MU49584 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU49584
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Transmembrane protein, putative
Location	chr3 : 24227284 .. 24229902 (-)
Sequence length	973

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ATTGATTGCGTGGCTGACTTCCTGTGGAACCGAGCTCTTCCAATGGAGTCGTCGTCTTCCTCGTTTCCATCTTTCGAGTATTCTCTTTCTCATTGGGATTATCTCGACCTATACATACTACGTCCGATCCTCGCAATTCTGTTCACTTTCTCCTTGATTTCTCTCGGTTGGTTTTTGGCGTGGAAGCTTGTTCTCGTTCACGTCCCTCTGGTGCAGGAAATTTTTGGTCTACGTAAGAAACCTGCCAAGTCAAAACCTCCGACGCGCAGACTATCGAAGTTTTATGATAGTCTGAATTCCCAAACTTCGGCTTCTGGCTGATGTTTGAGCTTGGAGGCCATCTTAAATGAATTGCAGAACTTAAAACTAGGGAAGGAAAGCAGTTCTACTGGCCAATTGTTTGTGAGGACAAATTGAAAAGGTCCCGTTTCAAGCTTGAGATATGTATAGCTCATAGTGAAAGTTTGTTCATACCATTTTTTTAAATAGAAATGCACGTTTTCTGGTGGGATGACATTCTGACAGAAAATTGGATTAATTACCTATGTCAAACAATATATATGGTTCCAAGTTTGTTCGGATGACTTTTTCAGGTACTTAGAAATATAAAACAATTGATTACATTTTTAAGCATTTGGAAAGTTGTTCTAAACAGATTTTTTTGACACAAGGAATGGAGCAATGTCATGATCTCGGACCACCCAAGTCTAGATGGTGGATTATATTACCTATATCATGTGTATACCCAACATGTATGATCTCGCATAGTAAAACTTATGGAACTATGGTAGTAGTTTTTCACTCTATTCATATCGTTGGTGATGTATTGATAGTTTAGTGATAATTGGAATACATTTTTCTTAAAAGGTCAAGTTCTATTTTTCATTTCGAAATTGTTGTACAAAAGACTATCTTACCAAGTCTACAGTATGTATTATTGAATTTGACTAACAATAAAAAGAAAGACTTTCTC

Library


Library category	ESTs
melon 15d library	1
melon 46d library	3
melon MNFG2 library	1
melon MNR09P2 library	3
melon HS library	1
melon PS library	1

Homology

[Close]

BLAST of MU49584 vs. TrEMBL
Match: A0A0A0KH75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G399720 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1


Query: 91  HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR 150
           HWDYL+LYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR
Sbjct: 17  HWDYLNLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR 76

Query: 151 LSKFYDSLNSQTSASG 210
           LSKFYDSLNSQTSASG
Sbjct: 77  LSKFYDSLNSQTSASG 92

Query: 211  270
           
Sbjct: 137  92

Query: 271  319
           
Sbjct: 197  92

[Close]

BLAST of MU49584 vs. TrEMBL
Match: A0A061FGG1_THECC (Uncharacterized protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_035000 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 52/74 (70.27%), Postives = 65/74 (87.84%), Query Frame = 1


Query: 94  WDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRRL 153
           W+YL+L ++RPI+AI F  S I L W+LAWKLVLVHVPLVQEIFGLRKKP K KPPTRRL
Sbjct: 44  WNYLNLLLVRPIIAIFFVLSFIFLWWWLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRL 103

Query: 154 SKFYDSLNSQTSAS 213
           S++Y+S+N+Q+S+S
Sbjct: 104 SRYYNSINAQSSSS 117

Query: 214  273
           
Sbjct: 164  117

Query: 274  316
           
Sbjct: 224  117

[Close]

BLAST of MU49584 vs. TrEMBL
Match: A0A061FNP2_THECC (Uncharacterized protein isoform 5 (Fragment) OS=Theobroma cacao GN=TCM_035000 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 52/74 (70.27%), Postives = 65/74 (87.84%), Query Frame = 1


Query: 94  WDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRRL 153
           W+YL+L ++RPI+AI F  S I L W+LAWKLVLVHVPLVQEIFGLRKKP K KPPTRRL
Sbjct: 16  WNYLNLLLVRPIIAIFFVLSFIFLWWWLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRL 75

Query: 154 SKFYDSLNSQTSAS 213
           S++Y+S+N+Q+S+S
Sbjct: 76  SRYYNSINAQSSSS 89

Query: 214  273
           
Sbjct: 136  89

Query: 274  316
           
Sbjct: 196  89

[Close]

BLAST of MU49584 vs. TrEMBL
Match: A0A061FHH4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_035000 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 52/74 (70.27%), Postives = 65/74 (87.84%), Query Frame = 1


Query: 94  WDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRRL 153
           W+YL+L ++RPI+AI F  S I L W+LAWKLVLVHVPLVQEIFGLRKKP K KPPTRRL
Sbjct: 16  WNYLNLLLVRPIIAIFFVLSFIFLWWWLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRL 75

Query: 154 SKFYDSLNSQTSAS 213
           S++Y+S+N+Q+S+S
Sbjct: 76  SRYYNSINAQSSSS 89

Query: 214  273
           
Sbjct: 136  89

Query: 274  316
           
Sbjct: 196  89

[Close]

BLAST of MU49584 vs. TrEMBL
Match: A0A0D2QMB7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G241700 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.6e-22
Identity = 51/75 (68.00%), Postives = 62/75 (82.67%), Query Frame = 1


Query: 91  HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR 150
           +W+YL+  + RP+LA+LF  S I L W LAWKLVLVHVPLVQEIFGLRKKP K KPPTRR
Sbjct: 15  YWNYLNFLLFRPVLAVLFVLSFIILWWLLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRR 74

Query: 151 LSKFYDSLNSQTSAS 210
           LS++Y+S+NS +S S
Sbjct: 75  LSRYYNSINSHSSTS 89

Query: 211  270
           
Sbjct: 135  89

Query: 271  316
           
Sbjct: 195  89

[Close]

BLAST of MU49584 vs. TAIR10
Match: AT1G36380.1 (AT1G36380.1 unknown protein)

HSP 1 Score: 83.6 bits (205), Expect = 2.5e-16
Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 1


Query: 112 YILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTR-RLSKFYD 171
           +++RP+LAI F    I+L WFLAWKLVL HVPLVQEIFGLRKK    KP +R R++KFY 
Sbjct: 15  FLIRPLLAISFVICFIALWWFLAWKLVLSHVPLVQEIFGLRKKTFIPKPESRGRIAKFYK 74

Query: 172 SLNSQ 231
           S++SQ
Sbjct: 75  SISSQ 79

Query: 232  291
           
Sbjct: 135  79

Query: 292  304
           
Sbjct: 195  79

[Close]

BLAST of MU49584 vs. NCBI nr
Match: gi|659089174|ref|XP_008445365.1| (PREDICTED: uncharacterized protein LOC103488423 isoform X1 [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 6.1e-49
Identity = 107/113 (94.69%), Postives = 107/113 (94.69%), Query Frame = 1


Query: 91  HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR 150
           HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR
Sbjct: 17  HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR 76

Query: 151 LSKFYDSLNSQTSASG-----*CLSLEAILNELQNLKLGKESSSTGQLFVRTN 210
           LSKFYDSLNSQTSASG      CLSLEAILNELQNLKLGKESSSTGQLFVRTN
Sbjct: 77  LSKFYDSLNSQTSASGWFCVYRCLSLEAILNELQNLKLGKESSSTGQLFVRTN 129

Query: 211  270
           
Sbjct: 137  129

Query: 271  330
           
Sbjct: 197  129

Query: 331  390
           
Sbjct: 257  129

Query: 391  415
           
Sbjct: 317  129

[Close]

BLAST of MU49584 vs. NCBI nr
Match: gi|659089177|ref|XP_008445367.1| (PREDICTED: uncharacterized protein LOC103488423 isoform X2 [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1


Query: 91  HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR 150
           HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR
Sbjct: 17  HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR 76

Query: 151 LSKFYDSLNSQTSASG 210
           LSKFYDSLNSQTSASG
Sbjct: 77  LSKFYDSLNSQTSASG 92

Query: 211  270
           
Sbjct: 137  92

Query: 271  319
           
Sbjct: 197  92

[Close]

BLAST of MU49584 vs. NCBI nr
Match: gi|659089179|ref|XP_008445368.1| (PREDICTED: uncharacterized protein LOC103488423 isoform X3 [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1


Query: 91  HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR 150
           HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR
Sbjct: 17  HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR 76

Query: 151 LSKFYDSLNSQTSASG 210
           LSKFYDSLNSQTSASG
Sbjct: 77  LSKFYDSLNSQTSASG 92

Query: 211  270
           
Sbjct: 137  92

Query: 271  319
           
Sbjct: 197  92

[Close]

BLAST of MU49584 vs. NCBI nr
Match: gi|778715738|ref|XP_011657443.1| (PREDICTED: uncharacterized protein LOC101215134 isoform X1 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 4.7e-33
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1


Query: 91  HWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR 150
           HWDYL+LYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR
Sbjct: 17  HWDYLNLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRR 76

Query: 151 LSKFYDSLNSQTSASG 210
           LSKFYDSLNSQTSASG
Sbjct: 77  LSKFYDSLNSQTSASG 92

Query: 211  270
           
Sbjct: 137  92

Query: 271  319
           
Sbjct: 197  92

[Close]

BLAST of MU49584 vs. NCBI nr
Match: gi|1009136541|ref|XP_015885581.1| (PREDICTED: uncharacterized protein LOC107420988 [Ziziphus jujuba])

HSP 1 Score: 114.8 bits (286), Expect = 2.9e-22
Identity = 57/83 (68.67%), Postives = 68/83 (81.93%), Query Frame = 1


Query: 94  WDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPTRRL 153
           WDYL L++LRP+ A+LF F LISLGW LAWKLVLVHVPLVQEIFGLRKKP K KP TRRL
Sbjct: 15  WDYLSLFLLRPVSAVLFVFLLISLGWLLAWKLVLVHVPLVQEIFGLRKKPVKPKPLTRRL 74

Query: 154 SKFYDSLNSQTSASG*CLSLEAI 213
           SK Y +++S+ +ASG C+  + I
Sbjct: 75  SKIYSNIDSRKNASG-CICQDQI 96

Query: 214  273
           
Sbjct: 135  96

Query: 274  333
           
Sbjct: 195  96

Query: 334  343
           
Sbjct: 255  96

The following BLAST results are available for this feature:

BLAST of MU49584 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH75_CUCSA	1.0e-34	98.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G399720 PE=4 SV=1	[more]
A0A061FGG1_THECC	1.2e-22	70.27	Uncharacterized protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_035000 PE...	[more]
A0A061FNP2_THECC	1.2e-22	70.27	Uncharacterized protein isoform 5 (Fragment) OS=Theobroma cacao GN=TCM_035000 PE...	[more]
A0A061FHH4_THECC	1.2e-22	70.27	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_035000 PE=4 SV=1	[more]
A0A0D2QMB7_GOSRA	2.6e-22	68.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G241700 PE=4 SV=1	[more]

BLAST of MU49584 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G36380.1	2.5e-16	63.08	unknown protein	[more]

BLAST of MU49584 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089174\|ref\|XP_008445365.1\|	6.1e-49	94.69	PREDICTED: uncharacterized protein LOC103488423 isoform X1 [Cucumis melo]	[more]
gi\|659089177\|ref\|XP_008445367.1\|	1.2e-33	100.00	PREDICTED: uncharacterized protein LOC103488423 isoform X2 [Cucumis melo]	[more]
gi\|659089179\|ref\|XP_008445368.1\|	1.2e-33	100.00	PREDICTED: uncharacterized protein LOC103488423 isoform X3 [Cucumis melo]	[more]
gi\|778715738\|ref\|XP_011657443.1\|	4.7e-33	98.68	PREDICTED: uncharacterized protein LOC101215134 isoform X1 [Cucumis sativus]	[more]
gi\|1009136541\|ref\|XP_015885581.1\|	2.9e-22	68.67	PREDICTED: uncharacterized protein LOC107420988 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C011376	MELO3C011376	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
15D05A05	15D05A05	EST
46D01C09	46D01C09	EST
46D33F09	46D33F09	EST
46D40E03	46D40E03	EST
BA5YJ08FM1	BA5YJ08FM1	EST
CA10YI21FM1	CA10YI21FM1	EST
CA16YP09FM1	CA16YP09FM1	EST
CA16YP09RM1	CA16YP09RM1	EST
HS38A08	HS38A08	EST
PS20C06	PS20C06	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37192	FAMILY NOT NAMED	coord: 18..105 score: 4.2
None	No IPR available	PANTHER	PTHR37192:SF1	SUBFAMILY NOT NAMED	coord: 18..105 score: 4.2