MU47620 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU47620
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Transmembrane and coiled-coil protein
Location	chr4 : 29631977 .. 29633021 (+)
Sequence length	1044

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AGAATTGGGAACTGGGAACGACATCTTTCCCAATTTCAACAATTGAGGAACTAACCAATTTTGATGGTAATTGATGAAAGTTGAGATATAATATATATTTTTTCATCACATCACTTAGATCCAAATCCAATTCCACAAAAATTCTCCCACTTTCCCCTCCGGGATTAACCCATTTTCTCTTCCGATTCCGGCGATGGCCACGATCCCCCTCTTCTCCTCCTTCCGATACTCCGACAGTCTCACTGTCCTCGGAATCTCCGTCTGCACCGCCGTCATTTGCGAAGCCATCTCATGGGTTCTAATCTATCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGACAGCTCTAAAATCACTGTAAAGAAATCCAAAACCAAGAAGATCGATCGCATCGAGACCAGTCTCAAGGAATCCAGCCGTGATCTCTCGCTCTTCAAGTTTAAATCCGGCGCCGTTGTTGCCCTTGTTCTGTTCGTCGTCTTTGGATTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGAGTCACCGAGGGTTACAGGGTGAGGATCCTACCGATTGCGCTATGGCGTTCTTGTACTTCCTCTGTTCTATTAGCATTAGGACCAATCTGCAGAAGTTCTTGGGATTCTCTCCGCCGAGAGGCGCCGGAGCTGGGTTGTTCCCGATGCCAGATCCTAAGACGAACTGATTTAGGTCAGGCTTGGATCAAATTAGTACTCTCTTTTCCCCCCACCTTCATTATGAATGAATTTTCGTACTGATGAAAACTTGGTTTGGGCTGATTAGGCTTACTTTTATTAGGGTTCTATATGTTCATTTTATAGTGAGTTCATCGGACTTAGTATAGCTATGGGTTCCACAAATTTGAGAGGGTCATTCTGGTTCAAATCTCTACTTGCATTCTTGATTAGATTTGGAAATAATACTATCTTTTTTGGGATCAATATAAGCTTTTGATCTTTG

Library


Library category	ESTs
melon 15d library	1
melon SFTP2 library	1
melon VFTP2 library	2
melon PS library	3
melon PSI library	1

Homology

[Close]

BLAST of MU47620 vs. Swiss-Prot
Match: TMCO1_BOVIN (Transmembrane and coiled-coil domain-containing protein 1 OS=Bos taurus GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-33
Identity = 78/187 (41.71%), Postives = 107/187 (57.22%), Query Frame = 2


Query: 218 SFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMXXXXXXXX 277
           S  ++D+L ++ ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE          
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 278 XXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGKVVAKLPFK 337
                     R E  LK ++RDLS+ + KS               NS+F+G+VVAKLPF 
Sbjct: 62  GRQQKKKIE-RQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 338 PFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 397
           P   +  +SHR L G+D TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

Query: 398 DPKTN*F 457
            P +  F
Sbjct: 182 PPPSGKF 187

Query: 458  517
           
Sbjct: 242  187

Query: 518  577
           
Sbjct: 302  187

Query: 578  637
           
Sbjct: 362  187

Query: 638  697
           
Sbjct: 422  187

Query: 698  757
           
Sbjct: 482  187

Query: 758  773
           
Sbjct: 542  187

[Close]

BLAST of MU47620 vs. Swiss-Prot
Match: TMCO1_HUMAN (Transmembrane and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=TMCO1 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-33
Identity = 78/187 (41.71%), Postives = 107/187 (57.22%), Query Frame = 2


Query: 218 SFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMXXXXXXXX 277
           S  ++D+L ++ ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE          
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 278 XXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGKVVAKLPFK 337
                     R E  LK ++RDLS+ + KS               NS+F+G+VVAKLPF 
Sbjct: 62  GRQQKKKIE-RQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 338 PFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 397
           P   +  +SHR L G+D TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

Query: 398 DPKTN*F 457
            P +  F
Sbjct: 182 PPPSGKF 187

Query: 458  517
           
Sbjct: 242  187

Query: 518  577
           
Sbjct: 302  187

Query: 578  637
           
Sbjct: 362  187

Query: 638  697
           
Sbjct: 422  187

Query: 698  757
           
Sbjct: 482  187

Query: 758  773
           
Sbjct: 542  187

[Close]

BLAST of MU47620 vs. Swiss-Prot
Match: TMCO1_MOUSE (Transmembrane and coiled-coil domain-containing protein 1 OS=Mus musculus GN=Tmco1 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-33
Identity = 78/187 (41.71%), Postives = 107/187 (57.22%), Query Frame = 2


Query: 218 SFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMXXXXXXXX 277
           S  ++D+L ++ ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE          
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 278 XXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGKVVAKLPFK 337
                     R E  LK ++RDLS+ + KS               NS+F+G+VVAKLPF 
Sbjct: 62  GRQQKKKIE-RQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 338 PFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 397
           P   +  +SHR L G+D TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

Query: 398 DPKTN*F 457
            P +  F
Sbjct: 182 PPPSGKF 187

Query: 458  517
           
Sbjct: 242  187

Query: 518  577
           
Sbjct: 302  187

Query: 578  637
           
Sbjct: 362  187

Query: 638  697
           
Sbjct: 422  187

Query: 698  757
           
Sbjct: 482  187

Query: 758  773
           
Sbjct: 542  187

[Close]

BLAST of MU47620 vs. Swiss-Prot
Match: TMCO1_PIG (Transmembrane and coiled-coil domains protein 1 OS=Sus scrofa GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-33
Identity = 78/187 (41.71%), Postives = 107/187 (57.22%), Query Frame = 2


Query: 218 SFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMXXXXXXXX 277
           S  ++D+L ++ ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE          
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 278 XXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGKVVAKLPFK 337
                     R E  LK ++RDLS+ + KS               NS+F+G+VVAKLPF 
Sbjct: 62  GRQQKKKIE-RQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 338 PFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 397
           P   +  +SHR L G+D TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

Query: 398 DPKTN*F 457
            P +  F
Sbjct: 182 PPPSGKF 187

Query: 458  517
           
Sbjct: 242  187

Query: 518  577
           
Sbjct: 302  187

Query: 578  637
           
Sbjct: 362  187

Query: 638  697
           
Sbjct: 422  187

Query: 698  757
           
Sbjct: 482  187

Query: 758  773
           
Sbjct: 542  187

[Close]

BLAST of MU47620 vs. Swiss-Prot
Match: TMCO1_PONAB (Transmembrane and coiled-coil domain-containing protein 1 OS=Pongo abelii GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-33
Identity = 78/187 (41.71%), Postives = 107/187 (57.22%), Query Frame = 2


Query: 218 SFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMXXXXXXXX 277
           S  ++D+L ++ ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE          
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 278 XXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGKVVAKLPFK 337
                     R E  LK ++RDLS+ + KS               NS+F+G+VVAKLPF 
Sbjct: 62  GRQQKKKIE-RQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 338 PFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 397
           P   +  +SHR L G+D TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

Query: 398 DPKTN*F 457
            P +  F
Sbjct: 182 PPPSGKF 187

Query: 458  517
           
Sbjct: 242  187

Query: 518  577
           
Sbjct: 302  187

Query: 578  637
           
Sbjct: 362  187

Query: 638  697
           
Sbjct: 422  187

Query: 698  757
           
Sbjct: 482  187

Query: 758  773
           
Sbjct: 542  187

[Close]

BLAST of MU47620 vs. TrEMBL
Match: A0A0A0LGX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G799650 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 4.7e-78
Identity = 155/191 (81.15%), Postives = 158/191 (82.72%), Query Frame = 2


Query: 194 MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 253
           MATIPLFSSFRYSDSL+V+GISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 254 XXXXXXXXXXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGK 313
                             RIETSLKESSRDLSLFKFKS               NSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 314 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 373
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 374 GLFPMPDPKTN 433
           GLFPMPDPKTN
Sbjct: 181 GLFPMPDPKTN 191

Query: 434  493
           
Sbjct: 241  191

Query: 494  553
           
Sbjct: 301  191

Query: 554  613
           
Sbjct: 361  191

Query: 614  673
           
Sbjct: 421  191

Query: 674  733
           
Sbjct: 481  191

Query: 734  767
           
Sbjct: 541  191

[Close]

BLAST of MU47620 vs. TrEMBL
Match: M5VQU7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010023mg PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 6.6e-72
Identity = 146/208 (70.19%), Postives = 155/208 (74.52%), Query Frame = 2


Query: 143 SPTFPSGINPFSLPIPAMATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSY 202
           SP FPS  +        MAT    SS +YSD LTV+GIS CTA++CEAISWVLIYRTNSY
Sbjct: 66  SPNFPSSSSS------PMATTSFLSSLKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSY 125

Query: 203 KTLRSSIDKAAKKLETMXXXXXXXXXXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXX 262
           K+LRSSIDKAAKKLETM                  R+ETSLKESSRDLSLFKFKS     
Sbjct: 126 KSLRSSIDKAAKKLETMKTDPAIKIAKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVA 185

Query: 263 XXXXXXXXXXNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIR 322
                     NSLFEGKVVAKLPFKPFGLVMKMSHRGLQGED TDC+MAFLYFLCSISIR
Sbjct: 186 LVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGEDSTDCSMAFLYFLCSISIR 245

Query: 323 TNLQKFLGFSPPRGAGAGLFPMPDPKTN 382
           TNLQKFLGFSPPRGA +GLFPMPDPKTN
Sbjct: 246 TNLQKFLGFSPPRGASSGLFPMPDPKTN 267

Query: 383  442
           
Sbjct: 306  267

Query: 443  502
           
Sbjct: 366  267

Query: 503  562
           
Sbjct: 426  267

Query: 563  622
           
Sbjct: 486  267

Query: 623  682
           
Sbjct: 546  267

Query: 683  742
           
Sbjct: 606  267

Query: 743  767
           
Sbjct: 666  267

[Close]

BLAST of MU47620 vs. TrEMBL
Match: B7FGM9_MEDTR (Transmembrane and coiled-coil protein OS=Medicago truncatula GN=MTR_7g085050 PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.6e-70
Identity = 138/185 (74.59%), Postives = 147/185 (79.46%), Query Frame = 2


Query: 212 FSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMXXXXXX 271
           FS F+YSD LTV+GIS CTA++CEAISWVLIYRTNSYK LRSSIDKA+KKLETM      
Sbjct: 5   FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNK 64

Query: 272 XXXXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGKVVAKLP 331
                       R+ETSLKESSRDLSLFKFKS               NSLFEGKVVAKLP
Sbjct: 65  INIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLP 124

Query: 332 FKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMP 391
           FKPFGLVMKMSHRGLQG DPTDC+MAFLYFLCSISIRTNLQKFLGF+PPRGAGAGLFPMP
Sbjct: 125 FKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGAGAGLFPMP 184

Query: 392 DPKTN 451
           DPKT+
Sbjct: 185 DPKTS 189

Query: 452  511
           
Sbjct: 245  189

Query: 512  571
           
Sbjct: 305  189

Query: 572  631
           
Sbjct: 365  189

Query: 632  691
           
Sbjct: 425  189

Query: 692  751
           
Sbjct: 485  189

Query: 752  767
           
Sbjct: 545  189

[Close]

BLAST of MU47620 vs. TrEMBL
Match: W9SNZ3_9ROSA (Transmembrane and coiled-coil domains protein 1 OS=Morus notabilis GN=L484_000651 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.7e-70
Identity = 139/191 (72.77%), Postives = 150/191 (78.53%), Query Frame = 2


Query: 194 MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 253
           MA   + +S +YSDSL V+GIS+CTAV+CEAISW+LIYRTNSYK+LRSSIDKAAKKLETM
Sbjct: 1   MALPSMLASLKYSDSLRVVGISICTAVVCEAISWLLIYRTNSYKSLRSSIDKAAKKLETM 60

Query: 254 XXXXXXXXXXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGK 313
                             R+ETSLKESSRDLSLFKFKS               NSLFEGK
Sbjct: 61  KTESAKIAAKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 314 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 373
           VVAKLPFKPFGLVMKMSHRGLQG DPTDC+MAFLYFLCSISIRTNLQKFLGFSPPRGA A
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGASA 180

Query: 374 GLFPMPDPKTN 433
           GLFPMPDPKT+
Sbjct: 181 GLFPMPDPKTS 191

Query: 434  493
           
Sbjct: 241  191

Query: 494  553
           
Sbjct: 301  191

Query: 554  613
           
Sbjct: 361  191

Query: 614  673
           
Sbjct: 421  191

Query: 674  733
           
Sbjct: 481  191

Query: 734  767
           
Sbjct: 541  191

[Close]

BLAST of MU47620 vs. TrEMBL
Match: I3S6A1_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.7e-70
Identity = 137/185 (74.05%), Postives = 146/185 (78.92%), Query Frame = 2


Query: 212 FSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMXXXXXX 271
           FS F+YSD LTV+GIS CTA++CEAISWVLIYRTNSYK LRSSIDKA+KKLETM      
Sbjct: 5   FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNK 64

Query: 272 XXXXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGKVVAKLP 331
                       R+ETSLKESSRDLSLFKFKS               NSLFEGKVVAKLP
Sbjct: 65  INIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLP 124

Query: 332 FKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMP 391
           FKPFGLVMKMSHRGLQG DPTDC+MAFLYFLCSISIRTNLQKFLGF+PPRGAGAG FPMP
Sbjct: 125 FKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGAGAGFFPMP 184

Query: 392 DPKTN 451
           DPKT+
Sbjct: 185 DPKTS 189

Query: 452  511
           
Sbjct: 245  189

Query: 512  571
           
Sbjct: 305  189

Query: 572  631
           
Sbjct: 365  189

Query: 632  691
           
Sbjct: 425  189

Query: 692  751
           
Sbjct: 485  189

Query: 752  767
           
Sbjct: 545  189

[Close]

BLAST of MU47620 vs. TAIR10
Match: AT3G12030.1 (AT3G12030.1 Protein of unknown function DUF106, transmembrane)

HSP 1 Score: 251.9 bits (642), Expect = 5.7e-67
Identity = 131/193 (67.88%), Postives = 144/193 (74.61%), Query Frame = 2


Query: 200 TIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMXX 259
           TIPLF+SF+Y+DSLTV+GIS CTA++CEAISW+LIYRT+SYK+L+ SIDKA KKLETM  
Sbjct: 4   TIPLFASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKYSIDKATKKLETMKT 63

Query: 260 XXXXXXXXXXXXXXXX--RIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGK 319
                             R+ETSLKESSRDLSLFKFKS               NSLFEGK
Sbjct: 64  ENPSSKLSIKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 123

Query: 320 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA-- 379
           VVAKLPF P  +V KMSHRGL+G+DPTDC+MAFLY LCSISIRTNLQKFLGFSPPRGA  
Sbjct: 124 VVAKLPFHPITIVKKMSHRGLKGDDPTDCSMAFLYLLCSISIRTNLQKFLGFSPPRGAAG 183

Query: 380 GAGLFPMPDPKTN 439
             GLFPMPDPKTN
Sbjct: 184 AGGLFPMPDPKTN 196

Query: 440  499
           
Sbjct: 244  196

Query: 500  559
           
Sbjct: 304  196

Query: 560  619
           
Sbjct: 364  196

Query: 620  679
           
Sbjct: 424  196

Query: 680  739
           
Sbjct: 484  196

Query: 740  767
           
Sbjct: 544  196

[Close]

BLAST of MU47620 vs. TAIR10
Match: AT5G06660.1 (AT5G06660.1 Protein of unknown function DUF106, transmembrane)

HSP 1 Score: 248.8 bits (634), Expect = 4.8e-66
Identity = 132/196 (67.35%), Postives = 147/196 (75.00%), Query Frame = 2


Query: 194 MAT-IPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLET 253
           MAT IPLF+SF+Y+DSLTV+GIS CTA++CEAISW+LIYRT+SYK+L+SSIDKA+KKLET
Sbjct: 1   MATAIPLFASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLET 60

Query: 254 MXXXXXXXXXXXXXXXXXX--RIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLF 313
           M                    R+E+SLKESSRDLSLFKFKS               NSLF
Sbjct: 61  MKTDNPSSKLTNKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF 120

Query: 314 EGKVVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRG 373
           EGKVVAKLPF P  +V KMSHRGL+G+D TDC+MAFLY LCSISIRTNLQKFLGFSPPRG
Sbjct: 121 EGKVVAKLPFHPITIVRKMSHRGLKGDDSTDCSMAFLYLLCSISIRTNLQKFLGFSPPRG 180

Query: 374 A--GAGLFPMPDPKTN 433
           A    GLFPMPDPKTN
Sbjct: 181 AAGAGGLFPMPDPKTN 196

Query: 434  493
           
Sbjct: 241  196

Query: 494  553
           
Sbjct: 301  196

Query: 554  613
           
Sbjct: 361  196

Query: 614  673
           
Sbjct: 421  196

Query: 674  733
           
Sbjct: 481  196

Query: 734  767
           
Sbjct: 541  196

[Close]

BLAST of MU47620 vs. NCBI nr
Match: gi|659084702|ref|XP_008443026.1| (PREDICTED: transmembrane and coiled-coil domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 1.6e-79
Identity = 158/191 (82.72%), Postives = 158/191 (82.72%), Query Frame = 2


Query: 194 MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 253
           MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 254 XXXXXXXXXXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGK 313
                             RIETSLKESSRDLSLFKFKS               NSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 314 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 373
           VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 374 GLFPMPDPKTN 433
           GLFPMPDPKTN
Sbjct: 181 GLFPMPDPKTN 191

Query: 434  493
           
Sbjct: 241  191

Query: 494  553
           
Sbjct: 301  191

Query: 554  613
           
Sbjct: 361  191

Query: 614  673
           
Sbjct: 421  191

Query: 674  733
           
Sbjct: 481  191

Query: 734  767
           
Sbjct: 541  191

[Close]

BLAST of MU47620 vs. NCBI nr
Match: gi|449437555|ref|XP_004136557.1| (PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 2.3e-78
Identity = 155/191 (81.15%), Postives = 158/191 (82.72%), Query Frame = 2


Query: 194 MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 253
           MATIPLFSSFRYSDSL+V+GISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 254 XXXXXXXXXXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGK 313
                             RIETSLKESSRDLSLFKFKS               NSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 314 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 373
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 374 GLFPMPDPKTN 433
           GLFPMPDPKTN
Sbjct: 181 GLFPMPDPKTN 191

Query: 434  493
           
Sbjct: 241  191

Query: 494  553
           
Sbjct: 301  191

Query: 554  613
           
Sbjct: 361  191

Query: 614  673
           
Sbjct: 421  191

Query: 674  733
           
Sbjct: 481  191

Query: 734  767
           
Sbjct: 541  191

[Close]

BLAST of MU47620 vs. NCBI nr
Match: gi|595806467|ref|XP_007202450.1| (hypothetical protein PRUPE_ppa010023mg [Prunus persica])

HSP 1 Score: 280.4 bits (716), Expect = 4.2e-72
Identity = 146/208 (70.19%), Postives = 155/208 (74.52%), Query Frame = 2


Query: 143 SPTFPSGINPFSLPIPAMATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSY 202
           SP FPS  +        MAT    SS +YSD LTV+GIS CTA++CEAISWVLIYRTNSY
Sbjct: 66  SPNFPSSSSS------PMATTSFLSSLKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSY 125

Query: 203 KTLRSSIDKAAKKLETMXXXXXXXXXXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXX 262
           K+LRSSIDKAAKKLETM                  R+ETSLKESSRDLSLFKFKS     
Sbjct: 126 KSLRSSIDKAAKKLETMKTDPAIKIAKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVA 185

Query: 263 XXXXXXXXXXNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIR 322
                     NSLFEGKVVAKLPFKPFGLVMKMSHRGLQGED TDC+MAFLYFLCSISIR
Sbjct: 186 LVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGEDSTDCSMAFLYFLCSISIR 245

Query: 323 TNLQKFLGFSPPRGAGAGLFPMPDPKTN 382
           TNLQKFLGFSPPRGA +GLFPMPDPKTN
Sbjct: 246 TNLQKFLGFSPPRGASSGLFPMPDPKTN 267

Query: 383  442
           
Sbjct: 306  267

Query: 443  502
           
Sbjct: 366  267

Query: 503  562
           
Sbjct: 426  267

Query: 563  622
           
Sbjct: 486  267

Query: 623  682
           
Sbjct: 546  267

Query: 683  742
           
Sbjct: 606  267

Query: 743  767
           
Sbjct: 666  267

[Close]

BLAST of MU47620 vs. NCBI nr
Match: gi|645272006|ref|XP_008241186.1| (PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Prunus mume])

HSP 1 Score: 277.7 bits (709), Expect = 2.7e-71
Identity = 141/191 (73.82%), Postives = 149/191 (78.01%), Query Frame = 2


Query: 194 MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 253
           MAT    SS +YSD LTV+GIS CTA++CEAISWVLIYRTNSYK+LRSSIDKAAKKLETM
Sbjct: 1   MATTSFLSSLKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKSLRSSIDKAAKKLETM 60

Query: 254 XXXXXXXXXXXXXXXXXXRIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEGK 313
                             R+ETSLKESSRDLSLFKFKS               NSLFEGK
Sbjct: 61  KTDPAIKIAKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 314 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 373
           VVAKLPFKPFGLVMKMSHRGLQGED TDC+MAFLYFLCSISIRTNLQKFLGFSPPRGA +
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGEDSTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGASS 180

Query: 374 GLFPMPDPKTN 433
           GLFPMPDPKTN
Sbjct: 181 GLFPMPDPKTN 191

Query: 434  493
           
Sbjct: 241  191

Query: 494  553
           
Sbjct: 301  191

Query: 554  613
           
Sbjct: 361  191

Query: 614  673
           
Sbjct: 421  191

Query: 674  733
           
Sbjct: 481  191

Query: 734  767
           
Sbjct: 541  191

[Close]

BLAST of MU47620 vs. NCBI nr
Match: gi|470135071|ref|XP_004303354.1| (PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 277.7 bits (709), Expect = 2.7e-71
Identity = 144/192 (75.00%), Postives = 151/192 (78.65%), Query Frame = 2


Query: 194 MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 253
           MAT    SS +YSDSLTV+GIS+CTAVICEAISWVLIYRTNSYK+LRSSIDKAAKKLETM
Sbjct: 1   MATPSFLSSLKYSDSLTVVGISICTAVICEAISWVLIYRTNSYKSLRSSIDKAAKKLETM 60

Query: 254 XXXXXXXXXXXXXXXXXX-RIETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLFEG 313
                              R+ETSLKESSRDLSLFKFKS               NSLFEG
Sbjct: 61  KTESTTAKITKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVAVVLFVVFGLLNSLFEG 120

Query: 314 KVVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG 373
           K VAKLPFKPFGLVMKMSHRGLQG+DPTDC+MAFLYFLCSISIRTNLQKFLGFSPPRGA 
Sbjct: 121 KAVAKLPFKPFGLVMKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAS 180

Query: 374 AGLFPMPDPKTN 433
           AGLFPMPDPKTN
Sbjct: 181 AGLFPMPDPKTN 192

Query: 434  493
           
Sbjct: 241  192

Query: 494  553
           
Sbjct: 301  192

Query: 554  613
           
Sbjct: 361  192

Query: 614  673
           
Sbjct: 421  192

Query: 674  733
           
Sbjct: 481  192

Query: 734  767
           
Sbjct: 541  192

The following BLAST results are available for this feature:

BLAST of MU47620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TMCO1_BOVIN	1.7e-33	41.71	Transmembrane and coiled-coil domain-containing protein 1 OS=Bos taurus GN=TMCO1...	[more]
TMCO1_HUMAN	1.7e-33	41.71	Transmembrane and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=TMC...	[more]
TMCO1_MOUSE	1.7e-33	41.71	Transmembrane and coiled-coil domain-containing protein 1 OS=Mus musculus GN=Tmc...	[more]
TMCO1_PIG	1.7e-33	41.71	Transmembrane and coiled-coil domains protein 1 OS=Sus scrofa GN=TMCO1 PE=2 SV=1	[more]
TMCO1_PONAB	1.7e-33	41.71	Transmembrane and coiled-coil domain-containing protein 1 OS=Pongo abelii GN=TMC...	[more]

BLAST of MU47620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGX0_CUCSA	4.7e-78	81.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G799650 PE=4 SV=1	[more]
M5VQU7_PRUPE	6.6e-72	70.19	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010023mg PE=4 SV=1	[more]
B7FGM9_MEDTR	1.6e-70	74.59	Transmembrane and coiled-coil protein OS=Medicago truncatula GN=MTR_7g085050 PE=...	[more]
W9SNZ3_9ROSA	4.7e-70	72.77	Transmembrane and coiled-coil domains protein 1 OS=Morus notabilis GN=L484_00065...	[more]
I3S6A1_MEDTR	4.7e-70	74.05	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]

BLAST of MU47620 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12030.1	5.7e-67	67.88	Protein of unknown function DUF106, transmembrane	[more]
AT5G06660.1	4.8e-66	67.35	Protein of unknown function DUF106, transmembrane	[more]

BLAST of MU47620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659084702\|ref\|XP_008443026.1\|	1.6e-79	82.72	PREDICTED: transmembrane and coiled-coil domain-containing protein 1-like [Cucum...	[more]
gi\|449437555\|ref\|XP_004136557.1\|	2.3e-78	81.15	PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Cucumis sa...	[more]
gi\|595806467\|ref\|XP_007202450.1\|	4.2e-72	70.19	hypothetical protein PRUPE_ppa010023mg [Prunus persica]	[more]
gi\|645272006\|ref\|XP_008241186.1\|	2.7e-71	73.82	PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Prunus mum...	[more]
gi\|470135071\|ref\|XP_004303354.1\|	2.7e-71	75.00	PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Fragaria v...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR002809	EMC3/TMCO1
IPR008559	TMCO1

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C009607	MELO3C009607	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
15D01C08	15D01C08	EST
AA2YO08FM1	AA2YO08FM1	EST
HA7YL08FM1	HA7YL08FM1	EST
HA7YL08RM1	HA7YL08RM1	EST
PS20B11	PS20B11	EST
PS21E04	PS21E04	EST
PS41A04	PS41A04	EST
PSI14D01	PSI14D01	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002809	Protein of unknown function DUF106, transmembrane	PFAM	PF01956	DUF106	coord: 16..173 score: 3.0
IPR002809	Protein of unknown function DUF106, transmembrane	SMART	SM01415	DUF106_2	coord: 14..174 score: 1.0
IPR008559	Uncharacterised conserved protein UCP023322, transmembrane eukaryotic	PIR	PIRSF023322	UCP023322_TM_coiled-coil	coord: 5..191 score: 8.1
IPR008559	Uncharacterised conserved protein UCP023322, transmembrane eukaryotic	PANTHER	PTHR20917	PNAS-RELATED	coord: 1..191 score: 7.7E
None	No IPR available	unknown	Coil	Coil	coord: 43..63 scor