MU49370 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU49370
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Unknown protein
Location	chr6 : 2220465 .. 2221521 (-)
Sequence length	1057

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AGCGGCAAAGAGGGCAAGTTGAGTGAGATTTAAGCCATGTGTCGATGCAAGGAAGATGAAAGGCATGGCTACACTTTGGGAGCAATCTTAAGCTCTCATTTTCTTCAAACTCACTCAAGCAAACTGAGCAATCAGTGCCTTCAACTAACCCATCTCCTCTTTTGTACTTGCAGACTGTGATGGACTTGATGAGAGCTTCATCCAAGCCAGGAGGAGGAAGAGGAGGGGCTTGGAGCTGGTTTTCATGACGGATTTGGGAAAGATTTTCTTCATCCTCCATTTCCATGGCGTCGTTGCTGGTGGAAGCTCTGTTCCTGCAGTACTCGGAGATGATGGTGTAATAGCTTACCAAAATGAAGGCACTAGCCAAAATACCAATGATAGCGATGATAAGAGGAGAGAAATCAGTGGCAGAATCTCCATTGCTGCCATAGCCAAAAGGTGGAGGTGGTGGAAAGATGATGTAACACCATTGAGGACAATATATGCTGCAAATCTCTAAAGAACAGTCTTTGTAAGCATATGGCTGCCATTGATTTGAGTTTCCTACTGAACCCATTTTCCTCTACCACTTGTAGATATTGCAGGTACCTCTATTTTCTCTTTTTTCATGTGTTTATGGGGTAGAAAGAGAGTTTGATTGGAGATGCAGGGCAGAAGAAAAAGAAAGCTAAATTAGGGGCTTTGATGCAAAGGGAAGGAAAGTGGGAGGAGGTAAGAAATTGTTATATCTCATTTATCCTCTCTCTCTCTCTTCTTTTTCTTTTTTCTTAATTCTTGTCCTTTCCTTTTACTTTTCCCTTTTCAACTTCCTTCTACTTCACAAACATGTCTTCAACAAAGAAATGGTGTCAATATTAGGCCTGTCTAAATTCCTTGTGTGAGACTTTAGGTTTTGATATCAAGTTTTCCATTGACAAAGGGAAGGAAGATGAGTGTAGGTGTGGGTTTGATAAAAGCTAAGTGAATTCTAAGAAATAAAAGTTGGTGAATTTAGGTAAGACAATCCCTTGGAACCATAGTTTTCTTTTTCCATCAATTCATGCTATTTTTTGTA

Library


Library category	ESTs
melon 15d library	2

Homology

[Close]

BLAST of MU49370 vs. Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.0e-45
Identity = 94/185 (50.81%), Postives = 114/185 (61.62%), Query Frame = -1


Query: 2   NSNQWQPY-AYKDCSLEICSIYCPQWCXXXXXXXXXXXXXSN--GDSATDFSPXXXXXXX 61
           N N W PY +Y DCS  IC+IYCPQWC              +    S++ FSP       
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 62  XXXXXXXXVSYYTIISEYC-RNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXXXGLDE 121
                   VSYYT+IS+YC R+  ++S++ + +    N +     +  Q       GL+E
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQTSSSETLNL----NHNGEGFFSSTQRISTNGDGLNE 123

Query: 122 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 181
           ++IKSITV KYK GDG V+G+DCSVCLSEFEENESLRLLPKC+HAFHLPCIDTWLKSHS 
Sbjct: 124 SMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSN 183

Query: 182 CPLCR 241
           CPLCR
Sbjct: 184 CPLCR 184

Query: 242  301
           
Sbjct: 244  184

Query: 302  361
           
Sbjct: 304  184

Query: 362  421
           
Sbjct: 364  184

Query: 422  481
           
Sbjct: 424  184

Query: 482  541
           
Sbjct: 484  184

Query: 542  545
           
Sbjct: 544  184

[Close]

BLAST of MU49370 vs. Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 3.4e-45
Identity = 98/201 (48.76%), Postives = 115/201 (57.21%), Query Frame = -1


Query: 2   MGSVGNSNQWQPY--AYKDCSLEICSIYCPQWCXXXXXXXXXXXXXSNGD-SATDFSPXX 61
           MGS GN N W     +Y+DCS  +CS+YCPQWC                D S++DFSP  
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 62  XXXXXXXXXXXXXVSYYTIISEYC----RNRASTSNDAMEMEDEENLSQIRHENQLQA-- 121
                        VSYYT+IS+YC     N +STS  A+     +   Q  + N      
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 122 ------XXXXXXGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 181
                       GLDE+LIKSITV KY++ DG VE +DCSVCLSEF+ENESLRLLPKC+H
Sbjct: 121 NPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 182 AFHLPCIDTWLKSHSTCPLCR 241
           AFH+PCIDTWLKSHS CPLCR
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCR 201

Query: 242  301
           
Sbjct: 241  201

Query: 302  361
           
Sbjct: 301  201

Query: 362  421
           
Sbjct: 361  201

Query: 422  481
           
Sbjct: 421  201

Query: 482  541
           
Sbjct: 481  201

Query: 542  560
           
Sbjct: 541  201

[Close]

BLAST of MU49370 vs. Swiss-Prot
Match: ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 2.9e-36
Identity = 90/194 (46.39%), Postives = 97/194 (50.00%), Query Frame = -1


Query: 2   WQPYA-YKDCSLEICSIYCPQWCXXXXXXXXXXXXXSNGDSATD-----FSPXXXXXXXX 61
           W PY   +DCS  +CS+YCPQWC               G SA D     FSP        
Sbjct: 8   WVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVA--GTSADDSSGPVFSPLVIAIIGV 67

Query: 62  XXXXXXXVSYYTIISEYC------RNRASTSNDAMEMEDEENLSQIRH-----ENQLQAX 121
                  VSYYT IS+YC      R R   S+           S  RH      +     
Sbjct: 68  LASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWN 127

Query: 122 XXXXXGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCI 181
                GLDE LI  ITVCKY+RGDG V  TDCSVCL EF + ESLRLLP+CSHAFH  CI
Sbjct: 128 VSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCI 187

Query: 182 DTWLKSHSTCPLCR 241
           DTWLKSHS CPLCR
Sbjct: 188 DTWLKSHSNCPLCR 199

Query: 242  301
           
Sbjct: 248  199

Query: 302  361
           
Sbjct: 308  199

Query: 362  421
           
Sbjct: 368  199

Query: 422  481
           
Sbjct: 428  199

Query: 482  533
           
Sbjct: 488  199

[Close]

BLAST of MU49370 vs. Swiss-Prot
Match: ATL53_ARATH (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana GN=ATL53 PE=3 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-28
Identity = 73/197 (37.06%), Postives = 98/197 (49.75%), Query Frame = -1


Query: 2   MGSVGNSNQWQPYAY-KDCSLEICSIYCPQWCXXXXXXXXXXXXXS--NGDSATD--FSP 61
           M S  N + W  Y   +DC+  +CS +CPQWC                N   A++   SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 62  XXXXXXXXXXXXXXXVSYYTIISEYCRN----RASTSNDAMEMEDEENLSQIRHENQLQA 121
                           +YYT++S+YC N     A++ +   ++  + N  +   ++   A
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 122 XXXXXXGLDEALIKSITVCKYKRGDG--LVEGTDCSVCLSEFEENESLRLLPKCSHAFHL 181
                 GLD+ LIK I   K K+      + GTDCS+CL EF E+ESLRLLPKC+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 182 PCIDTWLKSHSTCPLCR 241
            CID WLKSHS CPLCR
Sbjct: 181 VCIDRWLKSHSNCPLCR 197

Query: 242  301
           
Sbjct: 241  197

Query: 302  361
           
Sbjct: 301  197

Query: 362  421
           
Sbjct: 361  197

Query: 422  481
           
Sbjct: 421  197

Query: 482  541
           
Sbjct: 481  197

Query: 542  560
           
Sbjct: 541  197

[Close]

BLAST of MU49370 vs. Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 6.5e-28
Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = -1


Query: 2   NDAMEMEDEENLSQIRHENQLQAXXXXXXGLDEALIKSITVCKYKRGDGLVEGTDCSVCL 61
           ND +  E+ ++  Q+ H   L        GL +++I SIT+C YKRGDGL+E TDC VCL
Sbjct: 126 NDTVMEEEFQDREQVDHPIWL----IRTTGLQQSIINSITICNYKRGDGLIERTDCPVCL 185

Query: 62  SEFEENESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCR 121
           +EFEE+ESLRLLPKC+HAFH+ CIDTWL SH+ CPLCR
Sbjct: 186 NEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219

Query: 122  181
           
Sbjct: 246  219

Query: 182  241
           
Sbjct: 306  219

Query: 242  296
           
Sbjct: 366  219

[Close]

BLAST of MU49370 vs. TrEMBL
Match: A0A0A0L405_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129520 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.6e-81
Identity = 149/186 (80.11%), Postives = 152/186 (81.72%), Query Frame = -1


Query: 2   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCXXXXXXXXXXXXXSNGDSATDFSPXXXXX 61
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWC             SNGDSATDFSP     
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 62  XXXXXXXXXXVSYYTIISEYCRNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXXXGLD 121
                     VSYYTIIS+YCRNRASTSNDAMEMEDEEN+SQIRHENQLQA      GLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENISQIRHENQLQAPPLPPPGLD 120

Query: 122 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 181
           EALIKSITVCKYKRGDGLVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 182 TCPLCR 241
           TCPLCR
Sbjct: 181 TCPLCR 186

Query: 242  301
           
Sbjct: 241  186

Query: 302  361
           
Sbjct: 301  186

Query: 362  421
           
Sbjct: 361  186

Query: 422  481
           
Sbjct: 421  186

Query: 482  541
           
Sbjct: 481  186

Query: 542  560
           
Sbjct: 541  186

[Close]

BLAST of MU49370 vs. TrEMBL
Match: K4AXZ6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 7.7e-52
Identity = 106/187 (56.68%), Postives = 125/187 (66.84%), Query Frame = -1


Query: 2   MGSVGNSNQWQPY-AYKDCSLEICSIYCPQWCXXXXXXXXXXXXXSNGDSATDFSPXXXX 61
           MGS+GN+N W PY +YKDCS  ICS+YCPQWC             ++ DSAT FSP    
Sbjct: 1   MGSIGNTNPWAPYDSYKDCSQGICSVYCPQWCYFLLPPPPPDDEDASDDSATAFSPLIIA 60

Query: 62  XXXXXXXXXXXVSYYTIISEYCRNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXXXGL 121
                      VSYYTII++YCR R S  NDA E+E   N +      Q Q       GL
Sbjct: 61  IIGILASAFLLVSYYTIITKYCRRRRSR-NDATELEVNRNETP-----QDQWQLATVAGL 120

Query: 122 DEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSH 181
           DE+ IK+ITVCK+KRG+GLVE T+C+VCLSEF+E+E+LRLLPKCSHAFHLPCIDTWLKSH
Sbjct: 121 DESTIKAITVCKFKRGEGLVEDTECAVCLSEFQEDENLRLLPKCSHAFHLPCIDTWLKSH 180

Query: 182 STCPLCR 241
             CPLCR
Sbjct: 181 PNCPLCR 181

Query: 242  301
           
Sbjct: 241  181

Query: 302  361
           
Sbjct: 301  181

Query: 362  421
           
Sbjct: 361  181

Query: 422  481
           
Sbjct: 421  181

Query: 482  541
           
Sbjct: 481  181

Query: 542  560
           
Sbjct: 541  181

[Close]

BLAST of MU49370 vs. TrEMBL
Match: M5X0D2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007682mg PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.5e-51
Identity = 111/190 (58.42%), Postives = 122/190 (64.21%), Query Frame = -1


Query: 2   MGSVGNSNQWQPYA-YKDCSLEICSIYCPQWCXXXXXXXXXXXXXS---NGDSATDFSPX 61
           MGS GN N W PY  YKDCS  ICSIYCPQWC                 + DSATDFSP 
Sbjct: 1   MGSSGNQNPWAPYDNYKDCSQGICSIYCPQWCYILGPPPPPFDFAEADDSKDSATDFSPL 60

Query: 62  XXXXXXXXXXXXXXVSYYTIISEYCRNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXX 121
                         V+YYTIIS+YCR R +     ++ME+  N +QI    Q        
Sbjct: 61  IIAVIGIFASAFILVTYYTIISKYCRRRDNDGGRDIDMENS-NPNQISESWQ-----GST 120

Query: 122 XGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWL 181
            GLDE+LIKSI V KYKRGD LVEGTDCSVCLSEFEENESLRLLPKCSHAFH+PCIDTW 
Sbjct: 121 TGLDESLIKSIKVHKYKRGDSLVEGTDCSVCLSEFEENESLRLLPKCSHAFHVPCIDTWF 180

Query: 182 KSHSTCPLCR 241
           KSHS+CPLCR
Sbjct: 181 KSHSSCPLCR 184

Query: 242  301
           
Sbjct: 241  184

Query: 302  361
           
Sbjct: 301  184

Query: 362  421
           
Sbjct: 361  184

Query: 422  481
           
Sbjct: 421  184

Query: 482  541
           
Sbjct: 481  184

Query: 542  560
           
Sbjct: 541  184

[Close]

BLAST of MU49370 vs. TrEMBL
Match: V4TLB5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031956mg PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.5e-50
Identity = 110/187 (58.82%), Postives = 125/187 (66.84%), Query Frame = -1


Query: 2   SVGNS-NQWQPYA-YKDCSLEICSIYCPQWCXXXXXXXXXXXXXS-NGDSATDFSPXXXX 61
           SVGN+ N W PYA YKDCS  ICSIYCPQ C               + DS TDFSP    
Sbjct: 4   SVGNNQNPWAPYATYKDCSQAICSIYCPQGCYTIFPPPPPFNLEDEDDDSGTDFSPLIIA 63

Query: 62  XXXXXXXXXXXVSYYTIISEYCRNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXXXGL 121
                      V+YYTIIS+YC+ R+    D   +E  EN  Q+  ++Q         GL
Sbjct: 64  VIGILASAFILVTYYTIISKYCKRRS----DETGLEFSENRDQMSADDQAWQLGNNV-GL 123

Query: 122 DEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSH 181
           DEALIKSITVCKYK+GDGLVEGTDCSVCLSEF+E+ESLRLLPKC+HAFHLPCIDTWLKSH
Sbjct: 124 DEALIKSITVCKYKKGDGLVEGTDCSVCLSEFQEHESLRLLPKCNHAFHLPCIDTWLKSH 183

Query: 182 STCPLCR 241
           S+CPLCR
Sbjct: 184 SSCPLCR 185

Query: 242  301
           
Sbjct: 244  185

Query: 302  361
           
Sbjct: 304  185

Query: 362  421
           
Sbjct: 364  185

Query: 422  481
           
Sbjct: 424  185

Query: 482  541
           
Sbjct: 484  185

Query: 542  554
           
Sbjct: 544  185

[Close]

BLAST of MU49370 vs. TrEMBL
Match: A0A067DYZ2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036833mg PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.2e-49
Identity = 109/187 (58.29%), Postives = 124/187 (66.31%), Query Frame = -1


Query: 2   SVGNS-NQWQPYA-YKDCSLEICSIYCPQWCXXXXXXXXXXXXXS-NGDSATDFSPXXXX 61
           SVGN+ N W PYA YKDCS  ICSIYCPQ C               + DS TDFSP    
Sbjct: 4   SVGNNQNPWAPYATYKDCSQAICSIYCPQGCYTIFPPPPPFNLEDEDDDSGTDFSPLIIA 63

Query: 62  XXXXXXXXXXXVSYYTIISEYCRNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXXXGL 121
                      V+YYTIIS+YC+ R+    D   +E  EN  Q+   +Q         GL
Sbjct: 64  VIGILASAFILVTYYTIISKYCKRRS----DETGLEFSENRDQMSANDQAWQLGNNV-GL 123

Query: 122 DEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSH 181
           DEALIKSITVCKYK+GDGLVEG+DCSVCLSEF+E+ESLRLLPKC+HAFHLPCIDTWLKSH
Sbjct: 124 DEALIKSITVCKYKKGDGLVEGSDCSVCLSEFQEHESLRLLPKCNHAFHLPCIDTWLKSH 183

Query: 182 STCPLCR 241
           S+CPLCR
Sbjct: 184 SSCPLCR 185

Query: 242  301
           
Sbjct: 244  185

Query: 302  361
           
Sbjct: 304  185

Query: 362  421
           
Sbjct: 364  185

Query: 422  481
           
Sbjct: 424  185

Query: 482  541
           
Sbjct: 484  185

Query: 542  554
           
Sbjct: 544  185

[Close]

BLAST of MU49370 vs. TAIR10
Match: AT5G17600.1 (AT5G17600.1 RING/U-box superfamily protein)

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-46
Identity = 94/185 (50.81%), Postives = 114/185 (61.62%), Query Frame = -1


Query: 2   NSNQWQPY-AYKDCSLEICSIYCPQWCXXXXXXXXXXXXXSN--GDSATDFSPXXXXXXX 61
           N N W PY +Y DCS  IC+IYCPQWC              +    S++ FSP       
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 62  XXXXXXXXVSYYTIISEYC-RNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXXXGLDE 121
                   VSYYT+IS+YC R+  ++S++ + +    N +     +  Q       GL+E
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQTSSSETLNL----NHNGEGFFSSTQRISTNGDGLNE 123

Query: 122 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 181
           ++IKSITV KYK GDG V+G+DCSVCLSEFEENESLRLLPKC+HAFHLPCIDTWLKSHS 
Sbjct: 124 SMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSN 183

Query: 182 CPLCR 241
           CPLCR
Sbjct: 184 CPLCR 184

Query: 242  301
           
Sbjct: 244  184

Query: 302  361
           
Sbjct: 304  184

Query: 362  421
           
Sbjct: 364  184

Query: 422  481
           
Sbjct: 424  184

Query: 482  541
           
Sbjct: 484  184

Query: 542  545
           
Sbjct: 544  184

[Close]

BLAST of MU49370 vs. TAIR10
Match: AT3G03550.1 (AT3G03550.1 RING/U-box superfamily protein)

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-46
Identity = 98/201 (48.76%), Postives = 115/201 (57.21%), Query Frame = -1


Query: 2   MGSVGNSNQWQPY--AYKDCSLEICSIYCPQWCXXXXXXXXXXXXXSNGD-SATDFSPXX 61
           MGS GN N W     +Y+DCS  +CS+YCPQWC                D S++DFSP  
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 62  XXXXXXXXXXXXXVSYYTIISEYC----RNRASTSNDAMEMEDEENLSQIRHENQLQA-- 121
                        VSYYT+IS+YC     N +STS  A+     +   Q  + N      
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 122 ------XXXXXXGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 181
                       GLDE+LIKSITV KY++ DG VE +DCSVCLSEF+ENESLRLLPKC+H
Sbjct: 121 NPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 182 AFHLPCIDTWLKSHSTCPLCR 241
           AFH+PCIDTWLKSHS CPLCR
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCR 201

Query: 242  301
           
Sbjct: 241  201

Query: 302  361
           
Sbjct: 301  201

Query: 362  421
           
Sbjct: 361  201

Query: 422  481
           
Sbjct: 421  201

Query: 482  541
           
Sbjct: 481  201

Query: 542  560
           
Sbjct: 541  201

[Close]

BLAST of MU49370 vs. TAIR10
Match: AT4G17905.1 (AT4G17905.1 RING/U-box superfamily protein)

HSP 1 Score: 129.0 bits (323), Expect = 5.6e-30
Identity = 73/197 (37.06%), Postives = 98/197 (49.75%), Query Frame = -1


Query: 2   MGSVGNSNQWQPYAY-KDCSLEICSIYCPQWCXXXXXXXXXXXXXS--NGDSATD--FSP 61
           M S  N + W  Y   +DC+  +CS +CPQWC                N   A++   SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 62  XXXXXXXXXXXXXXXVSYYTIISEYCRN----RASTSNDAMEMEDEENLSQIRHENQLQA 121
                           +YYT++S+YC N     A++ +   ++  + N  +   ++   A
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 122 XXXXXXGLDEALIKSITVCKYKRGDG--LVEGTDCSVCLSEFEENESLRLLPKCSHAFHL 181
                 GLD+ LIK I   K K+      + GTDCS+CL EF E+ESLRLLPKC+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 182 PCIDTWLKSHSTCPLCR 241
            CID WLKSHS CPLCR
Sbjct: 181 VCIDRWLKSHSNCPLCR 197

Query: 242  301
           
Sbjct: 241  197

Query: 302  361
           
Sbjct: 301  197

Query: 362  421
           
Sbjct: 361  197

Query: 422  481
           
Sbjct: 421  197

Query: 482  541
           
Sbjct: 481  197

Query: 542  560
           
Sbjct: 541  197

[Close]

BLAST of MU49370 vs. TAIR10
Match: AT1G72220.1 (AT1G72220.1 RING/U-box superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 3.7e-29
Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = -1


Query: 2   NDAMEMEDEENLSQIRHENQLQAXXXXXXGLDEALIKSITVCKYKRGDGLVEGTDCSVCL 61
           ND +  E+ ++  Q+ H   L        GL +++I SIT+C YKRGDGL+E TDC VCL
Sbjct: 126 NDTVMEEEFQDREQVDHPIWL----IRTTGLQQSIINSITICNYKRGDGLIERTDCPVCL 185

Query: 62  SEFEENESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCR 121
           +EFEE+ESLRLLPKC+HAFH+ CIDTWL SH+ CPLCR
Sbjct: 186 NEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219

Query: 122  181
           
Sbjct: 246  219

Query: 182  241
           
Sbjct: 306  219

Query: 242  296
           
Sbjct: 366  219

[Close]

BLAST of MU49370 vs. TAIR10
Match: AT5G10380.1 (AT5G10380.1 RING/U-box superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 4.5e-27
Identity = 54/100 (54.00%), Postives = 66/100 (66.00%), Query Frame = -1


Query: 2   TSNDAMEMEDEENLSQIRHENQLQAXXXXXXGLDEALIKSITVCKYKRGDGLVEGTDCSV 61
           T  D  + EDE+   +    +          GL  + I SITV  +K+G+G+++GT+CSV
Sbjct: 78  TPGDTNQQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSV 137

Query: 62  CLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCR 121
           CL+EFEE+ESLRLLPKCSHAFHL CIDTWL SH  CPLCR
Sbjct: 138 CLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCR 177

Query: 122  181
           
Sbjct: 198  177

Query: 182  241
           
Sbjct: 258  177

Query: 242  301
           
Sbjct: 318  177

[Close]

BLAST of MU49370 vs. NCBI nr
Match: gi|659075731|ref|XP_008438300.1| (PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo])

HSP 1 Score: 313.2 bits (801), Expect = 6.0e-82
Identity = 151/186 (81.18%), Postives = 152/186 (81.72%), Query Frame = -1


Query: 2   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCXXXXXXXXXXXXXSNGDSATDFSPXXXXX 61
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWC             SNGDSATDFSP     
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 62  XXXXXXXXXXVSYYTIISEYCRNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXXXGLD 121
                     VSYYTIIS+YCRNRASTSNDAMEMEDEENLSQIRHENQLQA      GLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENLSQIRHENQLQAPPLPPPGLD 120

Query: 122 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 181
           EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 182 TCPLCR 241
           TCPLCR
Sbjct: 181 TCPLCR 186

Query: 242  301
           
Sbjct: 241  186

Query: 302  361
           
Sbjct: 301  186

Query: 362  421
           
Sbjct: 361  186

Query: 422  481
           
Sbjct: 421  186

Query: 482  541
           
Sbjct: 481  186

Query: 542  560
           
Sbjct: 541  186

[Close]

BLAST of MU49370 vs. NCBI nr
Match: gi|449433165|ref|XP_004134368.1| (PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 2.3e-81
Identity = 149/186 (80.11%), Postives = 152/186 (81.72%), Query Frame = -1


Query: 2   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCXXXXXXXXXXXXXSNGDSATDFSPXXXXX 61
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWC             SNGDSATDFSP     
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 62  XXXXXXXXXXVSYYTIISEYCRNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXXXGLD 121
                     VSYYTIIS+YCRNRASTSNDAMEMEDEEN+SQIRHENQLQA      GLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENISQIRHENQLQAPPLPPPGLD 120

Query: 122 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 181
           EALIKSITVCKYKRGDGLVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 182 TCPLCR 241
           TCPLCR
Sbjct: 181 TCPLCR 186

Query: 242  301
           
Sbjct: 241  186

Query: 302  361
           
Sbjct: 301  186

Query: 362  421
           
Sbjct: 361  186

Query: 422  481
           
Sbjct: 421  186

Query: 482  541
           
Sbjct: 481  186

Query: 542  560
           
Sbjct: 541  186

[Close]

BLAST of MU49370 vs. NCBI nr
Match: gi|802585195|ref|XP_012070295.1| (PREDICTED: RING-H2 finger protein ATL52-like [Jatropha curcas])

HSP 1 Score: 221.5 bits (563), Expect = 2.4e-54
Identity = 111/188 (59.04%), Postives = 125/188 (66.49%), Query Frame = -1


Query: 2   MGSVGNSNQWQPY--AYKDCSLEICSIYCPQWCXXXXXXXXXXXXXSNGDSATDFSPXXX 61
           MGSVGN N W PY  AY+DCS  ICSIYCPQWC              + DS TDFSP   
Sbjct: 1   MGSVGNQNPWSPYDTAYRDCSQGICSIYCPQWCYIIFPPPPPFTLGDD-DSGTDFSPLII 60

Query: 62  XXXXXXXXXXXXVSYYTIISEYCRNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXXXG 121
                       VSYYTIIS+YCR R S   + ME++   N  QI  E    A      G
Sbjct: 61  AVIGILASAFILVSYYTIISKYCRRRGSHPENTMELDG--NRDQISSE----AWQSINGG 120

Query: 122 LDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKS 181
           LDE++IKSITVCKYK+GDG V+G+DCSVCLSEF+ENE LRLLPKCSHAFHLPCIDTWLKS
Sbjct: 121 LDESIIKSITVCKYKKGDGFVDGSDCSVCLSEFQENEDLRLLPKCSHAFHLPCIDTWLKS 180

Query: 182 HSTCPLCR 241
           H++CPLCR
Sbjct: 181 HASCPLCR 181

Query: 242  301
           
Sbjct: 241  181

Query: 302  361
           
Sbjct: 301  181

Query: 362  421
           
Sbjct: 361  181

Query: 422  481
           
Sbjct: 421  181

Query: 482  541
           
Sbjct: 481  181

Query: 542  560
           
Sbjct: 541  181

[Close]

BLAST of MU49370 vs. NCBI nr
Match: gi|460367311|ref|XP_004229518.1| (PREDICTED: RING-H2 finger protein ATL51 [Solanum lycopersicum])

HSP 1 Score: 213.0 bits (541), Expect = 8.4e-52
Identity = 106/187 (56.68%), Postives = 125/187 (66.84%), Query Frame = -1


Query: 2   MGSVGNSNQWQPY-AYKDCSLEICSIYCPQWCXXXXXXXXXXXXXSNGDSATDFSPXXXX 61
           MGS+GN+N W PY +YKDCS  ICS+YCPQWC             ++ DSAT FSP    
Sbjct: 1   MGSIGNTNPWAPYDSYKDCSQGICSVYCPQWCYFLLPPPPPDDEDASDDSATAFSPLIIA 60

Query: 62  XXXXXXXXXXXVSYYTIISEYCRNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXXXGL 121
                      VSYYTII++YCR R S  NDA E+E   N +      Q Q       GL
Sbjct: 61  IIGILASAFLLVSYYTIITKYCRRRRSR-NDATELEVNRNETP-----QDQWQLATVAGL 120

Query: 122 DEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSH 181
           DE+ IK+ITVCK+KRG+GLVE T+C+VCLSEF+E+E+LRLLPKCSHAFHLPCIDTWLKSH
Sbjct: 121 DESTIKAITVCKFKRGEGLVEDTECAVCLSEFQEDENLRLLPKCSHAFHLPCIDTWLKSH 180

Query: 182 STCPLCR 241
             CPLCR
Sbjct: 181 PNCPLCR 181

Query: 242  301
           
Sbjct: 241  181

Query: 302  361
           
Sbjct: 301  181

Query: 362  421
           
Sbjct: 361  181

Query: 422  481
           
Sbjct: 421  181

Query: 482  541
           
Sbjct: 481  181

Query: 542  560
           
Sbjct: 541  181

[Close]

BLAST of MU49370 vs. NCBI nr
Match: gi|645252431|ref|XP_008232120.1| (PREDICTED: RING-H2 finger protein ATL52-like [Prunus mume])

HSP 1 Score: 210.7 bits (535), Expect = 4.2e-51
Identity = 112/190 (58.95%), Postives = 123/190 (64.74%), Query Frame = -1


Query: 2   MGSVGNSNQWQPYA-YKDCSLEICSIYCPQWCXXXXXXXXXXXXXS---NGDSATDFSPX 61
           MGS GN N W PY  YKDCS  ICSIYCPQWC                 + DSATDFSP 
Sbjct: 1   MGSSGNQNPWAPYDNYKDCSQGICSIYCPQWCYILGPPPPPFDFAEADDSKDSATDFSPL 60

Query: 62  XXXXXXXXXXXXXXVSYYTIISEYCRNRASTSNDAMEMEDEENLSQIRHENQLQAXXXXX 121
                         V+YYTIIS+YCR R +     ++ME+  N +QI    Q        
Sbjct: 61  IIAVIGIFASAFILVTYYTIISKYCRRRDNDGGRDIDMENS-NPNQISESWQ-----GST 120

Query: 122 XGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWL 181
            GLDE+LIKSI V KYKRGD LVEGTDCSVCLSEFEENESLRLLPKCSHAFH+PCIDTWL
Sbjct: 121 TGLDESLIKSIKVHKYKRGDSLVEGTDCSVCLSEFEENESLRLLPKCSHAFHVPCIDTWL 180

Query: 182 KSHSTCPLCR 241
           KSHS+CPLCR
Sbjct: 181 KSHSSCPLCR 184

Query: 242  301
           
Sbjct: 241  184

Query: 302  361
           
Sbjct: 301  184

Query: 362  421
           
Sbjct: 361  184

Query: 422  481
           
Sbjct: 421  184

Query: 482  541
           
Sbjct: 481  184

Query: 542  560
           
Sbjct: 541  184

The following BLAST results are available for this feature:

BLAST of MU49370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL52_ARATH	2.0e-45	50.81	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1	[more]
ATL51_ARATH	3.4e-45	48.76	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2	[more]
ATL41_ORYSJ	2.9e-36	46.39	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04...	[more]
ATL53_ARATH	1.0e-28	37.06	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana GN=ATL53 PE=3 SV=2	[more]
ATL54_ARATH	6.5e-28	58.16	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2	[more]

BLAST of MU49370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L405_CUCSA	1.6e-81	80.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129520 PE=4 SV=1	[more]
K4AXZ6_SOLLC	7.7e-52	56.68	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
M5X0D2_PRUPE	8.5e-51	58.42	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007682mg PE=4 SV=1	[more]
V4TLB5_9ROSI	2.5e-50	58.82	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031956mg PE=4 SV=1	[more]
A0A067DYZ2_CITSI	1.2e-49	58.29	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036833mg PE=4 SV=1	[more]

BLAST of MU49370 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17600.1	1.1e-46	50.81	RING/U-box superfamily protein	[more]
AT3G03550.1	1.9e-46	48.76	RING/U-box superfamily protein	[more]
AT4G17905.1	5.6e-30	37.06	RING/U-box superfamily protein	[more]
AT1G72220.1	3.7e-29	58.16	RING/U-box superfamily protein	[more]
AT5G10380.1	4.5e-27	54.00	RING/U-box superfamily protein	[more]

BLAST of MU49370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075731\|ref\|XP_008438300.1\|	6.0e-82	81.18	PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo]	[more]
gi\|449433165\|ref\|XP_004134368.1\|	2.3e-81	80.11	PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]	[more]
gi\|802585195\|ref\|XP_012070295.1\|	2.4e-54	59.04	PREDICTED: RING-H2 finger protein ATL52-like [Jatropha curcas]	[more]
gi\|460367311\|ref\|XP_004229518.1\|	8.4e-52	56.68	PREDICTED: RING-H2 finger protein ATL51 [Solanum lycopersicum]	[more]
gi\|645252431\|ref\|XP_008232120.1\|	4.2e-51	58.95	PREDICTED: RING-H2 finger protein ATL52-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006278	MELO3C006278	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
15D17C07	15D17C07	EST
15D31B03	15D31B03	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 143..186 score: 1.1
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 144..185 score: 2.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 144..186 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 140..186 score: 2.8
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 1..186 score: 5.7E
None	No IPR available	PANTHER	PTHR14155:SF159	SUBFAMILY NOT NAMED	coord: 1..186 score: 5.7E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 131..186 score: 2.37