MU51198 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU51198
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	DNA-directed RNA polymerase I and III subunit RPAC2
Location	chr12 : 1254815 .. 1259802 (-)
Sequence length	732

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GCCCAATCCCTTTAGCGCATTCAATCCCCCTTCGACAGTTCGACGTTCACATTTCGTAATCCCTTCGGCGATAAAATTCCGGCGACCTTTACATTCCGCCGGCGGCCTTTGCACATTTAGATCGTAAGTTCGACGGCACGATTCGCCTTTACACTTTCCAATCGCAAGTTCGACGGACTTCACATTCTGGGTTCTTCATCTTGTTTTGTCGGGTTCTTCATCTTGTTTTGTCCAAGCAATGGAACATGGATCCTTTACAGATGAGACCAAATCAACATTTTCTATGGCTGATGAAGATCATACACTTGCAAATGCTCTCAGATACACTTTGAATCAAGATCCAAGAGTGACATTCTGTGGGTACAGCATCCCTCATCCTTCAGATAATCGAGTTAATATTAGAGTCCAGACAACAGGTGATCCTGCTAGAGAAGTTTTGAAAGATGCTTGTCAGAACTTGATGGTGGTGTGTCAGCATGTGAGGAACACATTTGACAAGGCTGTGCTTGATTTCAATCTCACCAAAGCAAAAGAAGAACCTGAGGGAGACATTAATATCGAATAGAATGGGACCTTTGTTTTTTCTTTGCCTTGTAATTTTACCCTTTTTTTTTTGTTAGTTTACAGTTTATTGAGATGGGTTTGTTAGAAACAGATTAATTCCATTGAATTTTGCTTGCGTTTATTGGTACTCAACTGAGAGCTTATCCCTCCCTTCAGGGGTTTCATGTT

Library


Library category	ESTs
melon PFTP2 library	8

Homology

[Close]

BLAST of MU51198 vs. Swiss-Prot
Match: RPAC2_MOUSE (DNA-directed RNA polymerases I and III subunit RPAC2 OS=Mus musculus GN=Polr1d PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-16
Identity = 44/103 (42.72%), Postives = 62/103 (60.19%), Query Frame = 2


Query: 239 MEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 298
           M   + TD    TF + +EDHTL N LRY + ++P V FCGY+  HPS++++N+R+QT G
Sbjct: 29  MVQAAGTDRQCVTFVLHEEDHTLGNCLRYIIMKNPEVEFCGYTTTHPSESKINLRIQTRG 88

Query: 299 D-PAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKA-KEEP 358
             PA E  +     L+ VCQHV   F+ ++ D+   KA K+EP
Sbjct: 89  ALPAVEPFQKGLNELLNVCQHVLVKFEASIKDYKAKKASKKEP 131

Query: 359  418
           
Sbjct: 149  131

Query: 419  478
           
Sbjct: 209  131

Query: 479  538
           
Sbjct: 269  131

Query: 539  542
           
Sbjct: 329  131

[Close]

BLAST of MU51198 vs. Swiss-Prot
Match: RPAC2_XENLA (DNA-directed RNA polymerases I and III subunit RPAC2 OS=Xenopus laevis GN=polr1d PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-16
Identity = 41/90 (45.56%), Postives = 58/90 (64.44%), Query Frame = 2


Query: 260 DETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQT-TGDPAREV 319
           +E+  TF + +EDHTL N+LRY + ++P V FCGYSI HPS+ ++N R+QT  G PA E 
Sbjct: 20  EESCVTFVLHEEDHTLGNSLRYMVMKNPEVEFCGYSITHPSETKINFRIQTRNGIPAVEP 79

Query: 320 LKDACQNLMVVCQHVRNTFDKAVLDFNLTK 379
            +     L+ VCQHV NTF+ ++ ++   K
Sbjct: 80  FRRGLNELVDVCQHVLNTFETSIKEYKEQK 109

Query: 380  439
           
Sbjct: 140  109

Query: 440  499
           
Sbjct: 200  109

Query: 500  527
           
Sbjct: 260  109

[Close]

BLAST of MU51198 vs. Swiss-Prot
Match: RPAC2_HUMAN (DNA-directed RNA polymerases I and III subunit RPAC2 OS=Homo sapiens GN=POLR1D PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-16
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 2


Query: 239 MEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 298
           M   + TD    TF + +EDHTL N+LRY + ++P V FCGY+  HPS++++N+R+QT G
Sbjct: 29  MVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSESKINLRIQTRG 88

Query: 299 D-PAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKA 358
             PA E  +     LM VCQHV + F+ ++ D+   KA
Sbjct: 89  TLPAVEPFQRGLNELMNVCQHVLDKFEASIKDYKDQKA 126

Query: 359  418
           
Sbjct: 149  126

Query: 419  478
           
Sbjct: 209  126

Query: 479  530
           
Sbjct: 269  126

[Close]

BLAST of MU51198 vs. Swiss-Prot
Match: RPAC2_BOVIN (DNA-directed RNA polymerases I and III subunit RPAC2 OS=Bos taurus GN=POLR1D PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.8e-16
Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 2


Query: 239 MEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 298
           M   + TD    TF + +EDHTL N+LRY + ++P V FCGY+  HPS++++N+R+QT G
Sbjct: 29  MVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSESKINLRIQTRG 88

Query: 299 D-PAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKA 358
             PA E  +    +LM VCQHV + F+ ++ ++   KA
Sbjct: 89  ALPAVEPFQRGLTDLMNVCQHVLDKFEASIKEYKDQKA 126

Query: 359  418
           
Sbjct: 149  126

Query: 419  478
           
Sbjct: 209  126

Query: 479  530
           
Sbjct: 269  126

[Close]

BLAST of MU51198 vs. Swiss-Prot
Match: RPAC2_DANRE (DNA-directed RNA polymerases I and III subunit RPAC2 OS=Danio rerio GN=polr1d PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.8e-16
Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = 2


Query: 260 DETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQT-TGDPAREV 319
           DE   TF + +EDHTL N+LRY + +   V FCGYSI HPS++++N R+QT  G PA E 
Sbjct: 19  DEGCVTFVLNEEDHTLGNSLRYMIMKSQDVEFCGYSITHPSESKINFRIQTRDGVPASEP 78

Query: 320 LKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEE 379
           L++   NL  VC+HV  TF+  + +F   K +EE
Sbjct: 79  LRNGLNNLTDVCKHVLQTFEARMKEF---KEQEE 109

Query: 380  439
           
Sbjct: 139  109

Query: 440  499
           
Sbjct: 199  109

Query: 500  539
           
Sbjct: 259  109

[Close]

BLAST of MU51198 vs. TrEMBL
Match: A0A0A0LV21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527910 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 2


Query: 239 MEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 298
           MEHGSFTDETKSTFSMADEDHTLANALR TLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG
Sbjct: 1   MEHGSFTDETKSTFSMADEDHTLANALRCTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 299 DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE 358
           DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTK KE+P GDINI+
Sbjct: 61  DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKPKEKPVGDINIK 108

Query: 359  418
           
Sbjct: 121  108

Query: 419  478
           
Sbjct: 181  108

Query: 479  538
           
Sbjct: 241  108

Query: 539  563
           
Sbjct: 301  108

[Close]

BLAST of MU51198 vs. TrEMBL
Match: A0A0A0LUT5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G095010 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 8.7e-47
Identity = 96/108 (88.89%), Postives = 98/108 (90.74%), Query Frame = 2


Query: 239 MEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 298
           MEHGSFTDETKSTFS+ADEDHTLAN LRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG
Sbjct: 1   MEHGSFTDETKSTFSVADEDHTLANTLRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 299 DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE 358
           DPAREVLKDACQNLMVVCQHVRNTFDKAVLD  LT     P  DINI+
Sbjct: 61  DPAREVLKDACQNLMVVCQHVRNTFDKAVLDVKLT----NPVRDINIK 104

Query: 359  418
           
Sbjct: 121  104

Query: 419  478
           
Sbjct: 181  104

Query: 479  538
           
Sbjct: 241  104

Query: 539  563
           
Sbjct: 301  104

[Close]

BLAST of MU51198 vs. TrEMBL
Match: K7MV80_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G281100 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.7e-43
Identity = 83/109 (76.15%), Postives = 102/109 (93.58%), Query Frame = 2


Query: 236 AMEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTT 295
           AMEHGS+TD++KSTFS+ DEDHT ANA+R+TLNQDPRV+FCGYSIPHPSDNRVNIRVQTT
Sbjct: 28  AMEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTT 87

Query: 296 GDPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE 355
           GDP+REVLKDACQ+LM++CQHVR+TFDKAV DF ++KA++  E D+++E
Sbjct: 88  GDPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISKARKNNE-DMDVE 135

Query: 356  415
           
Sbjct: 148  135

Query: 416  475
           
Sbjct: 208  135

Query: 476  535
           
Sbjct: 268  135

Query: 536  563
           
Sbjct: 328  135

[Close]

BLAST of MU51198 vs. TrEMBL
Match: A0A0B2PXJ1_GLYSO (DNA-directed RNA polymerases I and III subunit RPAC2 OS=Glycine soja GN=glysoja_016099 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.7e-43
Identity = 83/109 (76.15%), Postives = 102/109 (93.58%), Query Frame = 2


Query: 236 AMEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTT 295
           AMEHGS+TD++KSTFS+ DEDHT ANA+R+TLNQDPRV+FCGYSIPHPSDNRVNIRVQTT
Sbjct: 258 AMEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTT 317

Query: 296 GDPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE 355
           GDP+REVLKDACQ+LM++CQHVR+TFDKAV DF ++KA++  E D+++E
Sbjct: 318 GDPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISKARKNNE-DMDVE 365

Query: 356  415
           
Sbjct: 378  365

Query: 416  475
           
Sbjct: 438  365

Query: 476  535
           
Sbjct: 498  365

Query: 536  563
           
Sbjct: 558  365

[Close]

BLAST of MU51198 vs. TrEMBL
Match: C6T2I2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.2e-42
Identity = 82/108 (75.93%), Postives = 101/108 (93.52%), Query Frame = 2


Query: 239 MEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 298
           MEHGS+TD++KSTFS+ DEDHT ANA+R+TLNQDPRV+FCGYSIPHPSDNRVNIRVQTTG
Sbjct: 1   MEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTTG 60

Query: 299 DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE 358
           DP+REVLKDACQ+LM++CQHVR+TFDKAV DF ++KA++  E D+++E
Sbjct: 61  DPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISKARKNNE-DMDVE 107

Query: 359  418
           
Sbjct: 121  107

Query: 419  478
           
Sbjct: 181  107

Query: 479  538
           
Sbjct: 241  107

Query: 539  563
           
Sbjct: 301  107

[Close]

BLAST of MU51198 vs. TAIR10
Match: AT2G29540.3 (AT2G29540.3 RNApolymerase 14 kDa subunit)

HSP 1 Score: 89.4 bits (220), Expect = 3.4e-18
Identity = 45/69 (65.22%), Postives = 51/69 (73.91%), Query Frame = 2


Query: 341 PRVTFCGYSIPHPSDNRVNIRVQTTGDPAREVLKDACQNLMVVCQHVRNTFDKAVLDF-N 400
           PRVT   Y+IPHPS  +VNIRVQTTGDPAREV KDACQ LM + +HVR+ FDKAV ++ +
Sbjct: 52  PRVTVAAYTIPHPSLEQVNIRVQTTGDPAREVFKDACQELMQMNRHVRSVFDKAVAEYKD 111

Query: 401 LTKAKEEPE 460
             K KEE E
Sbjct: 112 EQKRKEEAE 120

Query: 461  520
           
Sbjct: 172  120

Query: 521  545
           
Sbjct: 232  120

[Close]

BLAST of MU51198 vs. NCBI nr
Match: gi|659115158|ref|XP_008457416.1| (PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2 [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 2.3e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 2


Query: 239 MEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 298
           MEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG
Sbjct: 1   MEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 299 DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE 358
           DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE
Sbjct: 61  DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE 108

Query: 359  418
           
Sbjct: 121  108

Query: 419  478
           
Sbjct: 181  108

Query: 479  538
           
Sbjct: 241  108

Query: 539  563
           
Sbjct: 301  108

[Close]

BLAST of MU51198 vs. NCBI nr
Match: gi|449455052|ref|XP_004145267.1| (PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 5.3e-53
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 2


Query: 239 MEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 298
           MEHGSFTDETKSTFSMADEDHTLANALR TLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG
Sbjct: 1   MEHGSFTDETKSTFSMADEDHTLANALRCTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 299 DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE 358
           DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTK KE+P GDINI+
Sbjct: 61  DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKPKEKPVGDINIK 108

Query: 359  418
           
Sbjct: 121  108

Query: 419  478
           
Sbjct: 181  108

Query: 479  538
           
Sbjct: 241  108

Query: 539  563
           
Sbjct: 301  108

[Close]

BLAST of MU51198 vs. NCBI nr
Match: gi|778659017|ref|XP_004147276.2| (PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 4.3e-47
Identity = 96/108 (88.89%), Postives = 98/108 (90.74%), Query Frame = 2


Query: 239 MEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 298
           MEHGSFTDETKSTFS+ADEDHTLAN LRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG
Sbjct: 1   MEHGSFTDETKSTFSVADEDHTLANTLRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 299 DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE 358
           DPAREVLKDACQNLMVVCQHVRNTFDKAVLD  LT     P  DINI+
Sbjct: 61  DPAREVLKDACQNLMVVCQHVRNTFDKAVLDVKLT----NPVRDINIK 104

Query: 359  418
           
Sbjct: 121  104

Query: 419  478
           
Sbjct: 181  104

Query: 479  538
           
Sbjct: 241  104

Query: 539  563
           
Sbjct: 301  104

[Close]

BLAST of MU51198 vs. NCBI nr
Match: gi|947051972|gb|KRH01501.1| (hypothetical protein GLYMA_18G281100 [Glycine max])

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43
Identity = 83/109 (76.15%), Postives = 102/109 (93.58%), Query Frame = 2


Query: 236 AMEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTT 295
           AMEHGS+TD++KSTFS+ DEDHT ANA+R+TLNQDPRV+FCGYSIPHPSDNRVNIRVQTT
Sbjct: 28  AMEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTT 87

Query: 296 GDPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE 355
           GDP+REVLKDACQ+LM++CQHVR+TFDKAV DF ++KA++  E D+++E
Sbjct: 88  GDPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISKARKNNE-DMDVE 135

Query: 356  415
           
Sbjct: 148  135

Query: 416  475
           
Sbjct: 208  135

Query: 476  535
           
Sbjct: 268  135

Query: 536  563
           
Sbjct: 328  135

[Close]

BLAST of MU51198 vs. NCBI nr
Match: gi|734354930|gb|KHN13815.1| (DNA-directed RNA polymerases I and III subunit RPAC2 [Glycine soja])

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43
Identity = 83/109 (76.15%), Postives = 102/109 (93.58%), Query Frame = 2


Query: 236 AMEHGSFTDETKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTT 295
           AMEHGS+TD++KSTFS+ DEDHT ANA+R+TLNQDPRV+FCGYSIPHPSDNRVNIRVQTT
Sbjct: 258 AMEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTT 317

Query: 296 GDPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKAKEEPEGDINIE 355
           GDP+REVLKDACQ+LM++CQHVR+TFDKAV DF ++KA++  E D+++E
Sbjct: 318 GDPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISKARKNNE-DMDVE 365

Query: 356  415
           
Sbjct: 378  365

Query: 416  475
           
Sbjct: 438  365

Query: 476  535
           
Sbjct: 498  365

Query: 536  563
           
Sbjct: 558  365

The following BLAST results are available for this feature:

BLAST of MU51198 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RPAC2_MOUSE	1.4e-16	42.72	DNA-directed RNA polymerases I and III subunit RPAC2 OS=Mus musculus GN=Polr1d P...	[more]
RPAC2_XENLA	1.4e-16	45.56	DNA-directed RNA polymerases I and III subunit RPAC2 OS=Xenopus laevis GN=polr1d...	[more]
RPAC2_HUMAN	2.3e-16	42.86	DNA-directed RNA polymerases I and III subunit RPAC2 OS=Homo sapiens GN=POLR1D P...	[more]
RPAC2_BOVIN	8.8e-16	41.84	DNA-directed RNA polymerases I and III subunit RPAC2 OS=Bos taurus GN=POLR1D PE=...	[more]
RPAC2_DANRE	8.8e-16	46.81	DNA-directed RNA polymerases I and III subunit RPAC2 OS=Danio rerio GN=polr1d PE...	[more]

BLAST of MU51198 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV21_CUCSA	1.4e-52	95.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527910 PE=4 SV=1	[more]
A0A0A0LUT5_CUCSA	8.7e-47	88.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G095010 PE=4 SV=1	[more]
K7MV80_SOYBN	7.7e-43	76.15	Uncharacterized protein OS=Glycine max GN=GLYMA_18G281100 PE=4 SV=1	[more]
A0A0B2PXJ1_GLYSO	7.7e-43	76.15	DNA-directed RNA polymerases I and III subunit RPAC2 OS=Glycine soja GN=glysoja_...	[more]
C6T2I2_SOYBN	2.2e-42	75.93	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]

BLAST of MU51198 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G29540.3	3.4e-18	65.22	RNApolymerase 14 kDa subunit	[more]

BLAST of MU51198 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115158\|ref\|XP_008457416.1\|	2.3e-56	100.00	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2 [Cucumis melo]	[more]
gi\|449455052\|ref\|XP_004145267.1\|	5.3e-53	95.37	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2 [Cucumis sativus...	[more]
gi\|778659017\|ref\|XP_004147276.2\|	4.3e-47	88.89	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2 [Cucumis sativus...	[more]
gi\|947051972\|gb\|KRH01501.1\|	3.8e-43	76.15	hypothetical protein GLYMA_18G281100 [Glycine max]	[more]
gi\|734354930\|gb\|KHN13815.1\|	3.8e-43	76.15	DNA-directed RNA polymerases I and III subunit RPAC2 [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR008193	RNA_pol_Rpb11_13-16kDa_CS
IPR009025	RBP11-like_dimer

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003899	DNA-directed RNA polymerase activity
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed RNA polymerase activity
molecular_function	GO:0046983	protein dimerization activity

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C020585	MELO3C020585	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
IA19YJ24FM1	IA19YJ24FM1	EST
IA23YE16FM1	IA23YE16FM1	EST
IA24YM22FM1	IA24YM22FM1	EST
IA25YE05FM1	IA25YE05FM1	EST
IA25YL20FM1	IA25YL20FM1	EST
IA27YN02FM1	IA27YN02FM1	EST
IA29YB24FM1	IA29YB24FM1	EST
IA3YL06FM1	IA3YL06FM1	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008193	DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site	PROSITE	PS01154	RNA_POL_L_13KD	coord: 16..47 scor
IPR009025	DNA-directed RNA polymerase, RBP11-like dimerisation domain	unknown	SSF55257	RBP11-like subunits of RNA polymerase	coord: 8..92 score: 7.72
None	No IPR available	GENE3D	G3DSA:3.30.1360.10		coord: 8..100 score: 3.1
None	No IPR available	PANTHER	PTHR13946	DNA-DIRECTED RNA POLYMERASE I,II,III	coord: 1..104 score: 6.3
None	No IPR available	PANTHER	PTHR13946:SF28	DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC2	coord: 1..104 score: 6.3
None	No IPR available	PFAM	PF13656	RNA_pol_L_2	coord: 12..83 score: 4.6