAGSASSPSLSIWRRKKEMGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVAV 282
           +++G ASSPSLSIWRRKKEM KEGLI  KEL RLQ+  +RLDRFISSHVSRLLKSDLV+V
Sbjct: 34  YLSGPASSPSLSIWRRKKEMSKEGLIAAKELKRLQTKLVRLDRFISSHVSRLLKSDLVSV 93

Query: 283 LVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEKQNR 342
           L E QRQ+ VFLCMKLY+VVR+E+WYRPDMFFYRDMLMMLA+N+RV++  +
Sbjct: 94  LAEFQRQDQVFLCMKLYDVVRREIWYRPDMFFYRDMLMMLARNRRVDETKK 144

Query: 343  402
           
Sbjct: 154  144

Query: 403  462
           
Sbjct: 214  144

Query: 463  522
           
Sbjct: 274  144

Query: 523  556
           
Sbjct: 334  144

[Close]

BLAST of MU54011 vs. TAIR10
Match: AT1G62350.1 (AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36
Identity = 71/93 (76.34%), Postives = 81/93 (87.10%), Query Frame = 3


Query: 525 KEQKGRKTKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSL 584
           + +K  +TK+VWEDLKKE VLFDQHTFGD++R +LDN +  EAM +Y EMRESPDRPLSL
Sbjct: 83  RNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNELPLEAMRLYGEMRESPDRPLSL 142

Query: 585 PFRVILKGLIPYPELREQVKDDFLELFPDMIVY 644
           PFRVILKGL+PYPELRE+VKDDFLELFP MIVY
Sbjct: 143 PFRVILKGLVPYPELREKVKDDFLELFPGMIVY 175

Query: 645  704
           
Sbjct: 203  175

Query: 705  764
           
Sbjct: 263  175

Query: 765  804
           
Sbjct: 323  175

HSP 2 Score: 146.4 bits (368), Expect = 2.9e-35
Identity = 69/92 (75.00%), Postives = 77/92 (83.70%), Query Frame = 1


Query: 280 MGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNV 339
           M KEGLI  KEL RLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQN VFLCMKLY V
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 340 VRKEVWYRPDMFFYRDMLMMLAKNKRVEKQNR 399
           VR+E+WYRPDMFFYRDMLMMLA+NK+V++  +
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKK 92

Query: 400  459
           
Sbjct: 121  92

Query: 460  519
           
Sbjct: 181  92

Query: 520  556
           
Sbjct: 241  92

[Close]

BLAST of MU54011 vs. TAIR10
Match: AT3G46870.1 (AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 49/109 (44.95%), Postives = 75/109 (68.81%), Query Frame = 1


Query: 220 RFIAGSASSPSLSIWRRKKEMGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVA 279
           RF  G    P   +WR KK +GKE L V+  L RL+ +  +LD+FI +HV RLLK D++A
Sbjct: 56  RFHDGRPRGP---LWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLA 115

Query: 280 VLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEK 339
           V+ EL+RQ    L +K++ V++K+ WY+PD+F Y+D+++ LAK+KR+++
Sbjct: 116 VIGELERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDE 161

Query: 340  399
           
Sbjct: 176  161

Query: 400  459
           
Sbjct: 236  161

Query: 460  519
           
Sbjct: 296  161

Query: 520  547
           
Sbjct: 356  161

HSP 2 Score: 90.9 bits (224), Expect = 1.4e-18
Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 3


Query: 525 KEQKGRKTKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSL 584
           K ++  +   +WE +KKE +  D  T+ ++IR +L +   ++AM++Y +M +SPD P  L
Sbjct: 155 KSKRMDEAMALWEKMKKENLFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEEL 214

Query: 585 PFRVILKGLIPYPELREQVKDDFLELFPDMIVY 644
           PFRV+LKGL+P+P LR +VK DF ELFP+   Y
Sbjct: 215 PFRVLLKGLLPHPLLRNKVKKDFEELFPEKHAY 247

Query: 645  704
           
Sbjct: 275  247

Query: 705  764
           
Sbjct: 335  247

Query: 765  804
           
Sbjct: 395  247

[Close]

BLAST of MU54011 vs. TAIR10
Match: AT5G09320.1 (AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain)

HSP 1 Score: 69.7 bits (169), Expect = 3.4e-12
Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 1


Query: 304 VKELNRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYR 363
           V   +   S+   LDR I S   RLLK D+VAVL EL RQN   L +K++  +RKE WY+
Sbjct: 528 VPSTSTTSSSSALLDRVIISKFRRLLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYK 587

Query: 364 PDMFFYRDMLMMLAKNKRVEKQN 423
           P +  Y DM+ ++A N  +E+ N
Sbjct: 588 PQVRMYTDMITVMADNSLMEEVN 610

Query: 424  483
           
Sbjct: 648  610

Query: 484  543
           
Sbjct: 708  610

Query: 544  553
           
Sbjct: 768  610

[Close]

BLAST of MU54011 vs. TAIR10
Match: AT3G42570.1 (AT3G42570.1 peroxidase family protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 24/34 (70.59%), Postives = 24/34 (70.59%), Query Frame = 1


Query: 271 KKEMGKEGLIVVKELNRLQSNFIRLDRFISSHVS 330
           KKE  KEGLI  KEL RLQ+N +RLDRFI SH S
Sbjct: 4   KKEKSKEGLIAAKELKRLQTNLVRLDRFIDSHPS 37

Query: 331  373
           
Sbjct: 64   37

[Close]

BLAST of MU54011 vs. NCBI nr
Match: gi|659098889|ref|XP_008450338.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 2.3e-66
Identity = 137/151 (90.73%), Postives = 138/151 (91.39%), Query Frame = 1


Query: 94  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFXXXXXXXXXXXXRFIAGSASSPSLSIWRRK 153
           MLRLAPNLLRKISSSPVSSTPFHRFSLSTF            RFIAGSASSPSLSIWRRK
Sbjct: 1   MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRK 60

Query: 154 KEMGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLY 213
           KEMGKEGLIVVKEL RLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLY
Sbjct: 61  KEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLY 120

Query: 214 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEK 273
           NVVRKEVWYRPDMFFYRDMLMMLAKNKRVE+
Sbjct: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEE 151

Query: 274  333
           
Sbjct: 181  151

Query: 334  393
           
Sbjct: 241  151

Query: 394  453
           
Sbjct: 301  151

Query: 454  513
           
Sbjct: 361  151

Query: 514  547
           
Sbjct: 421  151

[Close]

BLAST of MU54011 vs. NCBI nr
Match: gi|449442589|ref|XP_004139064.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 8.6e-66
Identity = 135/151 (89.40%), Postives = 137/151 (90.73%), Query Frame = 1


Query: 94  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFXXXXXXXXXXXXRFIAGSASSPSLSIWRRK 153
           MLRLAPNLLRKISSSP+SSTPFHRFSLSTF            RFI GSASSPSLSIWRRK
Sbjct: 1   MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRK 60

Query: 154 KEMGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLY 213
           KEMGKEGLIVVKEL RLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLY
Sbjct: 61  KEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLY 120

Query: 214 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEK 273
           NVVRKEVWYRPDMFFYRDMLMMLAKNKRVE+
Sbjct: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEE 151

Query: 274  333
           
Sbjct: 181  151

Query: 334  393
           
Sbjct: 241  151

Query: 394  453
           
Sbjct: 301  151

Query: 454  513
           
Sbjct: 361  151

Query: 514  547
           
Sbjct: 421  151

[Close]

BLAST of MU54011 vs. NCBI nr
Match: gi|700211457|gb|KGN66553.1| (hypothetical protein Csa_1G629100 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 4.5e-46
Identity = 103/118 (87.29%), Postives = 104/118 (88.14%), Query Frame = 1


Query: 94  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFXXXXXXXXXXXXRFIAGSASSPSLSIWRRK 153
           MLRLAPNLLRKISSSP+SSTPFHRFSLSTF            RFI GSASSPSLSIWRRK
Sbjct: 1   MLRLAPNLLRKISSSPISSTPFHRFSLSTFLNLDLLQQQLLLRFITGSASSPSLSIWRRK 60

Query: 154 KEMGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMK 213
           KEMGKEGLIVVKEL RLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMK
Sbjct: 61  KEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMK 118

Query: 214  273
           
Sbjct: 121  118

Query: 274  333
           
Sbjct: 181  118

Query: 334  393
           
Sbjct: 241  118

Query: 394  448
           
Sbjct: 301  118

[Close]

BLAST of MU54011 vs. NCBI nr
Match: gi|700211458|gb|KGN66554.1| (hypothetical protein Csa_1G629110 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 8.4e-45
Identity = 93/112 (83.04%), Postives = 96/112 (85.71%), Query Frame = 3


Query: 525 KEQKGRKTKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSL 584
           K ++  +TKQVWEDLKKEGVLFDQHTFGDIIRAYLDN MLSEAMDIYREMRESPDRPLSL
Sbjct: 13  KNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNTMLSEAMDIYREMRESPDRPLSL 72

Query: 585 PFRVILKGLIPYPELREQVKDDFLELFPDMIVYXXXXXXXXXXXXRNKSEDD 644
           PFRVILKGLIPYPELREQVKDDFLELFPDMIVY            RNKSEDD
Sbjct: 73  PFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD 124

Query: 645  704
           
Sbjct: 133  124

Query: 705  764
           
Sbjct: 193  124

Query: 765  824
           
Sbjct: 253  124

Query: 825  861
           
Sbjct: 313  124

[Close]

BLAST of MU54011 vs. NCBI nr
Match: gi|802558879|ref|XP_012065875.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Jatropha curcas])

HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41
Identity = 101/160 (63.12%), Postives = 113/160 (70.62%), Query Frame = 1


Query: 112 NLLRKISSSPVSSTPF-------------HRFSL--STFXXXXXXXXXXXXRFIAGSASS 171
           NLLR+ISSS  S TP              H FS   S              + I+  +S 
Sbjct: 5   NLLRRISSSSSSRTPLVSHSPLENLHYQTHLFSKINSVKDQKKQQQLFILSQHISNLSSK 64

Query: 172 PSLSIWRRKKEMGKEGLIVVKELNRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQN 231
           PSLSIWRRKKEMGKEGLIV KEL RLQSN +RLD FI SHVSRLLKSDLVAVL E QRQ+
Sbjct: 65  PSLSIWRRKKEMGKEGLIVAKELKRLQSNPVRLDWFIKSHVSRLLKSDLVAVLAEFQRQD 124

Query: 232 HVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEK 291
            VFLCMKLYNVVRKE+WYRPDMFFYRDMLMMLA+N++V++
Sbjct: 125 QVFLCMKLYNVVRKEIWYRPDMFFYRDMLMMLARNRKVDE 164

Query: 292  351
           
Sbjct: 185  164

Query: 352  411
           
Sbjct: 245  164

Query: 412  471
           
Sbjct: 305  164

Query: 472  531
           
Sbjct: 365  164

Query: 532  547
           
Sbjct: 425  164

The following BLAST results are available for this feature:

BLAST of MU54011 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PPR89_ARATH	2.1e-35	76.34	Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana GN...	[more]
PP266_ARATH	2.9e-21	44.95	Pentatricopeptide repeat-containing protein At3g46870 OS=Arabidopsis thaliana GN...	[more]

BLAST of MU54011 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXS9_CUCSA	3.7e-47	87.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629100 PE=4 SV=1	[more]
A0A0A0LZW3_CUCSA	1.7e-44	83.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629110 PE=4 SV=1	[more]
A0A0A0LZW3_CUCSA	4.4e+00	94.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629110 PE=4 SV=1	[more]
A0A078DWB1_BRANA	4.8e-31	74.71	BnaA06g04430D protein OS=Brassica napus GN=BnaA06g04430D PE=4 SV=1	[more]
A0A151SG36_CAJCA	9.7e-32	70.97	Pentatricopeptide repeat-containing protein At1g62350 family OS=Cajanus cajan GN...	[more]

BLAST of MU54011 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62350.1	1.2e-36	76.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G46870.1	1.6e-22	44.95	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G09320.1	3.4e-12	43.37	Vacuolar sorting protein 9 (VPS9) domain	[more]
AT3G42570.1	1.6e-06	70.59	peroxidase family protein	[more]

BLAST of MU54011 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098889\|ref\|XP_008450338.1\|	2.3e-66	90.73	PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Cucumis melo]	[more]
gi\|449442589\|ref\|XP_004139064.1\|	8.6e-66	89.40	PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Cucumis sativu...	[more]
gi\|700211457\|gb\|KGN66553.1\|	4.5e-46	87.29	hypothetical protein Csa_1G629100 [Cucumis sativus]	[more]
gi\|700211458\|gb\|KGN66554.1\|	8.4e-45	83.04	hypothetical protein Csa_1G629110 [Cucumis sativus]	[more]
gi\|802558879\|ref\|XP_012065875.1\|	1.5e-41	63.13	PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Jatropha curca...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C015110	MELO3C015110	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
AI03B06	AI03B06	EST
AI30E08	AI30E08	EST
PS32D05	PS32D05	EST
PS36G02	PS36G02	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 201..228 score: 0.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 163..197 score: 5.974coord: 198..232 score: 9
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 28..287 score: 4.7
None	No IPR available	PANTHER	PTHR24015:SF590	SUBFAMILY NOT NAMED	coord: 28..287 score: 4.7