MU48368 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU48368
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionEID1-like F-box protein 2
Locationchr6 : 22975265 .. 22980520 (+)
Sequence length814
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GGCCACCCCCTTTCTGTTCATTCTTCTTGGCCGGCGAGCCTCAGACGGCAAAGACCCCTATGAATTCACGTTGACACGAGCAGACACCCTCACGTTCAAGGTGTTACTCACGAACCCACTTTCTCTCCGTCACTTCTGGCGAGCCGTGGCGGTGAAACCCACGAGTCATTTCTGCAATGGTAACGCGATTCTCCATGAAGCTCCATGGGTTTTATGGTCGTTGTGTAGCCAAGCCGATGTGACACCCATGAGACGAGAACTCACTTTGTACACCTTCCCATCAATGTCTCACCGTTTCGACAGGTTTCAGTATTGACCCACACTTCGATTGGCTTCAAATCGTTGTACCCATATCGTTTAAGGTCCAGATCTGCCAAGTTCCACGTTTTTGGACACCCGCCAGCAAGGTTTAGAGCCTCTTCGATAAGATTCGGCTCTCTAAAGGATGTTCTTTCAAGGAAGCAAATTTTGAATTGAGAATTATAGTATTGTTGATCGAGATGAAGGATCCTGTGAAAGTTTTGAAGAAAGTGAAGTTTGGCGTTCAGGCATAGGTCATCAAAAGATGTTTACATTAGGATTTGATAGTTTGACTCAGGACTTCTTTGTAATAAGTTGCTTCTGCTGATTTGTATTAATTAATAGTTCTCAGATGCTCATGAAGGAATGATTCTGACAAAGCAATACCGGTGTGTGCATTCAGCAAGCTGCCAGTGCACCAAGGGGCACCTCAGTGAGGATGCAATATTCCTAGTATTCCAGCATTTGAACTGGAACCCGAAATTGATTGCTACTCTTTCCTGTGCATGCAAAT
Homology
[Close]
BLAST of MU48368 vs. Swiss-Prot
Match: EDL1_ARATH (EID1-like F-box protein 1 OS=Arabidopsis thaliana GN=EDL1 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.8e-17
Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MIL KQY C HS SCQCTKGHL+ED + LVFQHLNWNPKL+ATLSC C+
Sbjct: 1   MILPKQYCCTHSPSCQCTKGHLNEDVLLLVFQHLNWNPKLVATLSCVCR 49

Query: 727  786
           
Sbjct: 61   49

Query: 787  814
           
Sbjct: 121  49

[Close]
BLAST of MU48368 vs. Swiss-Prot
Match: EDL2_ARATH (EID1-like F-box protein 2 OS=Arabidopsis thaliana GN=EDL2 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.0e-17
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MI+ KQYRC+HSA+C CTKGHLSE+ +FL+ QHLNWNP +IATLSC CK
Sbjct: 1   MIIAKQYRCIHSATCHCTKGHLSEEVLFLMVQHLNWNPNVIATLSCVCK 49

Query: 727  786
           
Sbjct: 61   49

Query: 787  814
           
Sbjct: 121  49

[Close]
BLAST of MU48368 vs. TrEMBL
Match: A0A0A0L849_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G516490 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.2e-21
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK
Sbjct: 1   MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 49

Query: 727  786
           
Sbjct: 61   49

Query: 787  814
           
Sbjct: 121  49

[Close]
BLAST of MU48368 vs. TrEMBL
Match: A0A0S3T8P1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G052500 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19
Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MILTKQYRCVHSASCQCTKGHLSED IFLVFQHLNWNP LIATLSCACK
Sbjct: 12  MILTKQYRCVHSASCQCTKGHLSEDVIFLVFQHLNWNPNLIATLSCACK 60

Query: 727  786
           
Sbjct: 72   60

Query: 787  814
           
Sbjct: 132  60

[Close]
BLAST of MU48368 vs. TrEMBL
Match: A0A0L9VNC9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g245800 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19
Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MILTKQYRCVHSASCQCTKGHLSED IFLVFQHLNWNP LIATLSCACK
Sbjct: 1   MILTKQYRCVHSASCQCTKGHLSEDVIFLVFQHLNWNPNLIATLSCACK 49

Query: 727  786
           
Sbjct: 61   49

Query: 787  814
           
Sbjct: 121  49

[Close]
BLAST of MU48368 vs. TrEMBL
Match: A0A0B2PHF2_GLYSO (EID1-like F-box protein 2 OS=Glycine soja GN=glysoja_032015 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.0e-19
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MILTKQYRCVHSASCQCTKGHLSED IFLVFQHLNWNPKLIA LSC CK
Sbjct: 59  MILTKQYRCVHSASCQCTKGHLSEDVIFLVFQHLNWNPKLIAALSCVCK 107

Query: 727  786
           
Sbjct: 119  107

Query: 787  814
           
Sbjct: 179  107

[Close]
BLAST of MU48368 vs. TrEMBL
Match: C6THH5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.0e-19
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MILTKQYRCVHSASCQCTKGHLSED IFLVFQHLNWNPKLIA LSC CK
Sbjct: 1   MILTKQYRCVHSASCQCTKGHLSEDVIFLVFQHLNWNPKLIAALSCVCK 49

Query: 727  786
           
Sbjct: 61   49

Query: 787  814
           
Sbjct: 121  49

[Close]
BLAST of MU48368 vs. TAIR10
Match: AT5G15440.1 (AT5G15440.1 EID1-like 1)

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-18
Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MIL KQY C HS SCQCTKGHL+ED + LVFQHLNWNPKL+ATLSC C+
Sbjct: 1   MILPKQYCCTHSPSCQCTKGHLNEDVLLLVFQHLNWNPKLVATLSCVCR 49

Query: 727  786
           
Sbjct: 61   49

Query: 787  814
           
Sbjct: 121  49

[Close]
BLAST of MU48368 vs. TAIR10
Match: AT5G39360.1 (AT5G39360.1 EID1-like 2)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-18
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MI+ KQYRC+HSA+C CTKGHLSE+ +FL+ QHLNWNP +IATLSC CK
Sbjct: 1   MIIAKQYRCIHSATCHCTKGHLSEEVLFLMVQHLNWNPNVIATLSCVCK 49

Query: 727  786
           
Sbjct: 61   49

Query: 787  814
           
Sbjct: 121  49

[Close]
BLAST of MU48368 vs. NCBI nr
Match: gi|449464252|ref|XP_004149843.1| (PREDICTED: EID1-like F-box protein 2 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 4.5e-21
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK
Sbjct: 1   MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 49

Query: 727  786
           
Sbjct: 61   49

Query: 787  814
           
Sbjct: 121  49

[Close]
BLAST of MU48368 vs. NCBI nr
Match: gi|950926593|ref|XP_014514051.1| (PREDICTED: EID1-like F-box protein 2 [Vigna radiata var. radiata])

HSP 1 Score: 107.1 bits (266), Expect = 5.0e-20
Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MILTKQYRCVHSASCQCTKGHLSED IFLVFQHLNWNP LIATLSCACK
Sbjct: 1   MILTKQYRCVHSASCQCTKGHLSEDVIFLVFQHLNWNPNLIATLSCACK 49

Query: 727  786
           
Sbjct: 61   49

Query: 787  814
           
Sbjct: 121  49

[Close]
BLAST of MU48368 vs. NCBI nr
Match: gi|920716478|gb|KOM56566.1| (hypothetical protein LR48_Vigan10g245800 [Vigna angularis])

HSP 1 Score: 107.1 bits (266), Expect = 5.0e-20
Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MILTKQYRCVHSASCQCTKGHLSED IFLVFQHLNWNP LIATLSCACK
Sbjct: 1   MILTKQYRCVHSASCQCTKGHLSEDVIFLVFQHLNWNPNLIATLSCACK 49

Query: 727  786
           
Sbjct: 61   49

Query: 787  814
           
Sbjct: 121  49

[Close]
BLAST of MU48368 vs. NCBI nr
Match: gi|965616166|dbj|BAU01316.1| (hypothetical protein VIGAN_11052500 [Vigna angularis var. angularis])

HSP 1 Score: 107.1 bits (266), Expect = 5.0e-20
Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MILTKQYRCVHSASCQCTKGHLSED IFLVFQHLNWNP LIATLSCACK
Sbjct: 12  MILTKQYRCVHSASCQCTKGHLSEDVIFLVFQHLNWNPNLIATLSCACK 60

Query: 727  786
           
Sbjct: 72   60

Query: 787  814
           
Sbjct: 132  60

[Close]
BLAST of MU48368 vs. NCBI nr
Match: gi|359807191|ref|NP_001241614.1| (uncharacterized protein LOC100775676 [Glycine max])

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 1 

Query: 667 MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACK 726
           MILTKQYRCVHSASCQCTKGHLSED IFLVFQHLNWNPKLIA LSC CK
Sbjct: 1   MILTKQYRCVHSASCQCTKGHLSEDVIFLVFQHLNWNPKLIAALSCVCK 49

Query: 727  786
           
Sbjct: 61   49

Query: 787  814
           
Sbjct: 121  49

The following BLAST results are available for this feature:
BLAST of MU48368 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EDL1_ARATH1.8e-1777.55EID1-like F-box protein 1 OS=Arabidopsis thaliana GN=EDL1 PE=2 SV=1[more]
EDL2_ARATH3.0e-1773.47EID1-like F-box protein 2 OS=Arabidopsis thaliana GN=EDL2 PE=2 SV=1[more]
BLAST of MU48368 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L849_CUCSA9.2e-21100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G516490 PE=4 SV=1[more]
A0A0S3T8P1_PHAAN1.0e-1995.92Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G052500 PE=... [more]
A0A0L9VNC9_PHAAN1.0e-1995.92Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g245800 PE=4 SV=1[more]
A0A0B2PHF2_GLYSO3.0e-1993.88EID1-like F-box protein 2 OS=Glycine soja GN=glysoja_032015 PE=4 SV=1[more]
C6THH5_SOYBN3.0e-1993.88Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
BLAST of MU48368 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G15440.11.0e-1877.55 EID1-like 1[more]
AT5G39360.11.7e-1873.47 EID1-like 2[more]
BLAST of MU48368 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464252|ref|XP_004149843.1|4.5e-21100.00PREDICTED: EID1-like F-box protein 2 [Cucumis sativus][more]
gi|950926593|ref|XP_014514051.1|5.0e-2095.92PREDICTED: EID1-like F-box protein 2 [Vigna radiata var. radiata][more]
gi|920716478|gb|KOM56566.1|5.0e-2095.92hypothetical protein LR48_Vigan10g245800 [Vigna angularis][more]
gi|965616166|dbj|BAU01316.1|5.0e-2095.92hypothetical protein VIGAN_11052500 [Vigna angularis var. angularis][more]
gi|359807191|ref|NP_001241614.1|1.5e-1993.88uncharacterized protein LOC100775676 [Glycine max][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C014930MELO3C014930gene
MELO3C014929MELO3C014929gene
MELO3C014931MELO3C014931gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
AI29D11AI29D11EST
PEa0015A18PEa0015A18EST