MU49519 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU49519
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Transmembrane protein, putative
Location	chr6 : 9284032 .. 9284997 (+)
Sequence length	965

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ATCGATCATCATCTTCTCCAAAAATTATGGCGGTTGGAAATTTTAGAAATTGAAAACAACCCATATCTACCAAAACTTGGTTTTGCACTTCAGCACCACAATCAAGAAGATTTGACTGAAGGAGCGTGGCGTTTTCCGTATGAGAAGCAGCTCACGGTATGGGAATGGAGATGGCCACTGGAAGCACCAATCCCTATGCCAGTTAAGCAAATCCAATCTCTCTGAATCTCAATCCCTTCTTGAATTTCAAACTTTCCTCATGGAATTGCAATTGCCCTCCATTTATCTCCACTTCCCATTGCCTCTCTTGCTTCTCCCTTTCATTTTTGCAACAACCCATTTCGGGTTCCATTAATTCCCTCGAGTTTAGGAATTCGATCGGAAATTGTGGGTTGTTTTTCTTTTCCCCTTTTCCGGGTTCTTGAAATTCTGAAACTTTCTGGAGATCTCTGTTGATGTTCGATTTTAGCTCAGTGTAACTTGGGATGGATTGAGGGCTTGTTAAACGGTTTGGGATTTTTGGGTCGGGACCGAGGTTTAGGGTTTTTGACTGATCATGATCATCATCCTCTTGCTGTCAATTTACACATTGGATCTGGCAGAGTATTTTTGGTTCCTGGGTCTCTGTTTTTCCTTGGAGATTTACTTCTTCAAGGGACTCAATTGCGCTCCACTGGTAATTTGTTTCTGATTTGAAAAAGTAACTTTTAAGTGGGAAGTCAAATCAATGGCATCATCTGGGTTTTTCTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCTTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGCCATGGCCCTGAAACCGCAATCAAGCTCCAGGGATCTAGTCCCCACGATCAGCTTCTGATAAAGACATCTGATTCTTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCTTTTGTCA

Library


Library category	ESTs
melon AI library	1
melon MNFG2 library	1
melon VFLP2 library	4
melon PSI library	1

Homology

[Close]

BLAST of MU49519 vs. TrEMBL
Match: A0A0A0LAF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G232440 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 2


Query: 728 MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSD 787
           M SSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSD
Sbjct: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSD 59

Query: 788  847
           
Sbjct: 61   59

Query: 848  905
           
Sbjct: 121  59

[Close]

BLAST of MU49519 vs. TrEMBL
Match: D7T0E2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0265g00130 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-19
Identity = 53/83 (63.86%), Postives = 61/83 (73.49%), Query Frame = 2


Query: 719 VKSM-ASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIK 778
           V+SM +SSGFF+IC+LHS+IALTCG LMMFY  E+Y FGHGPETA KL GS+PHDQLLI+
Sbjct: 3   VQSMGSSSGFFVICLLHSIIALTCGGLMMFYMKEIYEFGHGPETATKLLGSTPHDQLLIR 62

Query: 779 TSDXXXXXXXXXXXXXXXMVAFV 838
           TSD               MVAFV
Sbjct: 63  TSDSFSGLLLFAIGFLLFMVAFV 85

Query: 839  898
           
Sbjct: 123  85

Query: 899  958
           
Sbjct: 183  85

Query: 959  965
           
Sbjct: 243  85

[Close]

BLAST of MU49519 vs. TrEMBL
Match: A5BT07_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027197 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.5e-19
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 2


Query: 728 MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDX 787
           M S+ FFL C+LHS+IALTCGALMMFY++E++VFGHGPE A KLQGS+PHDQLLI+TSD 
Sbjct: 1   MGSAAFFLTCILHSVIALTCGALMMFYTNEIFVFGHGPEIARKLQGSTPHDQLLIRTSDS 60

Query: 788 XXXXXXXXXXXXXXMVAFV 847
                         MVAFV
Sbjct: 61  FSGLLLFAIGFLLFMVAFV 79

Query: 848  907
           
Sbjct: 121  79

Query: 908  965
           
Sbjct: 181  79

[Close]

BLAST of MU49519 vs. TrEMBL
Match: A0A067K5H0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20994 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.6e-19
Identity = 52/79 (65.82%), Postives = 59/79 (74.68%), Query Frame = 2


Query: 728 MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDX 787
           M SSGF LICMLHSLIALTCGALM+FY++EVYVFGHG E A KL+GS+PHDQLLI+TS+ 
Sbjct: 1   MGSSGFSLICMLHSLIALTCGALMVFYTNEVYVFGHGVEVATKLKGSTPHDQLLIQTSES 60

Query: 788 XXXXXXXXXXXXXXMVAFV 847
                         MVAFV
Sbjct: 61  FSGLLLFAIGFLLFMVAFV 79

Query: 848  907
           
Sbjct: 121  79

Query: 908  965
           
Sbjct: 181  79

[Close]

BLAST of MU49519 vs. TrEMBL
Match: W9SMI9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021498 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 7.8e-19
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 2


Query: 728 MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDX 787
           M  SGFF++C+LHSL+ALTCG LMMFYS+E+Y+FGHG ETA KLQGS+PHDQLL +TSD 
Sbjct: 1   MGLSGFFVVCVLHSLVALTCGILMMFYSNELYIFGHGLETARKLQGSTPHDQLLFRTSDS 60

Query: 788 XXXXXXXXXXXXXXMVAFV 847
                         MVAFV
Sbjct: 61  FSGLLLFAIGFLLFMVAFV 79

Query: 848  907
           
Sbjct: 121  79

Query: 908  965
           
Sbjct: 181  79

[Close]

BLAST of MU49519 vs. TAIR10
Match: AT1G53035.1 (AT1G53035.1 unknown protein)

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13
Identity = 39/80 (48.75%), Postives = 48/80 (60.00%), Query Frame = 2


Query: 725 SMASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSD 784
           SM  S F +IC+LHS+IALT G LMMFY+ +  +FG G E A KL+GS+PHD+LLI+ S 
Sbjct: 6   SMNPSLFRVICILHSIIALTSGTLMMFYTEKASIFGPGSEIASKLKGSTPHDELLIQISQ 65

Query: 785 XXXXXXXXXXXXXXXMVAFV 844
                          MV+FV
Sbjct: 66  SFSGLLLFAIGLVLFMVSFV 85

Query: 845  904
           
Sbjct: 126  85

Query: 905  964
           
Sbjct: 186  85

[Close]

BLAST of MU49519 vs. TAIR10
Match: AT3G15358.1 (AT3G15358.1 unknown protein)

HSP 1 Score: 72.0 bits (175), Expect = 7.5e-13
Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 2


Query: 728 MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDX 787
           M S  F +IC+LHS+IALT G LMMFY+ +  +FGHG + A KL+GS+PHD+ LI+ S  
Sbjct: 1   MNSYLFRVICILHSIIALTSGTLMMFYTEKASIFGHGSDIANKLKGSTPHDEQLIQISQS 60

Query: 788 XXXXXXXXXXXXXXMVAFV 847
                         MV+FV
Sbjct: 61  FSGLLLFAIGLVLFMVSFV 79

Query: 848  907
           
Sbjct: 121  79

Query: 908  965
           
Sbjct: 181  79

[Close]

BLAST of MU49519 vs. NCBI nr
Match: gi|659112034|ref|XP_008456033.1| (PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo])

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-25
Identity = 64/79 (81.01%), Postives = 64/79 (81.01%), Query Frame = 2


Query: 728 MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDX 787
           MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSD 
Sbjct: 1   MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60

Query: 788 XXXXXXXXXXXXXXMVAFV 847
                         MVAFV
Sbjct: 61  FSGLLLFTVGFLLFMVAFV 79

Query: 848  907
           
Sbjct: 121  79

Query: 908  965
           
Sbjct: 181  79

[Close]

BLAST of MU49519 vs. NCBI nr
Match: gi|778680327|ref|XP_011651290.1| (PREDICTED: uncharacterized protein LOC101222658 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 3.0e-24
Identity = 62/79 (78.48%), Postives = 62/79 (78.48%), Query Frame = 2


Query: 728 MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDX 787
           M SSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSD 
Sbjct: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60

Query: 788 XXXXXXXXXXXXXXMVAFV 847
                         MVAFV
Sbjct: 61  FSGLLLFTVGLLLFMVAFV 79

Query: 848  907
           
Sbjct: 121  79

Query: 908  965
           
Sbjct: 181  79

[Close]

BLAST of MU49519 vs. NCBI nr
Match: gi|700202489|gb|KGN57622.1| (hypothetical protein Csa_3G232440 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 2.6e-23
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 2


Query: 728 MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSD 787
           M SSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSD
Sbjct: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSD 59

Query: 788  847
           
Sbjct: 61   59

Query: 848  905
           
Sbjct: 121  59

[Close]

BLAST of MU49519 vs. NCBI nr
Match: gi|1009139855|ref|XP_015887338.1| (PREDICTED: uncharacterized protein LOC107422415 [Ziziphus jujuba])

HSP 1 Score: 107.1 bits (266), Expect = 5.9e-20
Identity = 52/79 (65.82%), Postives = 59/79 (74.68%), Query Frame = 2


Query: 728 MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDX 787
           M+ SGFFL+CMLHSL+ALTCGALMMFYS+E Y FGHG ETA KLQGS+PHDQLL++TSD 
Sbjct: 1   MSLSGFFLVCMLHSLVALTCGALMMFYSNEFYAFGHGSETAHKLQGSTPHDQLLVRTSDS 60

Query: 788 XXXXXXXXXXXXXXMVAFV 847
                         MVAFV
Sbjct: 61  FSGLLLFVIGCLLFMVAFV 79

Query: 848  907
           
Sbjct: 121  79

Query: 908  965
           
Sbjct: 181  79

[Close]

BLAST of MU49519 vs. NCBI nr
Match: gi|297735997|emb|CBI23971.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 104.4 bits (259), Expect = 3.8e-19
Identity = 53/83 (63.86%), Postives = 61/83 (73.49%), Query Frame = 2


Query: 719 VKSM-ASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIK 778
           V+SM +SSGFF+IC+LHS+IALTCG LMMFY  E+Y FGHGPETA KL GS+PHDQLLI+
Sbjct: 3   VQSMGSSSGFFVICLLHSIIALTCGGLMMFYMKEIYEFGHGPETATKLLGSTPHDQLLIR 62

Query: 779 TSDXXXXXXXXXXXXXXXMVAFV 838
           TSD               MVAFV
Sbjct: 63  TSDSFSGLLLFAIGFLLFMVAFV 85

Query: 839  898
           
Sbjct: 123  85

Query: 899  958
           
Sbjct: 183  85

Query: 959  965
           
Sbjct: 243  85

The following BLAST results are available for this feature:

BLAST of MU49519 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAF1_CUCSA	1.1e-23	96.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G232440 PE=4 SV=1	[more]
D7T0E2_VITVI	2.1e-19	63.86	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0265g00130 PE=4 SV=...	[more]
A5BT07_VITVI	3.5e-19	63.29	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027197 PE=4 SV=1	[more]
A0A067K5H0_JATCU	4.6e-19	65.82	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20994 PE=4 SV=1	[more]
W9SMI9_9ROSA	7.8e-19	62.03	Uncharacterized protein OS=Morus notabilis GN=L484_021498 PE=4 SV=1	[more]

BLAST of MU49519 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53035.1	2.0e-13	48.75	unknown protein	[more]
AT3G15358.1	7.5e-13	46.84	unknown protein	[more]

BLAST of MU49519 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112034\|ref\|XP_008456033.1\|	1.2e-25	81.01	PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]	[more]
gi\|778680327\|ref\|XP_011651290.1\|	3.0e-24	78.48	PREDICTED: uncharacterized protein LOC101222658 [Cucumis sativus]	[more]
gi\|700202489\|gb\|KGN57622.1\|	2.6e-23	96.61	hypothetical protein Csa_3G232440 [Cucumis sativus]	[more]
gi\|1009139855\|ref\|XP_015887338.1\|	5.9e-20	65.82	PREDICTED: uncharacterized protein LOC107422415 [Ziziphus jujuba]	[more]
gi\|297735997\|emb\|CBI23971.3\|	3.8e-19	63.86	unnamed protein product [Vitis vinifera]	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C019413	MELO3C019413	gene
MELO3C019412	MELO3C019412	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
AI11H03	AI11H03	EST
BA16YL12FM1	BA16YL12FM1	EST
GA12YM07FM1	GA12YM07FM1	EST
GA37YM07FM2	GA37YM07FM2	EST
GA45YE14FM1	GA45YE14FM1	EST
GA53YI21FM1	GA53YI21FM1	EST
PSI05F10	PSI05F10	EST