MU48683 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU48683
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	30S ribosomal protein S5, putative
Location	chr11 : 7536238 .. 7546852 (+)
Sequence length	1092

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CCGCAGCCGCACGCCCCATCGGCAGCTTCCTTCTCTCCTATCAGTATCTCCATTGCTTCCCAACGCCACCACACTCATCAACCTTCCATCCCCCTGCTTCCCATCTCTCTTCCTCAGCTGCTTCCGCCGCCGGCCGCCGGCACTCCACCACACCCACAACTTAATGTCGTTTTCTAGGAAAAGTTCATGCTTCAGCAGAAATTAAATAGGGCTATGCGAATTGTGGAGTGGAAGGAAGCTTATGACCCAAATGATCCTGCCAACTATGGAGCCATTCAACGCAGACAATGAGGTCCATCAGTTAATCTTGAGGAACAATCAGAATTTGCAAAACAGAAGCGAACCATACAGGGGATTGATGATGATGATGAGGAAGAGTTTGATGACGTGAAAGAAAGGGATGATATACTACTGGAGAAGCTCAATGCTATAGATAAGAAACTCGAAGAGAAGCTAGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAGGAAATCCGAGATCTTGCGAGGAGAGAAACTCGTTAACTGAGAAGAAGAGAAGGCCACTTTATCGAAAAGGCTTTGATGTGAAATTAATTGATGTGAACAGAACTTGTAAAGTTACAAAGGGAGGAAAAGTTGTCAAATACACTGCTATCTTGGCTTGTGGGAACTACCATGGCATTGTTGGTTATGCAACAGCCAAAGGACCGGCAGTCCCGATTGCTTTACAAAAGGCGTATGAGAAATGTTTCCAAAATCTTCATTACGTGGAACGGCATGAGGAGCACACAATTGCACATGCAGTACAGACGGCATACAAGAAAACAAAGGTATATCTTTGGCCAGCATCAACTACCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTTTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTTGTTGGCTCAAGAAACCCCCTGAACACTATGAGGGCCCTCTTCAAAGCTCTAAATGCAATTGAGACTCCGAAGGATATTCAAGAAAAGTTCGGACGGACCGTTGTTGAGAAGTACTTGCTATGATAGGAGGTTTTCTTTTTCCTCTTTCCTTTTTGTTTCTAAT

Library


Library category	ESTs
melon 15d library	1
melon PSI library	1

Homology

[Close]

BLAST of MU48683 vs. Swiss-Prot
Match: RS5_PSEE4 (30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) GN=rpsE PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-21
Identity = 59/156 (37.82%), Postives = 89/156 (57.05%), Query Frame = 3


Query: 570  KGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCF 629
            +G+  KL+ VNR            +TA+   G+  G VG+   K   VP A+QKA E   
Sbjct: 10   EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 630  QNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV 689
            +N+  V+  +  T+ +A + A+  +KVY+ PAS  TG+ AG  ++ VL +AG +NV +K 
Sbjct: 70   RNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 690  VGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVE 749
             GS NP+N + A FK L A+++P+ I  K G+TV E
Sbjct: 130  YGSTNPVNVVHATFKGLKAMQSPESIAAKRGKTVEE 164

Query: 750   809
            
Sbjct: 190   164

Query: 810   869
            
Sbjct: 250   164

Query: 870   929
            
Sbjct: 310   164

Query: 930   989
            
Sbjct: 370   164

Query: 990   1038
            
Sbjct: 430   164

[Close]

BLAST of MU48683 vs. Swiss-Prot
Match: RS5_PSEF5 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rpsE PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-21
Identity = 58/156 (37.18%), Postives = 91/156 (58.33%), Query Frame = 3


Query: 570  KGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCF 629
            +G+  KL+ VNR            +TA+   G+  G VG+   K   VP A+QKA E   
Sbjct: 10   EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 630  QNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV 689
            +N+  V+ +   T+ +A+++A+  +KVY+ PAS  TG+ AG  ++ VL +AG +NV +K 
Sbjct: 70   RNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 690  VGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVE 749
             GS NP+N + A FK L A+++P+ I  K G++V E
Sbjct: 130  YGSTNPVNVVHATFKGLKAMQSPESIAAKRGKSVQE 164

Query: 750   809
            
Sbjct: 190   164

Query: 810   869
            
Sbjct: 250   164

Query: 870   929
            
Sbjct: 310   164

Query: 930   989
            
Sbjct: 370   164

Query: 990   1038
            
Sbjct: 430   164

[Close]

BLAST of MU48683 vs. Swiss-Prot
Match: RS5_PSEFS (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) GN=rpsE PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-21
Identity = 59/156 (37.82%), Postives = 90/156 (57.69%), Query Frame = 3


Query: 570  KGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCF 629
            +G+  KL+ VNR            +TA+   G+  G VG+   K   VP A+QKA E   
Sbjct: 10   EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 630  QNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV 689
            +N+  V+ +   T+ +A+++A+  +KVY+ PAS  TG+ AG  ++ VL +AG +NV +K 
Sbjct: 70   RNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 690  VGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVE 749
             GS NP+N + A FK L A+++P+ I  K G TV E
Sbjct: 130  YGSTNPVNVVHATFKGLKAMQSPESIAAKRGLTVKE 164

Query: 750   809
            
Sbjct: 190   164

Query: 810   869
            
Sbjct: 250   164

Query: 870   929
            
Sbjct: 310   164

Query: 930   989
            
Sbjct: 370   164

Query: 990   1038
            
Sbjct: 430   164

[Close]

BLAST of MU48683 vs. Swiss-Prot
Match: RS5_BLOPB (30S ribosomal protein S5 OS=Blochmannia pennsylvanicus (strain BPEN) GN=rpsE PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.6e-21
Identity = 55/151 (36.42%), Postives = 88/151 (58.28%), Query Frame = 3


Query: 585  KLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 644
            KLI VNR            +TA+   G+ +G VG+   K   VP A+QK+ EK  +N+  
Sbjct: 14   KLITVNRVSKTVKGGRVFSFTALTVVGDANGRVGFGYGKAREVPSAIQKSMEKARRNMVI 73

Query: 645  VERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRN 704
            +  ++  T+ HAV+  Y  +++Y+ PAS  TG+ AG T++ +L + G  NV +K  GS N
Sbjct: 74   ISLYKG-TLQHAVKGVYTGSRIYMQPASEGTGIIAGTTMRAILEVVGIHNVLAKAYGSTN 133

Query: 705  PLNTMRALFKALNAIETPKDIQEKFGRTVVE 764
            P+N +RA   AL ++++P+ I EK G+++ E
Sbjct: 134  PINIVRATINALQSMKSPEMIAEKRGKSISE 163

Query: 765   824
            
Sbjct: 194   163

Query: 825   884
            
Sbjct: 254   163

Query: 885   944
            
Sbjct: 314   163

Query: 945   1004
            
Sbjct: 374   163

Query: 1005  1038
            
Sbjct: 434   163

[Close]

BLAST of MU48683 vs. Swiss-Prot
Match: RS5_XANOP (30S ribosomal protein S5 OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=rpsE PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.6e-21
Identity = 59/165 (35.76%), Postives = 89/165 (53.94%), Query Frame = 3


Query: 543  EKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAKGPAVPIA 602
            ++ R      G   KL+ VNR            +TA+   G+  G VG+   K   VP+A
Sbjct: 13   DRNREEKVDDGMIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGLGKVGFGYGKAREVPVA 72

Query: 603  LQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLA 662
            +QK+ E+  +NL  V+ +   T+ HAV++ +   +VY+ PAS  TG+ AG  ++ VL   
Sbjct: 73   IQKSMEQARKNLATVDLNNG-TLWHAVKSGHGAARVYMQPASEGTGVIAGGAMRAVLEAV 132

Query: 663  GFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVE 722
            G KNV +K VGSRNP+N +RA  K L+ +++P  +  K G+ V E
Sbjct: 133  GVKNVLAKAVGSRNPINLVRATLKGLSEVQSPARVAAKRGKKVEE 176

Query: 723   782
            
Sbjct: 193   176

Query: 783   842
            
Sbjct: 253   176

Query: 843   902
            
Sbjct: 313   176

Query: 903   962
            
Sbjct: 373   176

Query: 963   1022
            
Sbjct: 433   176

Query: 1023  1038
            
Sbjct: 493   176

[Close]

BLAST of MU48683 vs. TrEMBL
Match: F6H502_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02100 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.5e-82
Identity = 151/174 (86.78%), Postives = 160/174 (91.95%), Query Frame = 3


Query: 522  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAK 581
            EERNSLTEKKRRPLYRKGFDVKLIDVNRTC          YTAILACGNYHG+VGYA AK
Sbjct: 324  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTAILACGNYHGVVGYAKAK 383

Query: 582  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 641
            GPA+PIALQKAYEKCFQNLHYVER+EEHTIAHAVQT YKKTKVYLWPA TTTGMKAG+TV
Sbjct: 384  GPAIPIALQKAYEKCFQNLHYVERYEEHTIAHAVQTTYKKTKVYLWPAQTTTGMKAGRTV 443

Query: 642  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 701
            QT+LNLAGFKNVKSKV+GSRNP NT++ALFKALNAIETPKD+QEKFGRTVVEKY
Sbjct: 444  QTILNLAGFKNVKSKVIGSRNPHNTVKALFKALNAIETPKDVQEKFGRTVVEKY 497

Query: 702   761
            
Sbjct: 504   497

Query: 762   821
            
Sbjct: 564   497

Query: 822   881
            
Sbjct: 624   497

Query: 882   941
            
Sbjct: 684   497

Query: 942   1001
            
Sbjct: 744   497

Query: 1002  1044
            
Sbjct: 804   497

[Close]

BLAST of MU48683 vs. TrEMBL
Match: F6H502_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02100 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.2e-30
Identity = 73/113 (64.60%), Postives = 87/113 (76.99%), Query Frame = 1


Query: 178 EKFMLQQKLNRAMRIVEWKEAYDPNDPANYGAIQRRQ*GPSVNLEEQSEFAKQKRTIQG- 237
           +KF+LQQKLNRA+R++EWKEAYDPN+PANYG IQ +Q GP+V+L E + F K+K+ IQG 
Sbjct: 207 DKFILQQKLNRAVRLIEWKEAYDPNNPANYGYIQHQQVGPNVDLLEHAGFEKEKQMIQGA 266

Query: 238 -IXXXXXXXXXXXXXXXXILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEI 297
            +                ILLEKLNAIDKKLEEKLAELDHTFGKKGK+LEEEI
Sbjct: 267 EMDEDDDGEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKLLEEEI 319

Query: 298  357
           
Sbjct: 327  319

Query: 358  417
           
Sbjct: 387  319

Query: 418  477
           
Sbjct: 447  319

Query: 478  511
           
Sbjct: 507  319

HSP 2 Score: 312.0 bits (798), Expect = 9.6e-82
Identity = 150/174 (86.21%), Postives = 160/174 (91.95%), Query Frame = 3


Query: 522  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAK 581
            EERN+LTEKKRRPLYRKGFDVKLIDVNRTC          YTA+LACGNYHG+VG+A AK
Sbjct: 332  EERNALTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVIKYTAMLACGNYHGVVGFAKAK 391

Query: 582  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 641
            GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQT YKKTKVYLWPAST TGMKAG+TV
Sbjct: 392  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTNYKKTKVYLWPASTRTGMKAGRTV 451

Query: 642  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 701
            QT+LNLAGFKNVKSKV+GSRNP NT++ALFKALNAIETPKD+QEKFGRTVVEKY
Sbjct: 452  QTILNLAGFKNVKSKVIGSRNPHNTVKALFKALNAIETPKDVQEKFGRTVVEKY 505

Query: 702   761
            
Sbjct: 512   505

Query: 762   821
            
Sbjct: 572   505

Query: 822   881
            
Sbjct: 632   505

Query: 882   941
            
Sbjct: 692   505

Query: 942   1001
            
Sbjct: 752   505

Query: 1002  1044
            
Sbjct: 812   505

[Close]

BLAST of MU48683 vs. TrEMBL
Match: A0A059DE89_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00913 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31
Identity = 70/111 (63.06%), Postives = 86/111 (77.48%), Query Frame = 1


Query: 178 EKFMLQQKLNRAMRIVEWKEAYDPNDPANYGAIQRRQ*GPSVNLEEQSEFAKQKRTIQGI 237
           EKF+LQQKLNRAMR+++WKEAYDPN+PANYG IQ  Q GPSV+L +Q+ F K+++ IQG+
Sbjct: 217 EKFILQQKLNRAMRLIDWKEAYDPNNPANYGVIQHEQVGPSVDLLDQAGFEKERQVIQGV 276

Query: 238 XXXXXXXXXXXXXXXXILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEI 297
                           +L+EK+N IDKKLEEKLA+LDHTFGKKGKVLEEEI
Sbjct: 277 DDDEDEEFDDMKEKDDMLIEKINEIDKKLEEKLAQLDHTFGKKGKVLEEEI 327

Query: 298  357
           
Sbjct: 337  327

Query: 358  417
           
Sbjct: 397  327

Query: 418  477
           
Sbjct: 457  327

Query: 478  511
           
Sbjct: 517  327

HSP 2 Score: 308.5 bits (789), Expect = 1.1e-80
Identity = 147/174 (84.48%), Postives = 160/174 (91.95%), Query Frame = 3


Query: 522  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAK 581
            EERN+LTEKKRRPLYRKGFDVKLIDVNRTC          YTA+LACGNYHG+VG+A AK
Sbjct: 370  EERNALTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTAMLACGNYHGVVGFAKAK 429

Query: 582  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 641
            GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHA+QT+YKKTKVYLWPA T TGMKAG+TV
Sbjct: 430  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTV 489

Query: 642  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 701
            QT+L+LAGFKNVKSKVVGSRNP NT++ALFKALNAIETPKD++EKFGRTVVEKY
Sbjct: 490  QTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVEKY 543

Query: 702   761
            
Sbjct: 550   543

Query: 762   821
            
Sbjct: 610   543

Query: 822   881
            
Sbjct: 670   543

Query: 882   941
            
Sbjct: 730   543

Query: 942   1001
            
Sbjct: 790   543

Query: 1002  1044
            
Sbjct: 850   543

[Close]

BLAST of MU48683 vs. TrEMBL
Match: V4VE22_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031158mg PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.9e-29
Identity = 70/112 (62.50%), Postives = 83/112 (74.11%), Query Frame = 1


Query: 178 EKFMLQQKLNRAMRIVEWKEAYDPNDPANYGAIQRRQ*GPSVNLEEQSEFAKQKRTIQ-G 237
           +KFMLQQKLNRAMR+VEWKE YDPN+P NYG I+  Q GP+V+  E +E  ++KR +Q G
Sbjct: 254 DKFMLQQKLNRAMRLVEWKEVYDPNNPTNYGVIRHEQAGPNVDAVENAEMDEEKRLLQGG 313

Query: 238 IXXXXXXXXXXXXXXXXILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEI 297
           +                ILLE+LNAIDKKLEEKLAELDHTFGKKGK+LEEEI
Sbjct: 314 VDDDDEEEFDDMKERDDILLERLNAIDKKLEEKLAELDHTFGKKGKLLEEEI 365

Query: 298  357
           
Sbjct: 374  365

Query: 358  417
           
Sbjct: 434  365

Query: 418  477
           
Sbjct: 494  365

Query: 478  511
           
Sbjct: 554  365

HSP 2 Score: 308.5 bits (789), Expect = 1.1e-80
Identity = 147/174 (84.48%), Postives = 159/174 (91.38%), Query Frame = 3


Query: 522  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAK 581
            EERN +TEKKRRPLYRKGFDVK+I+VNRTC          Y+AILACGNYHG+VGYA AK
Sbjct: 328  EERNDVTEKKRRPLYRKGFDVKIINVNRTCKVTKGGQVVKYSAILACGNYHGVVGYAKAK 387

Query: 582  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 641
            GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHA+QT YKKTKVYLWPAST TGMKAG+TV
Sbjct: 388  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQTTYKKTKVYLWPASTRTGMKAGRTV 447

Query: 642  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 701
            QT+LNLAGFKNVKSKVVGSRNP NT++ALFK+LNAIETPKD+QEKFGRTVVEKY
Sbjct: 448  QTILNLAGFKNVKSKVVGSRNPHNTVKALFKSLNAIETPKDVQEKFGRTVVEKY 501

Query: 702   761
            
Sbjct: 508   501

Query: 762   821
            
Sbjct: 568   501

Query: 822   881
            
Sbjct: 628   501

Query: 882   941
            
Sbjct: 688   501

Query: 942   1001
            
Sbjct: 748   501

Query: 1002  1044
            
Sbjct: 808   501

[Close]

BLAST of MU48683 vs. TrEMBL
Match: M5X2B8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004553mg PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.9e-31
Identity = 73/111 (65.77%), Postives = 84/111 (75.68%), Query Frame = 1


Query: 178 EKFMLQQKLNRAMRIVEWKEAYDPNDPANYGAIQRRQ*GPSVNLEEQSEFAKQKRTIQGI 237
           +KF+LQQKLNRAMR+V+WKEA+DPN+PANYG IQ  Q   SV+L E + F K+K+ IQG+
Sbjct: 213 DKFILQQKLNRAMRLVQWKEAFDPNNPANYGVIQHEQVDSSVDLLEHAGFEKEKQIIQGV 272

Query: 238 XXXXXXXXXXXXXXXXILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEI 297
                           ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEI
Sbjct: 273 DDDDDEEFNDMKEKDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEI 323

Query: 298  357
           
Sbjct: 333  323

Query: 358  417
           
Sbjct: 393  323

Query: 418  477
           
Sbjct: 453  323

Query: 478  511
           
Sbjct: 513  323

HSP 2 Score: 308.1 bits (788), Expect = 1.4e-80
Identity = 145/174 (83.33%), Postives = 159/174 (91.38%), Query Frame = 3


Query: 522  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAK 581
            EERNSLTEKKRRP+YRKGFDVKLIDVNRTC          YTAILACGNYHG++G+A AK
Sbjct: 320  EERNSLTEKKRRPMYRKGFDVKLIDVNRTCKVTKGGQVVKYTAILACGNYHGVIGFAKAK 379

Query: 582  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 641
            GPA+P+ALQKAYEKCFQNLHYVERHEEHTIAHA+QTAYKKTKVYLWPA T TGMKAG+ V
Sbjct: 380  GPAIPVALQKAYEKCFQNLHYVERHEEHTIAHAIQTAYKKTKVYLWPAPTRTGMKAGRIV 439

Query: 642  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 701
            QT+L+LAGFKNVKSKV+GSRNP NT++ALFKALNAIETPKD+QEKFGRTVVEKY
Sbjct: 440  QTILHLAGFKNVKSKVIGSRNPHNTVKALFKALNAIETPKDVQEKFGRTVVEKY 493

Query: 702   761
            
Sbjct: 500   493

Query: 762   821
            
Sbjct: 560   493

Query: 822   881
            
Sbjct: 620   493

Query: 882   941
            
Sbjct: 680   493

Query: 942   1001
            
Sbjct: 740   493

Query: 1002  1044
            
Sbjct: 800   493

[Close]

BLAST of MU48683 vs. TAIR10
Match: AT1G64880.1 (AT1G64880.1 Ribosomal protein S5 family protein)

HSP 1 Score: 266.5 bits (680), Expect = 2.3e-71
Identity = 123/174 (70.69%), Postives = 144/174 (82.76%), Query Frame = 3


Query: 522  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAK 581
            E+RN+LTEKKR+PLYRKG+DV +IDV + C          YTA++ CGNY GI+GYA AK
Sbjct: 340  EDRNALTEKKRQPLYRKGYDVHVIDVKKVCKVTKGGRVERYTALMVCGNYEGIIGYAKAK 399

Query: 582  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 641
                  A+QKAYEKCFQNLHYVERHEEHTIAHA+QT+YKKTK+YLWPA TTTGMKAG+ V
Sbjct: 400  AETGQSAMQKAYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVV 459

Query: 642  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 701
            +T+L LAGFKN+KSKV+GSRN  NT++A+ KALNA+ETPKD+QEKFGRTVVEKY
Sbjct: 460  KTILLLAGFKNIKSKVIGSRNSYNTVKAVLKALNAVETPKDVQEKFGRTVVEKY 513

Query: 702   761
            
Sbjct: 520   513

Query: 762   821
            
Sbjct: 580   513

Query: 822   881
            
Sbjct: 640   513

Query: 882   941
            
Sbjct: 700   513

Query: 942   1001
            
Sbjct: 760   513

Query: 1002  1044
            
Sbjct: 820   513

HSP 2 Score: 111.7 bits (278), Expect = 9.6e-25
Identity = 64/116 (55.17%), Postives = 73/116 (62.93%), Query Frame = 1


Query: 178 EKFMLQQKLNRAMRIVEWKEAYDPNDPANYGAIQRRQ*GPSVNLEEQSEFAKQKRTIQG- 237
           EKF+LQQKLNRAMR+VEWKEA+DPN+PANYG I+R       N++   E  +++    G 
Sbjct: 226 EKFVLQQKLNRAMRLVEWKEAFDPNNPANYGVIERD------NVQGGGEEREERLVADGP 285

Query: 238 ----IXXXXXXXXXXXXXXXXILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEI 297
                                ILLEKLNAIDKKLE KL+ELDHTFGKKGK LEEEI
Sbjct: 286 KDDNDDDDDEEEFDDMKERDDILLEKLNAIDKKLEIKLSELDHTFGKKGKRLEEEI 335

Query: 298  357
           
Sbjct: 346  335

Query: 358  417
           
Sbjct: 406  335

Query: 418  477
           
Sbjct: 466  335

Query: 478  511
           
Sbjct: 526  335

[Close]

BLAST of MU48683 vs. TAIR10
Match: AT2G33800.1 (AT2G33800.1 Ribosomal protein S5 family protein)

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-15
Identity = 50/159 (31.45%), Postives = 74/159 (46.54%), Query Frame = 3


Query: 546  KKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAKGPAVPIAL 605
            K ++   R GF+ +++ V R            + AI+  G+  G VG   AK   V  A+
Sbjct: 137  KPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAV 196

Query: 606  QKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAG 665
            QK+     +N+  V   +  T  H  +  Y   KV L PAS  TG+ AG  V+ VL +AG
Sbjct: 197  QKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 256

Query: 666  FKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFG 725
             +N   K +GS N LN  RA   A+  +   +D+ ++ G
Sbjct: 257  VENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERG 295

Query: 726   785
            
Sbjct: 317   295

Query: 786   845
            
Sbjct: 377   295

Query: 846   905
            
Sbjct: 437   295

Query: 906   965
            
Sbjct: 497   295

Query: 966   1023
            
Sbjct: 557   295

[Close]

BLAST of MU48683 vs. NCBI nr
Match: gi|659125644|ref|XP_008462792.1| (PREDICTED: RNA-binding protein 25 [Cucumis melo])

HSP 1 Score: 327.0 bits (837), Expect = 4.1e-86
Identity = 164/174 (94.25%), Postives = 164/174 (94.25%), Query Frame = 3


Query: 522  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAK 581
            EERNSLTEKKRRPLYRKGFDVKLIDVNRTC          YTAILACGNYHGIVGYATAK
Sbjct: 325  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAK 384

Query: 582  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 641
            GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV
Sbjct: 385  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 444

Query: 642  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 701
            QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY
Sbjct: 445  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 498

Query: 702   761
            
Sbjct: 505   498

Query: 762   821
            
Sbjct: 565   498

Query: 822   881
            
Sbjct: 625   498

Query: 882   941
            
Sbjct: 685   498

Query: 942   1001
            
Sbjct: 745   498

Query: 1002  1044
            
Sbjct: 805   498

[Close]

BLAST of MU48683 vs. NCBI nr
Match: gi|449468275|ref|XP_004151847.1| (PREDICTED: probable 37S ribosomal protein S5, mitochondrial [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 7.0e-86
Identity = 162/174 (93.10%), Postives = 164/174 (94.25%), Query Frame = 3


Query: 522  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAK 581
            EERNSLTEKKRRPLYRKGFDVKLIDVNRTC          YTAILACGNYHGIVGYATAK
Sbjct: 325  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAK 384

Query: 582  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 641
            GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTK+YLWPASTTTGMKAGKTV
Sbjct: 385  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTV 444

Query: 642  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 701
            QTVLNLAGFKNVKSKV+GSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY
Sbjct: 445  QTVLNLAGFKNVKSKVIGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 498

Query: 702   761
            
Sbjct: 505   498

Query: 762   821
            
Sbjct: 565   498

Query: 822   881
            
Sbjct: 625   498

Query: 882   941
            
Sbjct: 685   498

Query: 942   1001
            
Sbjct: 745   498

Query: 1002  1044
            
Sbjct: 805   498

[Close]

BLAST of MU48683 vs. NCBI nr
Match: gi|1009123132|ref|XP_015878378.1| (PREDICTED: uncharacterized protein LOC107414724 [Ziziphus jujuba])

HSP 1 Score: 313.5 bits (802), Expect = 4.7e-82
Identity = 153/174 (87.93%), Postives = 161/174 (92.53%), Query Frame = 3


Query: 522  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAK 581
            EERNSLTEKKRRPLYRKGFDVKLIDVNRTC          YTAILACGNYHG+VGYA AK
Sbjct: 330  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTAILACGNYHGVVGYAKAK 389

Query: 582  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 641
            GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHA+QTAYKKTKVYLWPASTTTGMKAG+TV
Sbjct: 390  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQTAYKKTKVYLWPASTTTGMKAGRTV 449

Query: 642  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 701
            QT+LNLAGFKNVKSKVVGSRNP NT++A+FKALN IETPKD+QEKFGRTVVEKY
Sbjct: 450  QTILNLAGFKNVKSKVVGSRNPHNTVKAVFKALNEIETPKDVQEKFGRTVVEKY 503

Query: 702   761
            
Sbjct: 510   503

Query: 762   821
            
Sbjct: 570   503

Query: 822   881
            
Sbjct: 630   503

Query: 882   941
            
Sbjct: 690   503

Query: 942   1001
            
Sbjct: 750   503

Query: 1002  1044
            
Sbjct: 810   503

[Close]

BLAST of MU48683 vs. NCBI nr
Match: gi|302143430|emb|CBI21991.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 310.8 bits (795), Expect = 3.1e-81
Identity = 151/174 (86.78%), Postives = 160/174 (91.95%), Query Frame = 3


Query: 522  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAK 581
            EERNSLTEKKRRPLYRKGFDVKLIDVNRTC          YTAILACGNYHG+VGYA AK
Sbjct: 229  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTAILACGNYHGVVGYAKAK 288

Query: 582  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 641
            GPA+PIALQKAYEKCFQNLHYVER+EEHTIAHAVQT YKKTKVYLWPA TTTGMKAG+TV
Sbjct: 289  GPAIPIALQKAYEKCFQNLHYVERYEEHTIAHAVQTTYKKTKVYLWPAQTTTGMKAGRTV 348

Query: 642  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 701
            QT+LNLAGFKNVKSKV+GSRNP NT++ALFKALNAIETPKD+QEKFGRTVVEKY
Sbjct: 349  QTILNLAGFKNVKSKVIGSRNPHNTVKALFKALNAIETPKDVQEKFGRTVVEKY 402

Query: 702   761
            
Sbjct: 409   402

Query: 762   821
            
Sbjct: 469   402

Query: 822   881
            
Sbjct: 529   402

Query: 882   941
            
Sbjct: 589   402

Query: 942   1001
            
Sbjct: 649   402

Query: 1002  1044
            
Sbjct: 709   402

[Close]

BLAST of MU48683 vs. NCBI nr
Match: gi|225446625|ref|XP_002276769.1| (PREDICTED: uncharacterized protein LOC100267778 [Vitis vinifera])

HSP 1 Score: 310.8 bits (795), Expect = 3.1e-81
Identity = 151/174 (86.78%), Postives = 160/174 (91.95%), Query Frame = 3


Query: 522  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCXXXXXXXXXXYTAILACGNYHGIVGYATAK 581
            EERNSLTEKKRRPLYRKGFDVKLIDVNRTC          YTAILACGNYHG+VGYA AK
Sbjct: 324  EERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTAILACGNYHGVVGYAKAK 383

Query: 582  GPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTV 641
            GPA+PIALQKAYEKCFQNLHYVER+EEHTIAHAVQT YKKTKVYLWPA TTTGMKAG+TV
Sbjct: 384  GPAIPIALQKAYEKCFQNLHYVERYEEHTIAHAVQTTYKKTKVYLWPAQTTTGMKAGRTV 443

Query: 642  QTVLNLAGFKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKY 701
            QT+LNLAGFKNVKSKV+GSRNP NT++ALFKALNAIETPKD+QEKFGRTVVEKY
Sbjct: 444  QTILNLAGFKNVKSKVIGSRNPHNTVKALFKALNAIETPKDVQEKFGRTVVEKY 497

Query: 702   761
            
Sbjct: 504   497

Query: 762   821
            
Sbjct: 564   497

Query: 822   881
            
Sbjct: 624   497

Query: 882   941
            
Sbjct: 684   497

Query: 942   1001
            
Sbjct: 744   497

Query: 1002  1044
            
Sbjct: 804   497

The following BLAST results are available for this feature:

BLAST of MU48683 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RS5_PSEE4	1.6e-21	37.82	30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) GN=rpsE PE=3 SV...	[more]
RS5_PSEF5	2.1e-21	37.18	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)...	[more]
RS5_PSEFS	2.1e-21	37.82	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) GN=rpsE PE=3 ...	[more]
RS5_BLOPB	3.6e-21	36.42	30S ribosomal protein S5 OS=Blochmannia pennsylvanicus (strain BPEN) GN=rpsE PE=...	[more]
RS5_XANOP	4.6e-21	35.76	30S ribosomal protein S5 OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=rps...	[more]

BLAST of MU48683 vs. TrEMBL


Match Name	E-value	Identity	Description
F6H502_VITVI	1.5e-82	86.78	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02100 PE=3 SV=...	[more]
F6H502_VITVI	2.2e-30	64.60	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02100 PE=3 SV=...	[more]
A0A059DE89_EUCGR	1.2e-31	63.06	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00913 PE=3 SV=1	[more]
V4VE22_9ROSI	1.9e-29	62.50	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031158mg PE=3 SV=1	[more]
M5X2B8_PRUPE	5.9e-31	65.77	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004553mg PE=3 SV=1	[more]

BLAST of MU48683 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64880.1	2.3e-71	70.69	Ribosomal protein S5 family protein	[more]
AT2G33800.1	3.1e-15	31.45	Ribosomal protein S5 family protein	[more]

BLAST of MU48683 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125644\|ref\|XP_008462792.1\|	4.1e-86	94.25	PREDICTED: RNA-binding protein 25 [Cucumis melo]	[more]
gi\|449468275\|ref\|XP_004151847.1\|	7.0e-86	93.10	PREDICTED: probable 37S ribosomal protein S5, mitochondrial [Cucumis sativus]	[more]
gi\|1009123132\|ref\|XP_015878378.1\|	4.7e-82	87.93	PREDICTED: uncharacterized protein LOC107414724 [Ziziphus jujuba]	[more]
gi\|302143430\|emb\|CBI21991.3\|	3.1e-81	86.78	unnamed protein product [Vitis vinifera]	[more]
gi\|225446625\|ref\|XP_002276769.1\|	3.1e-81	86.78	PREDICTED: uncharacterized protein LOC100267778 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000851	Ribosomal_S5
IPR005324	Ribosomal_S5_C
IPR013810	Ribosomal_S5_N
IPR014720	dsRBD_dom
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR020568	Ribosomal_S5_D2-typ_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003723	RNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C024747	MELO3C024747	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
15D09G02	15D09G02	EST
PSI23H08	PSI23H08	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 16..258 score: 3.0E
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 183..251 score: 2.0
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 105..169 score: 2.8
IPR013810	Ribosomal protein S5, N-terminal	PROFILE	PS50881	S5_DSRBD	coord: 105..168 score: 16
IPR014720	Double-stranded RNA-binding domain	GENE3D	G3DSA:3.30.160.20		coord: 103..166 score: 8.9
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	G3DSA:3.30.230.10		coord: 170..253 score: 3.9
IPR020568	Ribosomal protein S5 domain 2-type fold	unknown	SSF54211	Ribosomal protein S5 domain 2-like	coord: 174..252 score: 4.3
None	No IPR available	unknown	Coil	Coil	coord: 50..70 score: -coord: 75..98 scor
None	No IPR available	PANTHER	PTHR13718:SF63	SUBFAMILY NOT NAMED	coord: 16..258 score: 3.0E
None	No IPR available	unknown	SSF54768	dsRNA-binding domain-like	coord: 100..170 score: 4.71