MU51634 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU51634
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionE3 ubiquitin-protein ligase synoviolin
Locationchr5 : 25629002 .. 25633924 (-)
Sequence length950
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

AAACTAGTATGTGGACATCTTTTTCATGTCCATTGTCTCCGATCTTGGTTGGAGCGACAACATACTTGTCCCACTTGTAGAGCCCTTGTTGTACCACCCGAAGGTTCAAGTACAACAAGCGGTCATCATGGAGTGCAGTCTGATGCTAACCAACAAGGAACAGGAACCACAAGTTCATCTGCACAAGGTACAAGTGGCACAGGCGTTACTAACGCTAATTTAAGTCATCATCAGGCTAGAGTTCGAGCTGCTGCCGCTGCTGCTTCAATATATGAGAAATCGTATGTTTATCCTTGTGCGAGCACATTAGTATGGTCTCTTGGATATGCAGTAGTTCCTCAAGTTGAAAGACCTTTGTTTGACTCTAACAATACAGAAACAAATGGAGAGCAATCTCCCAATGGACATCCACAGTACTTTTCATTTCCTGGCGGCCCTTCAAACCTGTCCTTCACTCAATTTCCCCAAAATATCTTTGTTCCTTTTCAGCCACGAGAGGGCACTGGAAACAATATAGAGGAATTGGGGAGTAGTCTAAATGTATCAGGCTCACAGCTTGAAGCTCAAGAAAAATTTCTTCAACAACAGATTGAGTTCCTTCAGAATCAACTGCAACTTCTCCGTAAACCAAAAGTTGAGGAAAGCTCAAGAGGAGCTAGCGAGACAGATAAGAAAGGGAAAAGTTTAGCTATCTCACCGTCGCCATCGGCGTCATTGTCTTCATCAGATTCTCATCCACCTGGAGAAACGGAAGGGTGGTAAGATAGAATAAATGTGCATAATATTATAGTGTAATAATACGAGACTGCAGATTGACACAATCACATAGATATGTGTCTATTGTATACGGAAGATGTACTTGGTAACTTTTTAGAAAGCAGTCTTCTTCCCCTTTGCCATGTTGGTGGTTGGTTGGGTTCGGCTGTAAATGCTGAATTTGGTCTCTTTTT
Homology
[Close]
BLAST of MU51634 vs. Swiss-Prot
Match: HRD1B_ARATH (ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana GN=HRD1B PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.6e-23
Identity = 57/118 (48.31%), Postives = 68/118 (57.63%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTTSGHHGVQSDANXXXXXXXXX 60
           KLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +ST SG+ G   ++          
Sbjct: 304 KLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGTSSS 363

Query: 61  XXXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYP-CASTLVWSLGYAVVPQVE 120
                      + N+S H+          SIY +S VYP  A+TLVWS G +++PQ E
Sbjct: 364 DGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQTE 421

Query: 121  180
           
Sbjct: 424  421

Query: 181  240
           
Sbjct: 484  421

Query: 241  300
           
Sbjct: 544  421

Query: 301  349
           
Sbjct: 604  421

[Close]
BLAST of MU51634 vs. Swiss-Prot
Match: HRD1A_ARATH (ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana GN=HRD1A PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.0e-21
Identity = 53/116 (45.69%), Postives = 60/116 (51.72%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTTSGHHGVQSDANXXXXXXXXX 60
           KL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE  +S   G   +   +          
Sbjct: 304 KLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQGTSSSGNQ 363

Query: 61  XXXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQV 120
                    V+N +LS H           S+Y KS VYP A+T+ WS G     QV
Sbjct: 364 GSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSGVPGTEQV 419

Query: 121  180
           
Sbjct: 424  419

Query: 181  240
           
Sbjct: 484  419

Query: 241  300
           
Sbjct: 544  419

Query: 301  346
           
Sbjct: 604  419

[Close]
BLAST of MU51634 vs. Swiss-Prot
Match: HRD1_ORYSJ (ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica GN=HRD1 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.2e-18
Identity = 53/136 (38.97%), Postives = 63/136 (46.32%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANXXXXXXXXXX 60
           KL+CGHLFHVHCLRSWLERQHTCPTCRA ++PP+   T +  HGV               
Sbjct: 304 KLLCGHLFHVHCLRSWLERQHTCPTCRAPILPPDNGRTAARPHGVHPGVQ------PVPG 363

Query: 61  XXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQVERPLF 120
                       N+S  Q          S+Y +S+ YP A+ L     Y+  PQ      
Sbjct: 364 NGTPGSERAAGENISRRQAKLEAAASAASLYGRSFAYPPANNL---NRYSTPPQSTSNGP 423

Query: 121 DSNNTETNGEQSPNGH 180
            S    T+  QSP GH
Sbjct: 424 QSGEASTS-NQSPKGH 429

Query: 181  240
           
Sbjct: 484  429

Query: 241  300
           
Sbjct: 544  429

Query: 301  360
           
Sbjct: 604  429

Query: 361  409
           
Sbjct: 664  429

[Close]
BLAST of MU51634 vs. Swiss-Prot
Match: AMFR_MOUSE (E3 ubiquitin-protein ligase AMFR OS=Mus musculus GN=Amfr PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 8.7e-08
Identity = 26/50 (52.00%), Postives = 28/50 (56.00%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDAN 60
           KL CGHLFH  CLRSWLE+  +CPTCR  +   +GS     H G   D N
Sbjct: 353 KLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADGSRAREDHQGENLDEN 402

Query: 61   120
           
Sbjct: 413  402

Query: 121  151
           
Sbjct: 473  402

[Close]
BLAST of MU51634 vs. Swiss-Prot
Match: HRD1_SCHPO (ERAD-associated E3 ubiquitin-protein ligase hrd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hrd1 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.3e-07
Identity = 22/38 (57.89%), Postives = 25/38 (65.79%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST 60
           +L CGH+ H HCLR+WLERQ TCP CR  V+  + S T
Sbjct: 325 RLPCGHILHFHCLRNWLERQQTCPICRRSVIGNQSSPT 362

Query: 61   115
           
Sbjct: 385  362

[Close]
BLAST of MU51634 vs. TrEMBL
Match: A0A0A0LJG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013330 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.2e-98
Identity = 185/251 (73.71%), Postives = 186/251 (74.10%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANXXXXXXXXXX 60
           KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTT+GHHGVQSDAN          
Sbjct: 304 KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTTGHHGVQSDANQQGTGTTSSS 363

Query: 61  XXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQVERPLF 120
                   VTN NLSHHQ          SIYEKSYVYPCASTLVWSLGYAVVPQVERPLF
Sbjct: 364 AQGTSGTGVTNDNLSHHQARVRAAAAAASIYEKSYVYPCASTLVWSLGYAVVPQVERPLF 423

Query: 121 DSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSLN 180
           DSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSLN
Sbjct: 424 DSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSLN 483

Query: 181 VSGSQLEAQEKFXXXXXXXXXXXXXXXRKPKVEESSRGASETDKKGKXXXXXXXXXXXXX 240
           VSGSQLEAQEKF               RKPKVEESSRGASE DKKGK             
Sbjct: 484 VSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASEADKKGKSLAISPSSSASLS 543

Query: 241 XXXXXXXGETE 300
                  GETE
Sbjct: 544 SSDSHPPGETE 554

Query: 301  360
           
Sbjct: 604  554

Query: 361  420
           
Sbjct: 664  554

Query: 421  480
           
Sbjct: 724  554

Query: 481  540
           
Sbjct: 784  554

Query: 541  600
           
Sbjct: 844  554

Query: 601  660
           
Sbjct: 904  554

Query: 661  720
           
Sbjct: 964  554

Query: 721  754
           
Sbjct: 1024  554

[Close]
BLAST of MU51634 vs. TrEMBL
Match: A0A061GUW0_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_041140 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46
Identity = 112/230 (48.70%), Postives = 135/230 (58.70%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTTSGHHGVQSDANXXXXXXXXX 60
           KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE G+S+  G HG +SDA+         
Sbjct: 304 KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSSAGGQHGPRSDAH--QQGSSTS 363

Query: 61  XXXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQVERPL 120
                    +   NL+ HQ          SIYEKSY+YP A+TLVWS GYAV+PQ   P 
Sbjct: 364 SATQGPGGDMATDNLTQHQARLQAAAAAASIYEKSYIYPSANTLVWSPGYAVLPQAYGPS 423

Query: 121 FDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSL 180
            DS   E++GE++  G  Q F+ PGG +NLSF QFP  +FVPF+     GN+ E  GS  
Sbjct: 424 ADSTKVESSGERTFIGQ-QQFAIPGGHANLSFPQFPHCVFVPFELPGANGNSGEGSGSYQ 483

Query: 181 NVSGSQLEAQEKFXXXXXXXXXXXXXXXRKPKVEESS--RGASETDKKGK 240
           N+  SQLEAQ+                 +KPK EES        +D+KGK
Sbjct: 484 NIPDSQLEAQK----IIQQKIEHQLQLLQKPKTEESMDIGLTGSSDRKGK 526

Query: 241  300
           
Sbjct: 544  526

Query: 301  360
           
Sbjct: 604  526

Query: 361  420
           
Sbjct: 664  526

Query: 421  480
           
Sbjct: 724  526

Query: 481  540
           
Sbjct: 784  526

Query: 541  600
           
Sbjct: 844  526

Query: 601  660
           
Sbjct: 904  526

Query: 661  682
           
Sbjct: 964  526

[Close]
BLAST of MU51634 vs. TrEMBL
Match: A0A067EI68_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008218mg PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.4e-44
Identity = 98/193 (50.78%), Postives = 115/193 (59.59%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSG-HHGVQSDANXXXXXXXXX 60
           KL+CGHLFHVHCLRSWLERQHTCPTCRALVVPPE  ++T+G  HG + D +         
Sbjct: 304 KLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATANT 363

Query: 61  XXXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQVERPL 120
                      N NL+ HQ          S+Y KSYVYP  +TLVWS GY V+PQ  RPL
Sbjct: 364 ASQGSANDAANN-NLTLHQARLQAAAVAASVYGKSYVYPSPNTLVWSPGYVVLPQANRPL 423

Query: 121 FDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSL 180
            D  + E   EQ+  G PQ F  PGG +  SF QFPQ++FVPFQ  +      E L S+ 
Sbjct: 424 GDYTSVELGQEQASAGQPQQFVNPGGSATFSFPQFPQSVFVPFQTPDANLIGGERLPSTQ 483

Query: 181 NVSGSQLEAQEKF 240
           N   SQLEAQ KF
Sbjct: 484 NTPVSQLEAQRKF 495

Query: 241  300
           
Sbjct: 544  495

Query: 301  360
           
Sbjct: 604  495

Query: 361  420
           
Sbjct: 664  495

Query: 421  480
           
Sbjct: 724  495

Query: 481  540
           
Sbjct: 784  495

Query: 541  577
           
Sbjct: 844  495

[Close]
BLAST of MU51634 vs. TrEMBL
Match: A0A067EHE5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008218mg PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.4e-44
Identity = 98/193 (50.78%), Postives = 115/193 (59.59%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSG-HHGVQSDANXXXXXXXXX 60
           KL+CGHLFHVHCLRSWLERQHTCPTCRALVVPPE  ++T+G  HG + D +         
Sbjct: 304 KLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATANT 363

Query: 61  XXXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQVERPL 120
                      N NL+ HQ          S+Y KSYVYP  +TLVWS GY V+PQ  RPL
Sbjct: 364 ASQGSANDAANN-NLTLHQARLQAAAVAASVYGKSYVYPSPNTLVWSPGYVVLPQANRPL 423

Query: 121 FDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSL 180
            D  + E   EQ+  G PQ F  PGG +  SF QFPQ++FVPFQ  +      E L S+ 
Sbjct: 424 GDYTSVELGQEQASAGQPQQFVNPGGSATFSFPQFPQSVFVPFQTPDANLIGGERLPSTQ 483

Query: 181 NVSGSQLEAQEKF 240
           N   SQLEAQ KF
Sbjct: 484 NTPVSQLEAQRKF 495

Query: 241  300
           
Sbjct: 544  495

Query: 301  360
           
Sbjct: 604  495

Query: 361  420
           
Sbjct: 664  495

Query: 421  480
           
Sbjct: 724  495

Query: 481  540
           
Sbjct: 784  495

Query: 541  577
           
Sbjct: 844  495

[Close]
BLAST of MU51634 vs. TrEMBL
Match: A0A0B0MU44_GOSAR (E3 ubiquitin-protein ligase synoviolin OS=Gossypium arboreum GN=F383_26974 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.0e-44
Identity = 110/232 (47.41%), Postives = 133/232 (57.33%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTTSGHHGVQSDANXXXXXXXXX 60
           KL+CGHLFHVHCLRSWLERQHTCPTCRALVVPPE G+S++ G HG  SDA          
Sbjct: 304 KLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSSSGGQHGPWSDAQ--GQGSGTG 363

Query: 61  XXXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQVERPL 120
                    +   NL+ HQ          SIYEKSYVYP A+TLVWS GYAV+P+     
Sbjct: 364 SARQGSDGDMAADNLTQHQARLQAAATAASIYEKSYVYPSANTLVWSPGYAVLPKAYWQP 423

Query: 121 FDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSL 180
            DS   E++GE +  G  + F  PGG  NLSF +FP   FVPFQ    TGN  E   S+L
Sbjct: 424 DDSTKGESSGETTSTG--EQFVIPGGQFNLSFPRFPHCAFVPFQLPRVTGNMGEASSSNL 483

Query: 181 NVSGSQLEAQEKF--XXXXXXXXXXXXXXXRKPKVEES--SRGASETDKKGK 240
           ++  SQLEAQ+K                  +KPK EES  +   + +D+KGK
Sbjct: 484 HIPDSQLEAQKKIIQQQIEVLQNQLQLLQMQKPKTEESVDTGPTASSDRKGK 531

Query: 241  300
           
Sbjct: 544  531

Query: 301  360
           
Sbjct: 604  531

Query: 361  420
           
Sbjct: 664  531

Query: 421  480
           
Sbjct: 724  531

Query: 481  540
           
Sbjct: 784  531

Query: 541  600
           
Sbjct: 844  531

Query: 601  660
           
Sbjct: 904  531

Query: 661  682
           
Sbjct: 964  531

[Close]
BLAST of MU51634 vs. TAIR10
Match: AT1G65040.2 (AT1G65040.2 RING/U-box superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 5.4e-24
Identity = 57/118 (48.31%), Postives = 68/118 (57.63%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTTSGHHGVQSDANXXXXXXXXX 60
           KLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +ST SG+ G   ++          
Sbjct: 304 KLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGTSSS 363

Query: 61  XXXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYP-CASTLVWSLGYAVVPQVE 120
                      + N+S H+          SIY +S VYP  A+TLVWS G +++PQ E
Sbjct: 364 DGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQTE 421

Query: 121  180
           
Sbjct: 424  421

Query: 181  240
           
Sbjct: 484  421

Query: 241  300
           
Sbjct: 544  421

Query: 301  349
           
Sbjct: 604  421

[Close]
BLAST of MU51634 vs. TAIR10
Match: AT3G16090.1 (AT3G16090.1 RING/U-box superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-22
Identity = 53/116 (45.69%), Postives = 60/116 (51.72%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTTSGHHGVQSDANXXXXXXXXX 60
           KL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE  +S   G   +   +          
Sbjct: 304 KLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQGTSSSGNQ 363

Query: 61  XXXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQV 120
                    V+N +LS H           S+Y KS VYP A+T+ WS G     QV
Sbjct: 364 GSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSGVPGTEQV 419

Query: 121  180
           
Sbjct: 424  419

Query: 181  240
           
Sbjct: 484  419

Query: 241  300
           
Sbjct: 544  419

Query: 301  346
           
Sbjct: 604  419

[Close]
BLAST of MU51634 vs. NCBI nr
Match: gi|659070498|ref|XP_008455400.1| (PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Cucumis melo])

HSP 1 Score: 370.9 bits (951), Expect = 2.2e-99
Identity = 188/251 (74.90%), Postives = 188/251 (74.90%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANXXXXXXXXXX 60
           KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDAN          
Sbjct: 304 KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANQQGTGTTSSS 363

Query: 61  XXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQVERPLF 120
                   VTNANLSHHQ          SIYEKSYVYPCASTLVWSLGYAVVPQVERPLF
Sbjct: 364 AQGTSGTGVTNANLSHHQARVRAAAAAASIYEKSYVYPCASTLVWSLGYAVVPQVERPLF 423

Query: 121 DSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSLN 180
           DSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSLN
Sbjct: 424 DSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSLN 483

Query: 181 VSGSQLEAQEKFXXXXXXXXXXXXXXXRKPKVEESSRGASETDKKGKXXXXXXXXXXXXX 240
           VSGSQLEAQEKF               RKPKVEESSRGASETDKKGK             
Sbjct: 484 VSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASETDKKGKSLAISPSPSASLS 543

Query: 241 XXXXXXXGETE 300
                  GETE
Sbjct: 544 SSDSHPPGETE 554

Query: 301  360
           
Sbjct: 604  554

Query: 361  420
           
Sbjct: 664  554

Query: 421  480
           
Sbjct: 724  554

Query: 481  540
           
Sbjct: 784  554

Query: 541  600
           
Sbjct: 844  554

Query: 601  660
           
Sbjct: 904  554

Query: 661  720
           
Sbjct: 964  554

Query: 721  754
           
Sbjct: 1024  554

[Close]
BLAST of MU51634 vs. NCBI nr
Match: gi|449442867|ref|XP_004139202.1| (PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 9.1e-98
Identity = 185/251 (73.71%), Postives = 186/251 (74.10%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANXXXXXXXXXX 60
           KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTT+GHHGVQSDAN          
Sbjct: 304 KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTTGHHGVQSDANQQGTGTTSSS 363

Query: 61  XXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQVERPLF 120
                   VTN NLSHHQ          SIYEKSYVYPCASTLVWSLGYAVVPQVERPLF
Sbjct: 364 AQGTSGTGVTNDNLSHHQARVRAAAAAASIYEKSYVYPCASTLVWSLGYAVVPQVERPLF 423

Query: 121 DSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSLN 180
           DSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSLN
Sbjct: 424 DSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSLN 483

Query: 181 VSGSQLEAQEKFXXXXXXXXXXXXXXXRKPKVEESSRGASETDKKGKXXXXXXXXXXXXX 240
           VSGSQLEAQEKF               RKPKVEESSRGASE DKKGK             
Sbjct: 484 VSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASEADKKGKSLAISPSSSASLS 543

Query: 241 XXXXXXXGETE 300
                  GETE
Sbjct: 544 SSDSHPPGETE 554

Query: 301  360
           
Sbjct: 604  554

Query: 361  420
           
Sbjct: 664  554

Query: 421  480
           
Sbjct: 724  554

Query: 481  540
           
Sbjct: 784  554

Query: 541  600
           
Sbjct: 844  554

Query: 601  660
           
Sbjct: 904  554

Query: 661  720
           
Sbjct: 964  554

Query: 721  754
           
Sbjct: 1024  554

[Close]
BLAST of MU51634 vs. NCBI nr
Match: gi|590585838|ref|XP_007015539.1| (RING/U-box superfamily protein [Theobroma cacao])

HSP 1 Score: 193.4 bits (490), Expect = 6.2e-46
Identity = 112/230 (48.70%), Postives = 135/230 (58.70%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTTSGHHGVQSDANXXXXXXXXX 60
           KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE G+S+  G HG +SDA+         
Sbjct: 304 KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSSAGGQHGPRSDAH--QQGSSTS 363

Query: 61  XXXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQVERPL 120
                    +   NL+ HQ          SIYEKSY+YP A+TLVWS GYAV+PQ   P 
Sbjct: 364 SATQGPGGDMATDNLTQHQARLQAAAAAASIYEKSYIYPSANTLVWSPGYAVLPQAYGPS 423

Query: 121 FDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSL 180
            DS   E++GE++  G  Q F+ PGG +NLSF QFP  +FVPF+     GN+ E  GS  
Sbjct: 424 ADSTKVESSGERTFIGQ-QQFAIPGGHANLSFPQFPHCVFVPFELPGANGNSGEGSGSYQ 483

Query: 181 NVSGSQLEAQEKFXXXXXXXXXXXXXXXRKPKVEESS--RGASETDKKGK 240
           N+  SQLEAQ+                 +KPK EES        +D+KGK
Sbjct: 484 NIPDSQLEAQK----IIQQKIEHQLQLLQKPKTEESMDIGLTGSSDRKGK 526

Query: 241  300
           
Sbjct: 544  526

Query: 301  360
           
Sbjct: 604  526

Query: 361  420
           
Sbjct: 664  526

Query: 421  480
           
Sbjct: 724  526

Query: 481  540
           
Sbjct: 784  526

Query: 541  600
           
Sbjct: 844  526

Query: 601  660
           
Sbjct: 904  526

Query: 661  682
           
Sbjct: 964  526

[Close]
BLAST of MU51634 vs. NCBI nr
Match: gi|641831555|gb|KDO50611.1| (hypothetical protein CISIN_1g008218mg [Citrus sinensis])

HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44
Identity = 98/193 (50.78%), Postives = 115/193 (59.59%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSG-HHGVQSDANXXXXXXXXX 60
           KL+CGHLFHVHCLRSWLERQHTCPTCRALVVPPE  ++T+G  HG + D +         
Sbjct: 304 KLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATANT 363

Query: 61  XXXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQVERPL 120
                      N NL+ HQ          S+Y KSYVYP  +TLVWS GY V+PQ  RPL
Sbjct: 364 ASQGSANDAANN-NLTLHQARLQAAAVAASVYGKSYVYPSPNTLVWSPGYVVLPQANRPL 423

Query: 121 FDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSL 180
            D  + E   EQ+  G PQ F  PGG +  SF QFPQ++FVPFQ  +      E L S+ 
Sbjct: 424 GDYTSVELGQEQASAGQPQQFVNPGGSATFSFPQFPQSVFVPFQTPDANLIGGERLPSTQ 483

Query: 181 NVSGSQLEAQEKF 240
           N   SQLEAQ KF
Sbjct: 484 NTPVSQLEAQRKF 495

Query: 241  300
           
Sbjct: 544  495

Query: 301  360
           
Sbjct: 604  495

Query: 361  420
           
Sbjct: 664  495

Query: 421  480
           
Sbjct: 724  495

Query: 481  540
           
Sbjct: 784  495

Query: 541  577
           
Sbjct: 844  495

[Close]
BLAST of MU51634 vs. NCBI nr
Match: gi|641831556|gb|KDO50612.1| (hypothetical protein CISIN_1g008218mg [Citrus sinensis])

HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44
Identity = 98/193 (50.78%), Postives = 115/193 (59.59%), Query Frame = 1 

Query: 1   KLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSG-HHGVQSDANXXXXXXXXX 60
           KL+CGHLFHVHCLRSWLERQHTCPTCRALVVPPE  ++T+G  HG + D +         
Sbjct: 304 KLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATANT 363

Query: 61  XXXXXXXXXVTNANLSHHQXXXXXXXXXXSIYEKSYVYPCASTLVWSLGYAVVPQVERPL 120
                      N NL+ HQ          S+Y KSYVYP  +TLVWS GY V+PQ  RPL
Sbjct: 364 ASQGSANDAANN-NLTLHQARLQAAAVAASVYGKSYVYPSPNTLVWSPGYVVLPQANRPL 423

Query: 121 FDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGSSL 180
            D  + E   EQ+  G PQ F  PGG +  SF QFPQ++FVPFQ  +      E L S+ 
Sbjct: 424 GDYTSVELGQEQASAGQPQQFVNPGGSATFSFPQFPQSVFVPFQTPDANLIGGERLPSTQ 483

Query: 181 NVSGSQLEAQEKF 240
           N   SQLEAQ KF
Sbjct: 484 NTPVSQLEAQRKF 495

Query: 241  300
           
Sbjct: 544  495

Query: 301  360
           
Sbjct: 604  495

Query: 361  420
           
Sbjct: 664  495

Query: 421  480
           
Sbjct: 724  495

Query: 481  540
           
Sbjct: 784  495

Query: 541  577
           
Sbjct: 844  495

The following BLAST results are available for this feature:
BLAST of MU51634 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HRD1B_ARATH9.6e-2348.31ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana GN=HRD... [more]
HRD1A_ARATH4.0e-2145.69ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana GN=HRD... [more]
HRD1_ORYSJ4.2e-1838.97ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica... [more]
AMFR_MOUSE8.7e-0852.00E3 ubiquitin-protein ligase AMFR OS=Mus musculus GN=Amfr PE=1 SV=2[more]
HRD1_SCHPO3.3e-0757.89ERAD-associated E3 ubiquitin-protein ligase hrd1 OS=Schizosaccharomyces pombe (s... [more]
BLAST of MU51634 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJG4_CUCSA2.2e-9873.71Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013330 PE=4 SV=1[more]
A0A061GUW0_THECC1.1e-4648.70RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_041140 PE=4 SV=1[more]
A0A067EI68_CITSI2.4e-4450.78Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008218mg PE=4 SV=1[more]
A0A067EHE5_CITSI2.4e-4450.78Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008218mg PE=4 SV=1[more]
A0A0B0MU44_GOSAR4.0e-4447.41E3 ubiquitin-protein ligase synoviolin OS=Gossypium arboreum GN=F383_26974 PE=4 ... [more]
BLAST of MU51634 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G65040.25.4e-2448.31 RING/U-box superfamily protein[more]
AT3G16090.12.3e-2245.69 RING/U-box superfamily protein[more]
BLAST of MU51634 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070498|ref|XP_008455400.1|2.2e-9974.90PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Cucumis melo][more]
gi|449442867|ref|XP_004139202.1|9.1e-9873.71PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B [Cucumis sativus][more]
gi|590585838|ref|XP_007015539.1|6.2e-4648.70RING/U-box superfamily protein [Theobroma cacao][more]
gi|641831555|gb|KDO50611.1|4.4e-4450.78hypothetical protein CISIN_1g008218mg [Citrus sinensis][more]
gi|641831556|gb|KDO50612.1|4.4e-4450.78hypothetical protein CISIN_1g008218mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR024766Znf_RING_H2
Vocabulary: Cellular Component
TermDefinition
GO:0000836Hrd1p ubiquitin ligase complex
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO:0030433ER-associated ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0061630ubiquitin protein ligase activity
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030433 ER-associated ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0000836 Hrd1p ubiquitin ligase complex
molecular_function GO:0005515 protein binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0008270 zinc ion binding
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C004334MELO3C004334gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
15D10D0315D10D03EST
FR15M1FR15M1EST
PS30B01PS30B01EST


InterPro
Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 4..27
score: 9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 2..34
score: 9.5
IPR024766Zinc finger, RING-H2-typePFAMPF12678zf-rbx1coord: 4..27
score: 2.
NoneNo IPR availableunknownCoilCoilcoord: 183..203
scor
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 195..244
score: 5.9E-17coord: 1..73
score: 5.9
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 2..33
score: 2.15