MU48129 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU48129
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNo hit
Locationchr10 : 24808359 .. 24808874 (+)
Sequence length515
The following sequences are available for this feature:

transcribed_cluster sequence

AAACATTAAGTCAGAAGCCAAGCAATCACACGTTCTTCTTCCACCACAAATTCAAAAACCCAACACAATGCTCAAAGCCACTAAGAAGAAACTCAAAGGATTATGGTCCAAAATGAAGAAGAAAAAACCAAACAAAACCCAAACAAATTGCTACCAATATTGCTGCTCTTGCCATTGCTCCTCCTCATCCCATCTGCATCATCAGCCCTCAGCTCCCCCACTTCCGCCATGGCTCAACGAGGATCCCACCTTTCTGCCGCCTCCAACGCAATCGCAATTTGAACATCCAGACAGAGCTGATGGAATGGTGACTAATCAGTGGTCGTACCAGCAGTACTTGGTGGCAGAGCCGGTTTACGGGGTGCCGATCATTGTGGAAACAGAAAGTAGAAGAGATCAGAAATGGAAAAGGTTGATTAAGTTATTTGATTGCTTCTGCCCCTGTTTTGGCATTACACAACAACTTTACTACATACCATAGAAATTCATTTTAGATTTTAGTTTCAACTTATTAT
Library categoryESTs
melon VFLP2 library2
BLAST of MU48129 vs. TrEMBL
Match: A0A0A0KJG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G077760 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.4e-35
Identity = 72/87 (82.76%), Postives = 75/87 (86.21%), Query Frame = 2

Query: 230 WLNEDPTFLPPPTQSQFEHPDRADGM----VTNQWSYQQYLVAEPVYGVPIIVETESRRD 289
           WLN+ PTFLPP TQSQFEHPD AD M    V NQWSYQQYLVAEPVYGVPIIVETES R 
Sbjct: 84  WLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRG 143

Query: 290 QKWKRLIKLFDCFCPCFGITQQLYYIP 349
           QKWKRLIKLF+C CPCFGITQQLYY+P
Sbjct: 144 QKWKRLIKLFECLCPCFGITQQLYYVP 170

Query: 350 409
           
Sbjct: 204 170

Query: 410 469
           
Sbjct: 264 170

Query: 470 479
           
Sbjct: 324 170

BLAST of MU48129 vs. NCBI nr
Match: gi|659121311|ref|XP_008460596.1| (PREDICTED: uncharacterized protein LOC103499377 [Cucumis melo])

HSP 1 Score: 186.0 bits (471), Expect = 5.4e-44
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 2

Query: 230 WLNEDPTFLPPPTQSQFEHPDRADGMVTNQWSYQQYLVAEPVYGVPIIVETESRRDQKWK 289
           WLNEDPTFLPPPTQSQFEHPDRADGMVTNQWSYQQYLVAEPVYGVPIIV+TESRRDQKWK
Sbjct: 55  WLNEDPTFLPPPTQSQFEHPDRADGMVTNQWSYQQYLVAEPVYGVPIIVKTESRRDQKWK 114

Query: 290 RLIKLFDCFCPCFGITQQLYYIP 349
           RLIKLFDCFCPCFGITQQLYYIP
Sbjct: 115 RLIKLFDCFCPCFGITQQLYYIP 137

Query: 350 409
           
Sbjct: 175 137

Query: 410 469
           
Sbjct: 235 137

Query: 470 479
           
Sbjct: 295 137

BLAST of MU48129 vs. NCBI nr
Match: gi|700194531|gb|KGN49708.1| (hypothetical protein Csa_5G077760 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 2.0e-35
Identity = 72/87 (82.76%), Postives = 75/87 (86.21%), Query Frame = 2

Query: 230 WLNEDPTFLPPPTQSQFEHPDRADGM----VTNQWSYQQYLVAEPVYGVPIIVETESRRD 289
           WLN+ PTFLPP TQSQFEHPD AD M    V NQWSYQQYLVAEPVYGVPIIVETES R 
Sbjct: 84  WLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRG 143

Query: 290 QKWKRLIKLFDCFCPCFGITQQLYYIP 349
           QKWKRLIKLF+C CPCFGITQQLYY+P
Sbjct: 144 QKWKRLIKLFECLCPCFGITQQLYYVP 170

Query: 350 409
           
Sbjct: 204 170

Query: 410 469
           
Sbjct: 264 170

Query: 470 479
           
Sbjct: 324 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KJG0_CUCSA5.4e-3582.76Uncharacterized protein OS=Cucumis sativus GN=Csa_5G077760 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659121311|ref|XP_008460596.1|5.4e-4498.80PREDICTED: uncharacterized protein LOC103499377 [Cucumis melo][more]
gi|700194531|gb|KGN49708.1|2.0e-3582.76hypothetical protein Csa_5G077760 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C022933MELO3C022933gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
GA40YH09FM1GA40YH09FM1EST
GA43YI01FM1GA43YI01FM1EST