MU49437 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU49437
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Trafficking protein particle complex subunit 2
Location	chr11 : 74838 .. 79277 (+)
Sequence length	741

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AGAGACCTTCCGAATTGCTACTCAGAATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGACTATACTCAATCCTCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTTCGCGCACTCGCAAGGAAGTATCTCTAGTCATCACCTTCATTGCAGACCAAATGTGCTTTCATGACAATGCTTCGAAGTTTATAGTAGCCCTAAGTTTTCTTTTAACTGTACAACATTTTAATCTTTGCCATTTGTGGTCCTGACATCAATCAATTCAGTAGTTAAATAATTCTCAATGTGTAATATTGACTTTGGAATGGCTTGGTTACGAGTTGGAATTGCACTTCACAGTAATGCGTTTTGCCCTTTTTACTCATCTTTTGTTGTAGAGAGTACTATCATTATTTGTTGTTATATTCTATAAGGCAGTGGATATGGGATATTAAAGTTGTGT

Library


Library category	ESTs
melon 46d library	1
melon A library	2
melon AI library	2
melon MNFG2 library	1
melon PFLP2 library	1
melon VFLP2 library	1
melon HS library	1

Homology

[Close]

BLAST of MU49437 vs. Swiss-Prot
Match: TPPC2_CANLF (Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris GN=TRAPPC2 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-31
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 86
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 87  LKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR 146
           LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF +V++LYIK  +NP Y P S 
Sbjct: 61  LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120

Query: 147 ITSSHFDTKVRALARKYL 206
           I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138

Query: 207  266
           
Sbjct: 181  138

Query: 267  326
           
Sbjct: 241  138

Query: 327  386
           
Sbjct: 301  138

Query: 387  432
           
Sbjct: 361  138

[Close]

BLAST of MU49437 vs. Swiss-Prot
Match: TPPC2_PIG (Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-31
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 86
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 87  LKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR 146
           LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF +V++LYIK  +NP Y P S 
Sbjct: 61  LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120

Query: 147 ITSSHFDTKVRALARKYL 206
           I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138

Query: 207  266
           
Sbjct: 181  138

Query: 267  326
           
Sbjct: 241  138

Query: 327  386
           
Sbjct: 301  138

Query: 387  432
           
Sbjct: 361  138

[Close]

BLAST of MU49437 vs. Swiss-Prot
Match: TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-31
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 86
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 87  LKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR 146
           LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF +V++LYIK  +NP Y P S 
Sbjct: 61  LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120

Query: 147 ITSSHFDTKVRALARKYL 206
           I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138

Query: 207  266
           
Sbjct: 181  138

Query: 267  326
           
Sbjct: 241  138

Query: 327  386
           
Sbjct: 301  138

Query: 387  432
           
Sbjct: 361  138

[Close]

BLAST of MU49437 vs. Swiss-Prot
Match: TPPC2_MOUSE (Trafficking protein particle complex subunit 2 OS=Mus musculus GN=Trappc2 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 9.8e-31
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEV---GSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 86
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 87  LKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR 146
           LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF +V++LYIK  +NP Y P S 
Sbjct: 61  LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120

Query: 147 ITSSHFDTKVRALARKYL 206
           I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138

Query: 207  266
           
Sbjct: 181  138

Query: 267  326
           
Sbjct: 241  138

Query: 327  386
           
Sbjct: 301  138

Query: 387  432
           
Sbjct: 361  138

[Close]

BLAST of MU49437 vs. Swiss-Prot
Match: TPC2B_HUMAN (Trafficking protein particle complex subunit 2B OS=Homo sapiens GN=TRAPPC2B PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 9.8e-31
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 86
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 87  LKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR 146
           LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF +V++LYIK  +NP Y P S 
Sbjct: 61  LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSP 120

Query: 147 ITSSHFDTKVRALARKYL 206
           I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138

Query: 207  266
           
Sbjct: 181  138

Query: 267  326
           
Sbjct: 241  138

Query: 327  386
           
Sbjct: 301  138

Query: 387  432
           
Sbjct: 361  138

[Close]

BLAST of MU49437 vs. TrEMBL
Match: M5XZB8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013209mg PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.1e-65
Identity = 126/135 (93.33%), Postives = 133/135 (98.52%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 86
           MA TACF+IVSRN+IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAM+LKA
Sbjct: 1   MATTACFVIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMYLKA 60

Query: 87  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 146
           +DRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKT+LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTLLNPLYLPGSRITS 120

Query: 147 SHFDTKVRALARKYL 206
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

Query: 207  266
           
Sbjct: 181  135

Query: 267  326
           
Sbjct: 241  135

Query: 327  386
           
Sbjct: 301  135

Query: 387  432
           
Sbjct: 361  135

[Close]

BLAST of MU49437 vs. TrEMBL
Match: A0A067FL79_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.5e-65
Identity = 127/135 (94.07%), Postives = 131/135 (97.04%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 86
           MA TACFIIVSRN IPIYEAEVGSAVKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 87  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 146
           +DRFNDLVVSVYVTAGHTR MLLHDSRNDDGIKSFFQEVHELYIK +LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 147 SHFDTKVRALARKYL 206
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

Query: 207  266
           
Sbjct: 181  135

Query: 267  326
           
Sbjct: 241  135

Query: 327  386
           
Sbjct: 301  135

Query: 387  432
           
Sbjct: 361  135

[Close]

BLAST of MU49437 vs. TrEMBL
Match: A0A061EJF7_THECC (SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.2e-65
Identity = 126/135 (93.33%), Postives = 131/135 (97.04%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 86
           MA TACFIIVSRN+IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 87  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 146
           +DRFNDLVVSVYVTAGHTR MLLHDSRNDDGIKSFFQEVHELYIK +LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKVLLNPLYLPGSRITS 120

Query: 147 SHFDTKVRALARKYL 206
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

Query: 207  266
           
Sbjct: 181  135

Query: 267  326
           
Sbjct: 241  135

Query: 327  386
           
Sbjct: 301  135

Query: 387  432
           
Sbjct: 361  135

[Close]

BLAST of MU49437 vs. TrEMBL
Match: A0A061EID8_THECC (SNARE-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 5.5e-65
Identity = 126/135 (93.33%), Postives = 131/135 (97.04%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 86
           MA TACFIIVSRN+IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 87  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 146
           +DRFNDLVVSVYVTAGHTR MLLHDSRNDDGIKSFFQEVHELYIK +LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 147 SHFDTKVRALARKYL 206
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

Query: 207  266
           
Sbjct: 181  135

Query: 267  326
           
Sbjct: 241  135

Query: 327  386
           
Sbjct: 301  135

Query: 387  432
           
Sbjct: 361  135

[Close]

BLAST of MU49437 vs. TrEMBL
Match: V4LIF4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10001067mg PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 7.2e-65
Identity = 125/135 (92.59%), Postives = 132/135 (97.78%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 86
           MANTACFIIV RN+IPIYEAEVGSA KRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+
Sbjct: 1   MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 87  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 146
           VDRFNDLVVSVYVTAGHTRLMLLHDSRN+DGIKSFFQEVHELYIK +LNPLYLPGSRITS
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 147 SHFDTKVRALARKYL 206
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

Query: 207  266
           
Sbjct: 181  135

Query: 267  326
           
Sbjct: 241  135

Query: 327  386
           
Sbjct: 301  135

Query: 387  432
           
Sbjct: 361  135

[Close]

BLAST of MU49437 vs. TAIR10
Match: AT1G80500.1 (AT1G80500.1 SNARE-like superfamily protein)

HSP 1 Score: 255.4 bits (651), Expect = 3.6e-68
Identity = 125/135 (92.59%), Postives = 130/135 (96.30%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 86
           MANTACFIIV RN+IPIYEAEVGSA KRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+
Sbjct: 1   MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 87  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 146
           VDRFNDLVVSVYVTAGHTRLMLLHDSRN+DGIKSFFQEVHELYIK +LNPLYLPGSRITS
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 147 SHFDTKVRALARKYL 206
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

Query: 207  266
           
Sbjct: 181  135

Query: 267  326
           
Sbjct: 241  135

Query: 327  386
           
Sbjct: 301  135

Query: 387  432
           
Sbjct: 361  135

[Close]

BLAST of MU49437 vs. TAIR10
Match: AT2G20930.1 (AT2G20930.1 SNARE-like superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 3.2e-08
Identity = 37/138 (26.81%), Postives = 66/138 (47.83%), Query Frame = 3


Query: 42  CFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLA-------WTTSAMFL 101
           C  +V   N P+Y   + S    +D+ +LH  I+H SLD++++          T +  FL
Sbjct: 4   CVAVVGHQNNPLY---IQSFTDADDALKLHH-IVHCSLDVIEERVNNPKKSGTTLNEAFL 63

Query: 102 KAVDRFNDLVVSVYVTAGHTRLMLLHDSRN--DDGIKSFFQEVHELYIKTILNPLYLPGS 161
             +    +  V  Y+T    + +L+    +  D  ++SFF++ H  Y+  + NP ++PG 
Sbjct: 64  GLLYPTVNYKVYGYLTNTKVKFILVTTDLDVRDTDVRSFFRKFHAAYVDAVSNPFHVPGK 123

Query: 162 RITSSHFDTKVRALARKY 221
           +ITS  F   V  +   Y
Sbjct: 124 KITSRTFAQTVSNIVGSY 137

Query: 222  281
           
Sbjct: 184  137

Query: 282  341
           
Sbjct: 244  137

Query: 342  401
           
Sbjct: 304  137

Query: 402  429
           
Sbjct: 364  137

[Close]

BLAST of MU49437 vs. NCBI nr
Match: gi|659121801|ref|XP_008460820.1| (PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo])

HSP 1 Score: 271.6 bits (693), Expect = 1.4e-69
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 86
           MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 87  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 146
           VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120

Query: 147 SHFDTKVRALARKYL 206
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

Query: 207  266
           
Sbjct: 181  135

Query: 267  326
           
Sbjct: 241  135

Query: 327  386
           
Sbjct: 301  135

Query: 387  432
           
Sbjct: 361  135

[Close]

BLAST of MU49437 vs. NCBI nr
Match: gi|449459192|ref|XP_004147330.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 9.0e-69
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 86
           MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 87  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 146
           VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR+TS
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTS 120

Query: 147 SHFDTKVRALARKYL 206
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

Query: 207  266
           
Sbjct: 181  135

Query: 267  326
           
Sbjct: 241  135

Query: 327  386
           
Sbjct: 301  135

Query: 387  432
           
Sbjct: 361  135

[Close]

BLAST of MU49437 vs. NCBI nr
Match: gi|778670342|ref|XP_011649448.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X1 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 2.2e-67
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 86
           MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 87  VDRFNDLVVSVYVTAG-HTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRIT 146
           VDRFNDLVVSVYVTAG HTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR+T
Sbjct: 61  VDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVT 120

Query: 147 SSHFDTKVRALARKYL 206
           SSHFDTKVRALARKYL
Sbjct: 121 SSHFDTKVRALARKYL 136

Query: 207  266
           
Sbjct: 181  136

Query: 267  326
           
Sbjct: 241  136

Query: 327  386
           
Sbjct: 301  136

Query: 387  432
           
Sbjct: 361  136

[Close]

BLAST of MU49437 vs. NCBI nr
Match: gi|596289200|ref|XP_007226059.1| (hypothetical protein PRUPE_ppa013209mg [Prunus persica])

HSP 1 Score: 260.8 bits (665), Expect = 2.5e-66
Identity = 126/135 (93.33%), Postives = 133/135 (98.52%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 86
           MA TACF+IVSRN+IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAM+LKA
Sbjct: 1   MATTACFVIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMYLKA 60

Query: 87  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 146
           +DRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKT+LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTLLNPLYLPGSRITS 120

Query: 147 SHFDTKVRALARKYL 206
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

Query: 207  266
           
Sbjct: 181  135

Query: 267  326
           
Sbjct: 241  135

Query: 327  386
           
Sbjct: 301  135

Query: 387  432
           
Sbjct: 361  135

[Close]

BLAST of MU49437 vs. NCBI nr
Match: gi|568882443|ref|XP_006494040.1| (PREDICTED: trafficking protein particle complex subunit 2 [Citrus sinensis])

HSP 1 Score: 260.4 bits (664), Expect = 3.2e-66
Identity = 127/135 (94.07%), Postives = 132/135 (97.78%), Query Frame = 3


Query: 27  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 86
           MA TACFIIVSRN IPIYEAEVGSAVKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 87  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 146
           +DRFNDLVVSVYVTAGHTR MLLHDSRNDDGIKSFFQEVHELYIK++LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKSLLNPLYLPGSRITS 120

Query: 147 SHFDTKVRALARKYL 206
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

Query: 207  266
           
Sbjct: 181  135

Query: 267  326
           
Sbjct: 241  135

Query: 327  386
           
Sbjct: 301  135

Query: 387  432
           
Sbjct: 361  135

The following BLAST results are available for this feature:

BLAST of MU49437 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TPPC2_CANLF	7.5e-31	47.10	Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris GN=TRAP...	[more]
TPPC2_PIG	7.5e-31	47.10	Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=...	[more]
TPPC2_BOVIN	7.5e-31	47.10	Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=...	[more]
TPPC2_MOUSE	9.8e-31	47.10	Trafficking protein particle complex subunit 2 OS=Mus musculus GN=Trappc2 PE=1 S...	[more]
TPC2B_HUMAN	9.8e-31	47.10	Trafficking protein particle complex subunit 2B OS=Homo sapiens GN=TRAPPC2B PE=1...	[more]

BLAST of MU49437 vs. TrEMBL


Match Name	E-value	Identity	Description
M5XZB8_PRUPE	1.1e-65	93.33	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013209mg PE=4 SV=1	[more]
A0A067FL79_CITSI	2.5e-65	94.07	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1	[more]
A0A061EJF7_THECC	4.2e-65	93.33	SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019945 PE=4 S...	[more]
A0A061EID8_THECC	5.5e-65	93.33	SNARE-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_019945 PE=4 S...	[more]
V4LIF4_EUTSA	7.2e-65	92.59	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10001067mg PE=4 SV=1	[more]

BLAST of MU49437 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80500.1	3.6e-68	92.59	SNARE-like superfamily protein	[more]
AT2G20930.1	3.2e-08	26.81	SNARE-like superfamily protein	[more]

BLAST of MU49437 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121801\|ref\|XP_008460820.1\|	1.4e-69	100.00	PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo]	[more]
gi\|449459192\|ref\|XP_004147330.1\|	9.0e-69	98.52	PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus...	[more]
gi\|778670342\|ref\|XP_011649448.1\|	2.2e-67	97.79	PREDICTED: transport protein particle 20 kDa subunit isoform X1 [Cucumis sativus...	[more]
gi\|596289200\|ref\|XP_007226059.1\|	2.5e-66	93.33	hypothetical protein PRUPE_ppa013209mg [Prunus persica]	[more]
gi\|568882443\|ref\|XP_006494040.1\|	3.2e-66	94.07	PREDICTED: trafficking protein particle complex subunit 2 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR006722	Sedlin
IPR011012	Longin-like_dom_sf

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006888	ER to Golgi vesicle-mediated transport
GO:0006810	transport

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006810	transport
cellular_component	GO:0005622	intracellular

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C023193	MELO3C023193	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
46D18C01	46D18C01	EST
A10E08	A10E08	EST
A28E07	A28E07	EST
AI29H03	AI29H03	EST
AI33G02	AI33G02	EST
BA15YG07FM1	BA15YG07FM1	EST
DA7YH06FM1	DA7YH06FM1	EST
GA25YB14FM1	GA25YB14FM1	EST
HS33C11	HS33C11	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006722	Trafficking protein particle complex subunit 2	PANTHER	PTHR12403	MBP-1 INTERACTING PROTEIN-2A	coord: 1..135 score: 2.3
IPR006722	Trafficking protein particle complex subunit 2	PFAM	PF04628	Sedlin_N	coord: 9..133 score: 7.8
IPR011012	Longin-like domain	unknown	SSF64356	SNARE-like	coord: 1..135 score: 1.83
None	No IPR available	GENE3D	G3DSA:3.30.450.70		coord: 3..135 score: 9.6
None	No IPR available	PANTHER	PTHR12403:SF14	SUBFAMILY NOT NAMED	coord: 1..135 score: 2.3