MU48833 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU48833
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Chitinase
Location	chr8 : 6508213 .. 6508879 (+)
Sequence length	666

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AATCCAGATTTGGTAGCCACTGATCCAGTGATAGCATTCAAGACGGCCATTTGGTTTTGGATGACACCACAAGGAAACAAACCATCATCTCATGATGTTATTACTGGTCGGTGGCGGCCATCAGACTCCGATAGAGATTCGGGAAGATACCCCGGTTACGGTGTCATTACCAACATCATTAATGGCGGAGTCGAATGTGGAAGTGGTTATAATGATGCAGTCAATGGTAGAATTGAATTTTACAAAAGGTATTGTGACATGTTAGGTGTTAGCTATGGAGACAACTTTGACTGCTACTATCAAAGTTCTTTTGCTTAAACCTTCATAACAAAGTATAAGCAGAAATATATGTGAGAAAAACCTCAACGTCGAAGTATATGAGCAGAAATGTATGTAATGTAATGTCAGTAACTTTGGAATAAATAGTTTTTCTCACCTTAATAAAGGCAAGCCTGTTCATATGTGTGTGTGTGTTTGATTCTATATTTGAACAAGAACTATTATCACAAAGTAACTCTCAATAGTTTAGTCTAAAGAATCATAATTGGTTCGTACTGTACAATAGATAATTAAGAATCTCTTTTCTCCAAATTAGTTCAAGAAAGGCTCCCCATAGCCTTAGCCCTTTCCCTTAATATGAACTTTTGAACCTTTCCTGTTGACGTC

Library


Library category	ESTs
melon A library	1
melon AI library	1

Homology

[Close]

BLAST of MU48833 vs. Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.2e-41
Identity = 76/105 (72.38%), Postives = 82/105 (78.10%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLV+TD V++FKTAIWFWMT QGNKPS HDVI GRW PS +D  +GR PGYGVITNII
Sbjct: 156 NPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNII 215

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSFA 120
           NGG+ECG G NDA   RI +YKRYCDMLG  YG N DCY Q +FA
Sbjct: 216 NGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNFA 260

Query: 121  180
           
Sbjct: 276  260

Query: 181  240
           
Sbjct: 336  260

Query: 241  300
           
Sbjct: 396  260

Query: 301  316
           
Sbjct: 456  260

[Close]

BLAST of MU48833 vs. Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 7.2e-41
Identity = 73/104 (70.19%), Postives = 80/104 (76.92%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLVATDPVI+FKTA+WFWMTPQ  KPS HDVITG W PS +DR +GR PGYG +TNII
Sbjct: 204 NPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNII 263

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSF 120
           NGG+ECG G +  V  RI FYKRYCD+ G+ YGDN DCY Q  F
Sbjct: 264 NGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPF 307

Query: 121  180
           
Sbjct: 324  307

Query: 181  240
           
Sbjct: 384  307

Query: 241  300
           
Sbjct: 444  307

Query: 301  313
           
Sbjct: 504  307

[Close]

BLAST of MU48833 vs. Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.6e-40
Identity = 73/104 (70.19%), Postives = 82/104 (78.85%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDL+++DP I+FK+A WFWMTPQ  KPS H+VI G W PS SDR +GR PGYGVITNII
Sbjct: 212 NPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNII 271

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSF 120
           NGG+ECG G+N  V  RI FYKRYCD+LGVSYG+N DCY QS F
Sbjct: 272 NGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPF 315

Query: 121  180
           
Sbjct: 332  315

Query: 181  240
           
Sbjct: 392  315

Query: 241  300
           
Sbjct: 452  315

Query: 301  313
           
Sbjct: 512  315

[Close]

BLAST of MU48833 vs. Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.6e-40
Identity = 74/105 (70.48%), Postives = 82/105 (78.10%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLVATDP ++FKTA+WFWMT Q  KPSSH VITG+W PS +DR +GR PG+GVITNII
Sbjct: 162 NPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNII 221

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSFA 120
           NGG+ECG G +  V  RI FYKRYCD+LGV YGDN DCY Q  FA
Sbjct: 222 NGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPFA 266

Query: 121  180
           
Sbjct: 282  266

Query: 181  240
           
Sbjct: 342  266

Query: 241  300
           
Sbjct: 402  266

Query: 301  316
           
Sbjct: 462  266

[Close]

BLAST of MU48833 vs. Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.9e-40
Identity = 74/104 (71.15%), Postives = 82/104 (78.85%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLVATD  I+FKTAIWFWMTPQ NKPSSHDVI GRW PS +D+ + R PGYGVITNII
Sbjct: 147 NPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNII 206

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSF 120
           NGG+ECG G NDAV  RI +Y+RYC ML V+ G+N DCY Q +F
Sbjct: 207 NGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNF 250

Query: 121  180
           
Sbjct: 267  250

Query: 181  240
           
Sbjct: 327  250

Query: 241  300
           
Sbjct: 387  250

Query: 301  313
           
Sbjct: 447  250

[Close]

BLAST of MU48833 vs. TrEMBL
Match: A0A0A0KJL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509040 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.6e-53
Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLVATD  +AFKTAIWFWMTPQGNKPSSHDVITGRW+PSDSDRDSGRYPGYGVITNII
Sbjct: 220 NPDLVATDAEVAFKTAIWFWMTPQGNKPSSHDVITGRWQPSDSDRDSGRYPGYGVITNII 279

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSFA 120
           NGGVECG GYNDAVNGRIEFYKRYCDMLGVSYGDN DCY+Q SFA
Sbjct: 280 NGGVECGGGYNDAVNGRIEFYKRYCDMLGVSYGDNLDCYHQRSFA 324

Query: 121  180
           
Sbjct: 340  324

Query: 181  240
           
Sbjct: 400  324

Query: 241  300
           
Sbjct: 460  324

Query: 301  316
           
Sbjct: 520  324

[Close]

BLAST of MU48833 vs. TrEMBL
Match: B5TYQ3_9ROSI (Class I chitinase OS=Dimocarpus longan GN=ChiI PE=2 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 3.5e-42
Identity = 81/105 (77.14%), Postives = 88/105 (83.81%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDL ATDPVI+FKTAIWFWMTPQGNKPSSH+VI G W PSD+DR + R PGYGVITNII
Sbjct: 218 NPDLAATDPVISFKTAIWFWMTPQGNKPSSHNVIIGSWTPSDADRSANRVPGYGVITNII 277

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSFA 120
           NGG ECGSG ND V  RI FY+RYCD+LGVSYG+N DCY Q  FA
Sbjct: 278 NGGRECGSGANDKVASRIGFYRRYCDVLGVSYGNNLDCYNQRPFA 322

Query: 121  180
           
Sbjct: 338  322

Query: 181  240
           
Sbjct: 398  322

Query: 241  300
           
Sbjct: 458  322

Query: 301  316
           
Sbjct: 518  322

[Close]

BLAST of MU48833 vs. TrEMBL
Match: Q9FPM1_FRAAN (Chitinase OS=Fragaria ananassa GN=Chi2-2 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.7e-42
Identity = 81/104 (77.88%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLVATDPVI+FKTAIWFWMTPQGNKPSSHDVITGRW PS +DR +GR PGYGVITNII
Sbjct: 157 NPDLVATDPVISFKTAIWFWMTPQGNKPSSHDVITGRWNPSAADRSAGRVPGYGVITNII 216

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSF 120
           NGG+ECG G ++ V  RI FYKRYC MLGV  GDN DCY Q  F
Sbjct: 217 NGGLECGRGQDNRVADRIGFYKRYCGMLGVGTGDNLDCYNQRPF 260

Query: 121  180
           
Sbjct: 277  260

Query: 181  240
           
Sbjct: 337  260

Query: 241  300
           
Sbjct: 397  260

Query: 301  313
           
Sbjct: 457  260

[Close]

BLAST of MU48833 vs. TrEMBL
Match: Q944U5_FRAAN (Class II chitinase OS=Fragaria ananassa GN=chi2-2 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.7e-42
Identity = 81/104 (77.88%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLVATDPVI+FKTAIWFWMTPQGNKPSSHDVITGRW PS +DR +GR PGYGVITNII
Sbjct: 157 NPDLVATDPVISFKTAIWFWMTPQGNKPSSHDVITGRWNPSAADRSAGRVPGYGVITNII 216

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSF 120
           NGG+ECG G ++ V  RI FYKRYC MLGV  GDN DCY Q  F
Sbjct: 217 NGGLECGRGQDNRVADRIGFYKRYCGMLGVGTGDNLDCYNQRPF 260

Query: 121  180
           
Sbjct: 277  260

Query: 181  240
           
Sbjct: 337  260

Query: 241  300
           
Sbjct: 397  260

Query: 301  313
           
Sbjct: 457  260

[Close]

BLAST of MU48833 vs. TrEMBL
Match: P93680_PERAE (Endochitinase OS=Persea americana GN=chi1 PE=2 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 1.0e-41
Identity = 79/104 (75.96%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPD VATDPVI+FKTA+WFWMTPQ  KPS H+VITGRW PS +DR +GR PGYGVITNII
Sbjct: 212 NPDAVATDPVISFKTALWFWMTPQSPKPSCHNVITGRWTPSAADRAAGRLPGYGVITNII 271

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSF 120
           NGG+ECG G+ND V  RI FYKRYCD+LGVSYG N DCY Q SF
Sbjct: 272 NGGIECGKGFNDKVADRIGFYKRYCDLLGVSYGSNLDCYNQRSF 315

Query: 121  180
           
Sbjct: 332  315

Query: 181  240
           
Sbjct: 392  315

Query: 241  300
           
Sbjct: 452  315

Query: 301  313
           
Sbjct: 512  315

[Close]

BLAST of MU48833 vs. TAIR10
Match: AT3G12500.1 (AT3G12500.1 basic chitinase)

HSP 1 Score: 152.5 bits (384), Expect = 3.0e-37
Identity = 70/104 (67.31%), Postives = 78/104 (75.00%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLVA D VIAFK AIWFWMT Q  KPS H VI G+W+PSD+DR +GR PGYGVITNII
Sbjct: 223 NPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNII 282

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSF 120
           NGG+ECG G +  V  RI FY+RYC++ GV+ G N DCY Q SF
Sbjct: 283 NGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSF 326

Query: 121  180
           
Sbjct: 343  326

Query: 181  240
           
Sbjct: 403  326

Query: 241  300
           
Sbjct: 463  326

Query: 301  313
           
Sbjct: 523  326

[Close]

BLAST of MU48833 vs. TAIR10
Match: AT4G01700.1 (AT4G01700.1 Chitinase family protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26
Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NP+LVA + V+AFKTA+WFWMT Q  KPS H+V+  R+RP+ +DR + R  GYG++TNII
Sbjct: 176 NPELVANNSVLAFKTALWFWMTEQTPKPSCHNVMVNRYRPTKADRAANRTVGYGLVTNII 235

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSFA 120
           NGG+ECG   +  V  R+ +++RY  +  V+ G N DC  Q  F+
Sbjct: 236 NGGLECGIPGDGRVTDRVGYFQRYAQLFKVTTGPNLDCENQRPFS 280

Query: 121  180
           
Sbjct: 296  280

Query: 181  240
           
Sbjct: 356  280

Query: 241  300
           
Sbjct: 416  280

Query: 301  316
           
Sbjct: 476  280

[Close]

BLAST of MU48833 vs. TAIR10
Match: AT1G02360.1 (AT1G02360.1 Chitinase family protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-26
Identity = 53/105 (50.48%), Postives = 71/105 (67.62%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NP+ V+ + VIAF+TA+WFWMTPQ  KPS HDV+ G++RP+ +D  + R  G+G+ TNII
Sbjct: 168 NPETVSNNSVIAFQTALWFWMTPQSPKPSCHDVMIGKYRPTAADLAANRTGGFGLTTNII 227

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSFA 120
           NGG+ECG   +  VN RI F++RY  +  V+ G N DC  Q  +A
Sbjct: 228 NGGLECGIPGDGRVNDRIGFFQRYTGLFKVATGPNLDCENQRPYA 272

Query: 121  180
           
Sbjct: 288  272

Query: 181  240
           
Sbjct: 348  272

Query: 241  300
           
Sbjct: 408  272

Query: 301  316
           
Sbjct: 468  272

[Close]

BLAST of MU48833 vs. TAIR10
Match: AT3G16920.1 (AT3G16920.1 chitinase-like protein 2)

HSP 1 Score: 82.0 bits (201), Expect = 5.0e-16
Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTP-QGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNI 60
           +P+ +  +  +AF+ AIW WMTP + + PS+HDV  G+W+P+ +D  + R PG+G   N+
Sbjct: 224 HPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKRTPGFGATINV 283

Query: 61  INGGVECGSGY-NDAVNGRIEFYKRYCDMLGV 120
           + G   C SG+ ND +N  +  Y  Y D++GV
Sbjct: 284 LYGDQICNSGFDNDEMNNIVSHYLYYLDLIGV 315

Query: 121  180
           
Sbjct: 344  315

Query: 181  240
           
Sbjct: 404  315

Query: 241  271
           
Sbjct: 464  315

[Close]

BLAST of MU48833 vs. TAIR10
Match: AT1G05850.1 (AT1G05850.1 Chitinase family protein)

HSP 1 Score: 77.8 bits (190), Expect = 9.4e-15
Identity = 37/110 (33.64%), Postives = 56/110 (50.91%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTP-QGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNI 60
           +P+ +  +  +AF+ AIW WMTP +  +PS+HD+  G W+P+ +D  S R P +G   N+
Sbjct: 201 HPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNV 260

Query: 61  INGGVECGSGYNDAVNGRIEFYKRYCDMLGVSY-----GDNFDCYYQSSF 120
           + G   CG G  D +N  I  Y  + D++G+        D   C  Q  F
Sbjct: 261 LYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPNDELSCAEQKPF 310

Query: 121  180
           
Sbjct: 321  310

Query: 181  240
           
Sbjct: 381  310

Query: 241  300
           
Sbjct: 441  310

Query: 301  313
           
Sbjct: 501  310

[Close]

BLAST of MU48833 vs. NCBI nr
Match: gi|659080644|ref|XP_008440903.1| (PREDICTED: endochitinase-like [Cucumis melo])

HSP 1 Score: 229.6 bits (584), Expect = 5.5e-57
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRW+PSDSDRDSGRYPGYGVITNII
Sbjct: 221 NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWQPSDSDRDSGRYPGYGVITNII 280

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSFA 120
           NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDN DCYYQSSFA
Sbjct: 281 NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNLDCYYQSSFA 325

Query: 121  180
           
Sbjct: 341  325

Query: 181  240
           
Sbjct: 401  325

Query: 241  300
           
Sbjct: 461  325

Query: 301  316
           
Sbjct: 521  325

[Close]

BLAST of MU48833 vs. NCBI nr
Match: gi|700193780|gb|KGN48984.1| (hypothetical protein Csa_6G509040 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 1.3e-53
Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLVATD  +AFKTAIWFWMTPQGNKPSSHDVITGRW+PSDSDRDSGRYPGYGVITNII
Sbjct: 220 NPDLVATDAEVAFKTAIWFWMTPQGNKPSSHDVITGRWQPSDSDRDSGRYPGYGVITNII 279

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSFA 120
           NGGVECG GYNDAVNGRIEFYKRYCDMLGVSYGDN DCY+Q SFA
Sbjct: 280 NGGVECGGGYNDAVNGRIEFYKRYCDMLGVSYGDNLDCYHQRSFA 324

Query: 121  180
           
Sbjct: 340  324

Query: 181  240
           
Sbjct: 400  324

Query: 241  300
           
Sbjct: 460  324

Query: 301  316
           
Sbjct: 520  324

[Close]

BLAST of MU48833 vs. NCBI nr
Match: gi|778719880|ref|XP_004135003.2| (PREDICTED: endochitinase A-like [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 1.3e-53
Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLVATD  +AFKTAIWFWMTPQGNKPSSHDVITGRW+PSDSDRDSGRYPGYGVITNII
Sbjct: 215 NPDLVATDAEVAFKTAIWFWMTPQGNKPSSHDVITGRWQPSDSDRDSGRYPGYGVITNII 274

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSFA 120
           NGGVECG GYNDAVNGRIEFYKRYCDMLGVSYGDN DCY+Q SFA
Sbjct: 275 NGGVECGGGYNDAVNGRIEFYKRYCDMLGVSYGDNLDCYHQRSFA 319

Query: 121  180
           
Sbjct: 335  319

Query: 181  240
           
Sbjct: 395  319

Query: 241  300
           
Sbjct: 455  319

Query: 301  316
           
Sbjct: 515  319

[Close]

BLAST of MU48833 vs. NCBI nr
Match: gi|289719778|gb|ACH92946.2| (class I chitinase [Dimocarpus longan])

HSP 1 Score: 181.4 bits (459), Expect = 1.7e-42
Identity = 81/105 (77.14%), Postives = 88/105 (83.81%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDL ATDPVI+FKTAIWFWMTPQGNKPSSH+VI G W PSD+DR + R PGYGVITNII
Sbjct: 218 NPDLAATDPVISFKTAIWFWMTPQGNKPSSHNVIIGSWTPSDADRSANRVPGYGVITNII 277

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSFA 120
           NGG ECGSG ND V  RI FY+RYCD+LGVSYG+N DCY Q  FA
Sbjct: 278 NGGRECGSGANDKVASRIGFYRRYCDVLGVSYGNNLDCYNQRPFA 322

Query: 121  180
           
Sbjct: 338  322

Query: 181  240
           
Sbjct: 398  322

Query: 241  300
           
Sbjct: 458  322

Query: 301  316
           
Sbjct: 518  322

[Close]

BLAST of MU48833 vs. NCBI nr
Match: gi|11528439|gb|AAG37276.1|AF320111_1 (chitinase [Fragaria x ananassa])

HSP 1 Score: 179.9 bits (455), Expect = 5.0e-42
Identity = 81/104 (77.88%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 1   NPDLVATDPVIAFKTAIWFWMTPQGNKPSSHDVITGRWRPSDSDRDSGRYPGYGVITNII 60
           NPDLVATDPVI+FKTAIWFWMTPQGNKPSSHDVITGRW PS +DR +GR PGYGVITNII
Sbjct: 157 NPDLVATDPVISFKTAIWFWMTPQGNKPSSHDVITGRWNPSAADRSAGRVPGYGVITNII 216

Query: 61  NGGVECGSGYNDAVNGRIEFYKRYCDMLGVSYGDNFDCYYQSSF 120
           NGG+ECG G ++ V  RI FYKRYC MLGV  GDN DCY Q  F
Sbjct: 217 NGGLECGRGQDNRVADRIGFYKRYCGMLGVGTGDNLDCYNQRPF 260

Query: 121  180
           
Sbjct: 277  260

Query: 181  240
           
Sbjct: 337  260

Query: 241  300
           
Sbjct: 397  260

Query: 301  313
           
Sbjct: 457  260

The following BLAST results are available for this feature:

BLAST of MU48833 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CHI8_ORYSJ	3.2e-41	72.38	Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1	[more]
CHI2_PEA	7.2e-41	70.19	Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2	[more]
CHI1_GOSHI	3.6e-40	70.19	Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1	[more]
CHIC_SECCE	3.6e-40	70.48	Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1	[more]
CHIQ_TOBAC	7.9e-40	71.15	Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1	[more]

BLAST of MU48833 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJL2_CUCSA	2.6e-53	92.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509040 PE=3 SV=1	[more]
B5TYQ3_9ROSI	3.5e-42	77.14	Class I chitinase OS=Dimocarpus longan GN=ChiI PE=2 SV=2	[more]
Q9FPM1_FRAAN	7.7e-42	77.88	Chitinase OS=Fragaria ananassa GN=Chi2-2 PE=3 SV=1	[more]
Q944U5_FRAAN	7.7e-42	77.88	Class II chitinase OS=Fragaria ananassa GN=chi2-2 PE=2 SV=1	[more]
P93680_PERAE	1.0e-41	75.96	Endochitinase OS=Persea americana GN=chi1 PE=2 SV=2	[more]

BLAST of MU48833 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12500.1	3.0e-37	67.31	basic chitinase	[more]
AT4G01700.1	1.1e-26	49.52	Chitinase family protein	[more]
AT1G02360.1	1.4e-26	50.48	Chitinase family protein	[more]
AT3G16920.1	5.0e-16	39.13	chitinase-like protein 2	[more]
AT1G05850.1	9.4e-15	33.64	Chitinase family protein	[more]

BLAST of MU48833 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080644\|ref\|XP_008440903.1\|	5.5e-57	98.10	PREDICTED: endochitinase-like [Cucumis melo]	[more]
gi\|700193780\|gb\|KGN48984.1\|	1.3e-53	92.38	hypothetical protein Csa_6G509040 [Cucumis sativus]	[more]
gi\|778719880\|ref\|XP_004135003.2\|	1.3e-53	92.38	PREDICTED: endochitinase A-like [Cucumis sativus]	[more]
gi\|289719778\|gb\|ACH92946.2\|	1.7e-42	77.14	class I chitinase [Dimocarpus longan]	[more]
gi\|11528439\|gb\|AAG37276.1\|AF320111_1	5.0e-42	77.88	chitinase [Fragaria x ananassa]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000726	Glyco_hydro_19_cat
IPR023346	Lysozyme-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0004568	chitinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006032	chitin catabolic process
GO:0016998	cell wall macromolecule catabolic process

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0006032	chitin catabolic process
molecular_function	GO:0004568	chitinase activity

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C007966	MELO3C007966	gene
MELO3C007967	MELO3C007967	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
A30B12	A30B12	EST
AI19H02	AI19H02	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000726	Glycoside hydrolase, family 19, catalytic	PFAM	PF00182	Glyco_hydro_19	coord: 1..98 score: 2.7
IPR000726	Glycoside hydrolase, family 19, catalytic	PROSITE	PS00774	CHITINASE_19_2	coord: 11..21 scor
IPR023346	Lysozyme-like domain	unknown	SSF53955	Lysozyme-like	coord: 1..104 score: 6.47
None	No IPR available	GENE3D	G3DSA:1.10.530.10		coord: 8..104 score: 1.3
None	No IPR available	PANTHER	PTHR22595	CHITINASE-RELATED	coord: 1..104 score: 1.7
None	No IPR available	PANTHER	PTHR22595:SF34	BASIC ENDOCHITINASE B	coord: 1..104 score: 1.7