MU47948 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU47948
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRNA polymerase 1 specific transcription initiation factor RRN3 family protein
Locationchr6 : 1099821 .. 1102297 (+)
Sequence length1003
The following sequences are available for this feature:

transcribed_cluster sequence

TTTTTGACAACCTCTTTGGTTACTACTATATTGAAAAGATTGGTGGATTGGTGTTTAGAATATGGCGAAACACTGAATGTTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGGCCATAATGTATGTGCTTTGCTTCCGGATGAGGTCCATTTTGGAAATTCCACGTCTGAAGTCCCAACTTCTGCTTATGCCCATTGGTCCTCTCTTGACGCATAGATTAAGCCCACTGAAGGTTTGCCTACCATCTATTGTTGAGGAATTTCTTCAGCAGGCAAAAGTTGCTAATTTATTTACACCGTCGGAGACTTTTATATTCAATGGTTTGCTGGACTCTGAATATTCAAGAAGTTTTGGTGGATTAGAAAGGCTCGACATGTTTTTTCCATTTGACCCTTGCTTATTAAAAAAATGTGACAGATATCTTCGGCCACATTTTGTATACTGGTCGATGGTCAGACCTACCTATGCCGAAGAAGAAGAACAAGAGGAAGATGGAGGTAGCAGCGATGAGGATGCAGAGGTTTTTCCAGATATAATTGAGGAAAACCTTATGGATGATGTAGCAATGGCAAGAAGCTACGACGACCAAGATTTTGATCTTGATTCTGGATTAAACAATATGTCCATCACACCAAGAAATTCGCTTCAGTACCGGCACGATTTTGTTAAGATGCCCTCAAGAATCCGACCCTCGATGAGTCCAGAATCTTTGTGATAACATATCTCAGCTTGAATAGTTAACTGGAATGCAAATGAGAATGGCGCTGCGCATTCATATTTCACAAAATGGTGATTGCAAATCTAGTTTTGGTTTTGGGGTTGTCTTCTTTACTTCAAATGTATGATAATTAGGTGGGTTAGAATCGTTGTTGGGGGTTCAGTTTTGAATTATTCCTTTTCTAGCTTTGCAGCGCTTTGATTATTGCCCTTGTTTACACTCCAGGATTGTAATAGTTTTACCAAGTGATGAAATACTGCCAAAATTTTGT
BLAST of MU47948 vs. Swiss-Prot
Match: RRN3_MOUSE (RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus GN=Rrn3 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-10
Identity = 51/168 (30.36%), Postives = 71/168 (42.26%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKA------HKVFYSGCQAIMYVLCFRMRS 60
           F+    V T L  LV+W   Y    N D   KA      H  FYS CQA+ Y + FR + 
Sbjct: 414 FIPLITVKTCLDLLVNWLHMY--LTNQDSGTKAFCDVALHGPFYSACQAVFYTVVFRHKQ 473

Query: 61  ILE--IPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNG 120
           +L   + +    L  +    ++  +L+PLK+CLP +V  F        L         N 
Sbjct: 474 LLSGNLKQGLQYLQSLNFERIVLSQLNPLKICLPQVVNFFAAITNKYQLVFCYTIMERNS 533

Query: 121 LLDSEYSRSFGGLER-------LDMFFPFDPCLLKKCDRYLRPHFVYW 180
                  RS  G +        LD FFPFDPC+LK+  +++ P +  W
Sbjct: 534 RQMLPVIRSTAGGDSVQTCTNPLDTFFPFDPCVLKRSKKFIDPIYQIW 579

Query: 181 240
           
Sbjct: 594 579

Query: 241 300
           
Sbjct: 654 579

Query: 301 360
           
Sbjct: 714 579

Query: 361 420
           
Sbjct: 774 579

Query: 421 460
           
Sbjct: 834 579

BLAST of MU47948 vs. Swiss-Prot
Match: RRN3_HUMAN (RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens GN=RRN3 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.4e-10
Identity = 51/168 (30.36%), Postives = 70/168 (41.67%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKA------HKVFYSGCQAIMYVLCFRMRS 60
           F+    V + L  LV+W   Y    N D   KA      H  FYS CQA+ Y   FR + 
Sbjct: 416 FIPLITVKSCLDLLVNWLHIYLN--NQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQ 475

Query: 61  ILE--IPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNG 120
           +L   +      L  +    ++  +L+PLK+CLPS+V  F        L         N 
Sbjct: 476 LLSGNLKEGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNN 535

Query: 121 LLDSEYSRSFGGLER-------LDMFFPFDPCLLKKCDRYLRPHFVYW 180
                  RS  G +        LD FFPFDPC+LK+  +++ P +  W
Sbjct: 536 RQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVW 581

Query: 181 240
           
Sbjct: 596 581

Query: 241 300
           
Sbjct: 656 581

Query: 301 360
           
Sbjct: 716 581

Query: 361 420
           
Sbjct: 776 581

Query: 421 460
           
Sbjct: 836 581

BLAST of MU47948 vs. Swiss-Prot
Match: RRN3_PONAB (RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii GN=RRN3 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.6e-10
Identity = 53/169 (31.36%), Postives = 71/169 (42.01%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKA------HKVFYSGCQAIMYVLCFRMRS 60
           F+    V + L  LV+W   Y    N D   KA      H  FYS CQA+ Y   FR + 
Sbjct: 415 FIPLITVRSCLDLLVNWLHIYLN--NQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQ 474

Query: 61  ILEIPRLKSQLLLMP---IGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFN 120
           +L    LK  L  +       ++  +L+PLK+CLPS+V  F        L         N
Sbjct: 475 LLS-GNLKEGLRYLQSLNFEWIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERN 534

Query: 121 GLLDSEYSRSFGGLER-------LDMFFPFDPCLLKKCDRYLRPHFVYW 180
                   RS  G +        LD FFPFDPC+LK+  +++ P +  W
Sbjct: 535 NRQMLPVIRSTAGGDSVQTCTNPLDTFFPFDPCVLKRSKKFIDPIYQVW 580

Query: 181 240
           
Sbjct: 595 580

Query: 241 300
           
Sbjct: 655 580

Query: 301 360
           
Sbjct: 715 580

Query: 361 420
           
Sbjct: 775 580

Query: 421 460
           
Sbjct: 835 580

BLAST of MU47948 vs. TrEMBL
Match: A0A0A0L7G6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122360 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.3e-114
Identity = 209/241 (86.72%), Postives = 216/241 (89.63%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FLTTSLVTTILKRLVDWCLEYG+TLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR
Sbjct: 384 FLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 443

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
           LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL+QAKVANLFTPSE FIFNGLL+S+YSR
Sbjct: 444 LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSR 503

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTY-XXXXXXXXXXXXXXXXXXV 180
           SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTY                   +
Sbjct: 504 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYDEEEEEEEDDGGSSDEDAEI 563

Query: 181 FPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPRNSLQYRHDFVKMPSRIRPSMSP 240
           FPD I+ENLMDD AMA SYDDQDFDLDSGLN MSITPRNSLQYR DFV+MPSRIRPSMSP
Sbjct: 564 FPDRIDENLMDDEAMAISYDDQDFDLDSGLNKMSITPRNSLQYRCDFVQMPSRIRPSMSP 623

Query: 241 E 300
           E
Sbjct: 624 E 624

Query: 301 360
           
Sbjct: 684 624

Query: 361 420
           
Sbjct: 744 624

Query: 421 480
           
Sbjct: 804 624

Query: 481 540
           
Sbjct: 864 624

Query: 541 600
           
Sbjct: 924 624

Query: 601 660
           
Sbjct: 984 624

Query: 661 720
           
Sbjct: 1044 624

BLAST of MU47948 vs. TrEMBL
Match: F6I0C5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01700 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.5e-78
Identity = 157/248 (63.31%), Postives = 184/248 (74.19%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FLT S V  IL+RLV WCLEY +  + D NPKAH+VFYSGCQAIMYVLCFRMRS++ +P 
Sbjct: 385 FLTASFVANILERLVVWCLEYCKIHDGDINPKAHQVFYSGCQAIMYVLCFRMRSMMNVPH 444

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
           L+SQLLL+P+  +L H LSPLKVCLPSIVEEFL+QAK A LFT SETFIF+ LL+SE SR
Sbjct: 445 LRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSR 504

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYXXXXXXXXXXXXXXXXXXVF 180
           +FGG+ERLDMFFPFDPCLLKKCDR++RP+FVYWSM+R TY                    
Sbjct: 505 AFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTYDDGEDSSDEEPAEDYEAS-H 564

Query: 181 PDIIEENLMDDVAMARSYDDQDFDLDS---GLNNMSITPRNSLQYRHD---FVKMPSRIR 240
           PD    ++M+D AMARSYD  D +LD     +N MSITP+NSL YR      V+MPSRIR
Sbjct: 565 PD----DVMNDDAMARSYDSHDLELDEFDHSMNKMSITPKNSLYYRFGDELKVQMPSRIR 624

Query: 241 PSMSPESL 300
           PS SPESL
Sbjct: 625 PSTSPESL 627

Query: 301 360
           
Sbjct: 685 627

Query: 361 420
           
Sbjct: 745 627

Query: 421 480
           
Sbjct: 805 627

Query: 481 540
           
Sbjct: 865 627

Query: 541 600
           
Sbjct: 925 627

Query: 601 660
           
Sbjct: 985 627

Query: 661 720
           
Sbjct: 1045 627

Query: 721 727
           
Sbjct: 1105 627

BLAST of MU47948 vs. TrEMBL
Match: A0A067FW78_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0074032mg PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.6e-75
Identity = 156/253 (61.66%), Postives = 181/253 (71.54%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FL+   + ++LKRLVDWCLEY   L  D NPKAH+VFYSGCQAIMYVLCFRMRSI++IPR
Sbjct: 52  FLSPCFIVSLLKRLVDWCLEYCNILGGDINPKAHRVFYSGCQAIMYVLCFRMRSIMDIPR 111

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
           LKSQLLLMP+  +L H L+PLKVCLPS+V EFLQQ+K A LFT SETF+FN LL+SE SR
Sbjct: 112 LKSQLLLMPLETVLKHDLNPLKVCLPSVVSEFLQQSKAARLFTVSETFVFNDLLESELSR 171

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYXXXXXXXXXXXXXXXXXXVF 180
           +FGGLERLDMFFPFDPCLLKK D ++RP+FVYWSMV+  Y                    
Sbjct: 172 AFGGLERLDMFFPFDPCLLKKSDSFIRPNFVYWSMVKTAYHGDEEDNSD----------- 231

Query: 181 PDIIEEN---LMDDVAMARSYDDQDFDLDS---GLNNMSITPRNSLQYRHDF-----VKM 240
            D+ E+N   +M D  M RS D+QD DLD     LN MSITP+NS   R D      +KM
Sbjct: 232 EDVDEDNGDHVMVD-GMGRSPDEQDLDLDEFEYSLNKMSITPKNSFSCRLDGELRQPMKM 291

Query: 241 PSRIRPSMSPESL 300
           PSRIRPS SPESL
Sbjct: 292 PSRIRPSTSPESL 292

Query: 301 360
           
Sbjct: 352 292

Query: 361 420
           
Sbjct: 412 292

Query: 421 480
           
Sbjct: 472 292

Query: 481 540
           
Sbjct: 532 292

Query: 541 600
           
Sbjct: 592 292

Query: 601 660
           
Sbjct: 652 292

Query: 661 720
           
Sbjct: 712 292

Query: 721 727
           
Sbjct: 772 292

BLAST of MU47948 vs. TrEMBL
Match: A0A067FIX7_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0416052mg PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 4.0e-74
Identity = 153/253 (60.47%), Postives = 179/253 (70.75%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FL+   + ++LKRLVDWCLEY      + NPKAH+VFYSGCQAIMYVLCFRMRSI+++PR
Sbjct: 52  FLSPCFIVSLLKRLVDWCLEYCNIPGGNINPKAHRVFYSGCQAIMYVLCFRMRSIMDVPR 111

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
           LKSQLLLMP+  +L H L+PLKVCLPS+V EFLQQ+K A LFT SETFIFN LL+SE SR
Sbjct: 112 LKSQLLLMPLETVLKHNLNPLKVCLPSVVSEFLQQSKAARLFTVSETFIFNDLLESELSR 171

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYXXXXXXXXXXXXXXXXXXVF 180
            FGGLERLDMFFPFDPCLLKK D ++RP+F+YWSMV+  Y                    
Sbjct: 172 DFGGLERLDMFFPFDPCLLKKSDSFIRPNFIYWSMVKTAYHGDEEDNSD----------- 231

Query: 181 PDIIEEN---LMDDVAMARSYDDQDFDLDS---GLNNMSITPRNSLQYRHDF-----VKM 240
            D+ E+N   +M D  M RS D+QD DLD     LN MSITP+NS   R D      +KM
Sbjct: 232 EDVDEDNGDHVMVD-GMGRSPDEQDLDLDEFEYSLNKMSITPKNSFSCRLDGELRQPMKM 291

Query: 241 PSRIRPSMSPESL 300
           PSRIRPS SPESL
Sbjct: 292 PSRIRPSTSPESL 292

Query: 301 360
           
Sbjct: 352 292

Query: 361 420
           
Sbjct: 412 292

Query: 421 480
           
Sbjct: 472 292

Query: 481 540
           
Sbjct: 532 292

Query: 541 600
           
Sbjct: 592 292

Query: 601 660
           
Sbjct: 652 292

Query: 661 720
           
Sbjct: 712 292

Query: 721 727
           
Sbjct: 772 292

BLAST of MU47948 vs. TrEMBL
Match: A0A061DG04_THECC (Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_000027 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 6.8e-74
Identity = 146/252 (57.94%), Postives = 185/252 (73.41%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FL+ SL++++LKRLVDWCLEYG+T + D NP AH+VFYSGCQAIMYVLCFRM+  +++PR
Sbjct: 381 FLSASLISSMLKRLVDWCLEYGKTPDGDINPNAHRVFYSGCQAIMYVLCFRMKVFMDVPR 440

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
           LK QLL MP+  +L H+L+PLKVCLPS+VEEFL+Q+K A LFT S+TF+F+GLL+SE SR
Sbjct: 441 LKMQLL-MPMEQILKHKLNPLKVCLPSVVEEFLRQSKAACLFTVSKTFVFDGLLESELSR 500

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYXXXXXXXXXXXXXXXXXXVF 180
           +FGGLERLD FFPFDPCLLK+CD ++RP FV+WSMV+PTY                  + 
Sbjct: 501 AFGGLERLDTFFPFDPCLLKRCDSFIRPMFVFWSMVKPTY--DDAYDDDNDDGSSDDELI 560

Query: 181 PDIIEEN--LMDDVAMARSYDDQDFDLDS---GLNNMSITPRNSLQYR-----HDFVKMP 240
            D + EN  +MDD  +ARS+D+Q  DLD     L  MSITP+N   Y+      +  +MP
Sbjct: 561 QDFVNENEDIMDD-GVARSFDEQGLDLDEFDCALKKMSITPKNGFSYKFGGGFQEPTRMP 620

Query: 241 SRIRPSMSPESL 300
            RIRPS SPESL
Sbjct: 621 CRIRPSTSPESL 628

Query: 301 360
           
Sbjct: 681 628

Query: 361 420
           
Sbjct: 741 628

Query: 421 480
           
Sbjct: 801 628

Query: 481 540
           
Sbjct: 861 628

Query: 541 600
           
Sbjct: 921 628

Query: 601 660
           
Sbjct: 981 628

Query: 661 720
           
Sbjct: 1041 628

Query: 721 727
           
Sbjct: 1101 628

BLAST of MU47948 vs. TAIR10
Match: AT2G34750.1 (AT2G34750.1 RNA polymerase I specific transcription initiation factor RRN3 protein)

HSP 1 Score: 238.0 bits (606), Expect = 8.2e-63
Identity = 126/245 (51.43%), Postives = 161/245 (65.71%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FL  S V ++LKRL+D C+ Y  T N D  P+AH++F+SGCQAIMYVLCFRMRSIL++PR
Sbjct: 389 FLPVSFVASMLKRLIDECVGYCRTCNDDTRPEAHQIFFSGCQAIMYVLCFRMRSILDVPR 448

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
            +SQL   P+  +L H+L+PL VCLPS+V EFL+QAK   LF  S++FIF+ LL+SE SR
Sbjct: 449 FRSQLT--PLESILMHKLNPLMVCLPSVVAEFLRQAKEGGLFIVSDSFIFDDLLESELSR 508

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYXXXXXXXXXXXXXXXXXXVF 180
           +FGG ERLD FFPFDPCLLK  + ++ P+F+YWSMV+ TY                    
Sbjct: 509 AFGGFERLDTFFPFDPCLLKSSNSFISPNFIYWSMVKATYDEDDDDND------------ 568

Query: 181 PDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPRNSLQ---YRHDFVKMPSRIRPSM 240
            ++I     D      S +D + DLD  LN MSITP++S +    R   ++MPSRIRPS 
Sbjct: 569 AEVIVNGDED------SDEDDEADLDYALNKMSITPKHSFKNKMERDRLLRMPSRIRPST 613

Query: 241 SPESL 300
           SPESL
Sbjct: 629 SPESL 613

Query: 301 360
           
Sbjct: 689 613

Query: 361 420
           
Sbjct: 749 613

Query: 421 480
           
Sbjct: 809 613

Query: 481 540
           
Sbjct: 869 613

Query: 541 600
           
Sbjct: 929 613

Query: 601 660
           
Sbjct: 989 613

Query: 661 720
           
Sbjct: 1049 613

Query: 721 727
           
Sbjct: 1109 613

BLAST of MU47948 vs. TAIR10
Match: AT1G30590.1 (AT1G30590.1 RNA polymerase I specific transcription initiation factor RRN3 protein)

HSP 1 Score: 231.9 bits (590), Expect = 5.9e-61
Identity = 123/240 (51.25%), Postives = 157/240 (65.42%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FL  S V ++LKRLVD C EY  T N D  P+AH+VFYSGCQAI+YVLCFRMRSI+EIPR
Sbjct: 376 FLPASFVASMLKRLVDECAEYCGTCNDDVKPEAHQVFYSGCQAILYVLCFRMRSIVEIPR 435

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
            +SQ     +  +L+H+L+PL VCLPS+V EFL+QAK   LF  SE+FIF+ L +SE SR
Sbjct: 436 FQSQF--RSLESILSHKLNPLLVCLPSVVSEFLKQAKAGGLFIVSESFIFDDLHESELSR 495

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYXXXXXXXXXXXXXXXXXXVF 180
           +FGG ERLD FFPFDPCLLK    Y+ P+F +WSMV+ TY                    
Sbjct: 496 AFGGFERLDTFFPFDPCLLKMSSSYISPNFNFWSMVKTTYGEDGD--------------- 555

Query: 181 PDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPRNS-LQYRHDFVKMPSRIRPSMSP 240
            ++ +E +++  A +    D D +LDS +N MS TP++S ++     +KMPSRIRPS SP
Sbjct: 556 EELCDEVIVNGDADSAEEPDDDVELDSEMNTMSTTPKHSFMRETERLLKMPSRIRPSTSP 598

Query: 241 300
           
Sbjct: 616 598

Query: 301 360
           
Sbjct: 676 598

Query: 361 420
           
Sbjct: 736 598

Query: 421 480
           
Sbjct: 796 598

Query: 481 540
           
Sbjct: 856 598

Query: 541 600
           
Sbjct: 916 598

Query: 601 660
           
Sbjct: 976 598

Query: 661 718
           
Sbjct: 1036 598

BLAST of MU47948 vs. TAIR10
Match: AT2G39240.1 (AT2G39240.1 RNA polymerase I specific transcription initiation factor RRN3 protein)

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-48
Identity = 115/244 (47.13%), Postives = 146/244 (59.84%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FL+ S V ++LKRLVD C +Y  T N D  P+ H+VFYSGCQAI+YVLCFRMRSILE+P 
Sbjct: 361 FLSASFVASMLKRLVDECADYCRTCNDDARPEVHQVFYSGCQAILYVLCFRMRSILEVPH 420

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
            +SQ  L P+  +L+H+L PL+VCL S+V EFL QAK   LF  S+ FIF+ L +SE SR
Sbjct: 421 FQSQ--LTPLESVLSHKLDPLRVCLSSVVSEFLIQAKACGLFIVSDAFIFDDLSESELSR 480

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYXXXXXXXXXXXXXXXXXXVF 180
           + GG      FFPF P LL+K +  + PHF+  S V+ TY                  V+
Sbjct: 481 ALGG------FFPF-PWLLEKSNSLISPHFIKRSEVKKTY------------EQAEVTVY 540

Query: 181 PDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPRNSLQYRHD-FVKMPSRIRPSMSP 240
            D   E   DD          D D D+ +N MSITP++S+ +  +  +KMPSRI PS SP
Sbjct: 541 GDTDNEEDSDD----------DVDPDNEMNKMSITPKHSVMHETERLLKMPSRISPSTSP 573

Query: 241 -ESL 300
            ESL
Sbjct: 601 RESL 573

Query: 301 360
           
Sbjct: 661 573

Query: 361 420
           
Sbjct: 721 573

Query: 421 480
           
Sbjct: 781 573

Query: 481 540
           
Sbjct: 841 573

Query: 541 600
           
Sbjct: 901 573

Query: 601 660
           
Sbjct: 961 573

Query: 661 720
           
Sbjct: 1021 573

Query: 721 727
           
Sbjct: 1081 573

BLAST of MU47948 vs. NCBI nr
Match: gi|659075242|ref|XP_008438040.1| (PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 1.3e-123
Identity = 223/242 (92.15%), Postives = 224/242 (92.56%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR
Sbjct: 384 FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 443

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
           LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLL+SEYSR
Sbjct: 444 LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSR 503

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYXXXXXXXXXXXXXXXXXXVF 180
           SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTY                  VF
Sbjct: 504 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYAEEEEQEEDGGSSDEDAEVF 563

Query: 181 PDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPRNSLQYRHDFVKMPSRIRPSMSPE 240
           PDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPRNSLQYRHDFVKMPSRIRPSMSPE
Sbjct: 564 PDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPRNSLQYRHDFVKMPSRIRPSMSPE 623

Query: 241 SL 300
           SL
Sbjct: 624 SL 625

Query: 301 360
           
Sbjct: 684 625

Query: 361 420
           
Sbjct: 744 625

Query: 421 480
           
Sbjct: 804 625

Query: 481 540
           
Sbjct: 864 625

Query: 541 600
           
Sbjct: 924 625

Query: 601 660
           
Sbjct: 984 625

Query: 661 720
           
Sbjct: 1044 625

Query: 721 727
           
Sbjct: 1104 625

BLAST of MU47948 vs. NCBI nr
Match: gi|449432152|ref|XP_004133864.1| (PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 5.6e-114
Identity = 209/241 (86.72%), Postives = 216/241 (89.63%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FLTTSLVTTILKRLVDWCLEYG+TLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR
Sbjct: 384 FLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 443

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
           LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL+QAKVANLFTPSE FIFNGLL+S+YSR
Sbjct: 444 LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSR 503

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTY-XXXXXXXXXXXXXXXXXXV 180
           SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTY                   +
Sbjct: 504 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYDEEEEEEEDDGGSSDEDAEI 563

Query: 181 FPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPRNSLQYRHDFVKMPSRIRPSMSP 240
           FPD I+ENLMDD AMA SYDDQDFDLDSGLN MSITPRNSLQYR DFV+MPSRIRPSMSP
Sbjct: 564 FPDRIDENLMDDEAMAISYDDQDFDLDSGLNKMSITPRNSLQYRCDFVQMPSRIRPSMSP 623

Query: 241 E 300
           E
Sbjct: 624 E 624

Query: 301 360
           
Sbjct: 684 624

Query: 361 420
           
Sbjct: 744 624

Query: 421 480
           
Sbjct: 804 624

Query: 481 540
           
Sbjct: 864 624

Query: 541 600
           
Sbjct: 924 624

Query: 601 660
           
Sbjct: 984 624

Query: 661 720
           
Sbjct: 1044 624

BLAST of MU47948 vs. NCBI nr
Match: gi|731387678|ref|XP_010649342.1| (PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Vitis vinifera])

HSP 1 Score: 299.3 bits (765), Expect = 8.5e-78
Identity = 157/248 (63.31%), Postives = 184/248 (74.19%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FLT S V  IL+RLV WCLEY +  + D NPKAH+VFYSGCQAIMYVLCFRMRS++ +P 
Sbjct: 385 FLTASFVANILERLVVWCLEYCKIHDGDINPKAHQVFYSGCQAIMYVLCFRMRSMMNVPH 444

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
           L+SQLLL+P+  +L H LSPLKVCLPSIVEEFL+QAK A LFT SETFIF+ LL+SE SR
Sbjct: 445 LRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSR 504

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYXXXXXXXXXXXXXXXXXXVF 180
           +FGG+ERLDMFFPFDPCLLKKCDR++RP+FVYWSM+R TY                    
Sbjct: 505 AFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTYDDGEDSSDEEPAEDYEAS-H 564

Query: 181 PDIIEENLMDDVAMARSYDDQDFDLDS---GLNNMSITPRNSLQYRHD---FVKMPSRIR 240
           PD    ++M+D AMARSYD  D +LD     +N MSITP+NSL YR      V+MPSRIR
Sbjct: 565 PD----DVMNDDAMARSYDSHDLELDEFDHSMNKMSITPKNSLYYRFGDELKVQMPSRIR 624

Query: 241 PSMSPESL 300
           PS SPESL
Sbjct: 625 PSTSPESL 627

Query: 301 360
           
Sbjct: 685 627

Query: 361 420
           
Sbjct: 745 627

Query: 421 480
           
Sbjct: 805 627

Query: 481 540
           
Sbjct: 865 627

Query: 541 600
           
Sbjct: 925 627

Query: 601 660
           
Sbjct: 985 627

Query: 661 720
           
Sbjct: 1045 627

Query: 721 727
           
Sbjct: 1105 627

BLAST of MU47948 vs. NCBI nr
Match: gi|568859896|ref|XP_006483466.1| (PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Citrus sinensis])

HSP 1 Score: 290.8 bits (743), Expect = 3.0e-75
Identity = 156/253 (61.66%), Postives = 182/253 (71.94%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FL+   + ++LKRLVDWCLEY   L  D NPKAH+VFYSGCQAIMYVLCFRMRSI++IPR
Sbjct: 388 FLSPCFIVSLLKRLVDWCLEYCNILGGDINPKAHRVFYSGCQAIMYVLCFRMRSIMDIPR 447

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
           LKSQLLLMP+  +L H L+PLKVCLPS+V EFLQQ+K A LFT SETF+FN LL+SE SR
Sbjct: 448 LKSQLLLMPLETVLKHDLNPLKVCLPSVVSEFLQQSKAARLFTVSETFVFNDLLESELSR 507

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYXXXXXXXXXXXXXXXXXXVF 180
           +FGGLERLDMFFPFDPCLLKK D ++RP+FVYWSMV+  Y                    
Sbjct: 508 AFGGLERLDMFFPFDPCLLKKSDSFIRPNFVYWSMVKTAYHGDEEDNSD----------- 567

Query: 181 PDIIEEN---LMDDVAMARSYDDQDFDLDS---GLNNMSITPRNSLQYRHDF-----VKM 240
            D+ E+N   +M D  + RS D+QD DLD     LN MSITP+NS   R D      +KM
Sbjct: 568 EDVDEDNGDHVMVD-GVGRSPDEQDLDLDEFEYSLNKMSITPKNSFSCRLDGELRQPMKM 627

Query: 241 PSRIRPSMSPESL 300
           PSRIRPSMSPESL
Sbjct: 628 PSRIRPSMSPESL 628

Query: 301 360
           
Sbjct: 688 628

Query: 361 420
           
Sbjct: 748 628

Query: 421 480
           
Sbjct: 808 628

Query: 481 540
           
Sbjct: 868 628

Query: 541 600
           
Sbjct: 928 628

Query: 601 660
           
Sbjct: 988 628

Query: 661 720
           
Sbjct: 1048 628

Query: 721 727
           
Sbjct: 1108 628

BLAST of MU47948 vs. NCBI nr
Match: gi|641848589|gb|KDO67466.1| (hypothetical protein CISIN_1g0074032mg, partial [Citrus sinensis])

HSP 1 Score: 290.0 bits (741), Expect = 5.1e-75
Identity = 156/253 (61.66%), Postives = 181/253 (71.54%), Query Frame = 1

Query: 1   FLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPR 60
           FL+   + ++LKRLVDWCLEY   L  D NPKAH+VFYSGCQAIMYVLCFRMRSI++IPR
Sbjct: 52  FLSPCFIVSLLKRLVDWCLEYCNILGGDINPKAHRVFYSGCQAIMYVLCFRMRSIMDIPR 111

Query: 61  LKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLDSEYSR 120
           LKSQLLLMP+  +L H L+PLKVCLPS+V EFLQQ+K A LFT SETF+FN LL+SE SR
Sbjct: 112 LKSQLLLMPLETVLKHDLNPLKVCLPSVVSEFLQQSKAARLFTVSETFVFNDLLESELSR 171

Query: 121 SFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYXXXXXXXXXXXXXXXXXXVF 180
           +FGGLERLDMFFPFDPCLLKK D ++RP+FVYWSMV+  Y                    
Sbjct: 172 AFGGLERLDMFFPFDPCLLKKSDSFIRPNFVYWSMVKTAYHGDEEDNSD----------- 231

Query: 181 PDIIEEN---LMDDVAMARSYDDQDFDLDS---GLNNMSITPRNSLQYRHDF-----VKM 240
            D+ E+N   +M D  M RS D+QD DLD     LN MSITP+NS   R D      +KM
Sbjct: 232 EDVDEDNGDHVMVD-GMGRSPDEQDLDLDEFEYSLNKMSITPKNSFSCRLDGELRQPMKM 291

Query: 241 PSRIRPSMSPESL 300
           PSRIRPS SPESL
Sbjct: 292 PSRIRPSTSPESL 292

Query: 301 360
           
Sbjct: 352 292

Query: 361 420
           
Sbjct: 412 292

Query: 421 480
           
Sbjct: 472 292

Query: 481 540
           
Sbjct: 532 292

Query: 541 600
           
Sbjct: 592 292

Query: 601 660
           
Sbjct: 652 292

Query: 661 720
           
Sbjct: 712 292

Query: 721 727
           
Sbjct: 772 292

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RRN3_MOUSE1.2e-1030.36RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus G... [more]
RRN3_HUMAN4.4e-1030.36RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens G... [more]
RRN3_PONAB7.6e-1031.36RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii G... [more]
Match NameE-valueIdentityDescription
A0A0A0L7G6_CUCSA1.3e-11486.72Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122360 PE=4 SV=1[more]
F6I0C5_VITVI3.5e-7863.31Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01700 PE=4 SV=... [more]
A0A067FW78_CITSI1.6e-7561.66Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0074032mg PE=4 ... [more]
A0A067FIX7_CITSI4.0e-7460.47Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0416052mg PE=4 ... [more]
A0A061DG04_THECC6.8e-7457.94Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_000027... [more]
Match NameE-valueIdentityDescription
AT2G34750.18.2e-6351.43 RNA polymerase I specific transcription initiation factor RRN3 prote... [more]
AT1G30590.15.9e-6151.25 RNA polymerase I specific transcription initiation factor RRN3 prote... [more]
AT2G39240.11.1e-4847.13 RNA polymerase I specific transcription initiation factor RRN3 prote... [more]
Match NameE-valueIdentityDescription
gi|659075242|ref|XP_008438040.1|1.3e-12392.15PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucum... [more]
gi|449432152|ref|XP_004133864.1|5.6e-11486.72PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucum... [more]
gi|731387678|ref|XP_010649342.1|8.5e-7863.31PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Vitis... [more]
gi|568859896|ref|XP_006483466.1|3.0e-7561.66PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [... [more]
gi|641848589|gb|KDO67466.1|5.1e-7561.66hypothetical protein CISIN_1g0074032mg, partial [Citrus sinensis][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR007991RNA_pol_I_trans_ini_fac_RRN3

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C006107MELO3C006107gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
46D06F1046D06F10EST
CI45G12CI45G12EST
LA1YO17FM1LA1YO17FM1EST
TEa0014K19TEa0014K19EST


Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007991RNA polymerase I specific transcription initiation factor RRN3PANTHERPTHR12790TRANSCRIPTION INITIATION FACTOR IA RRN3coord: 1..242
score: 2.3
IPR007991RNA polymerase I specific transcription initiation factor RRN3PFAMPF05327RRN3coord: 1..157
score: 8.7
NoneNo IPR availablePANTHERPTHR12790:SF0RNA POLYMERASE I-SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3-RELATEDcoord: 1..242
score: 2.3