MU45223 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU45223
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAldose 1-epimerase
Locationchr5 : 26914588 .. 26916673 (-)
Sequence length873
The following sequences are available for this feature:

transcribed_cluster sequence

GGACCAAACCCTAGGGTTTACTCTAACCGGACCACTAAACCCACCTTTTTTTTTCTTCTCTCTCTCAATTTTCCAGAAAAACCATTCGCTTTCTCCCCATCTTCTTCTTCTTCTTCTTCTTCTTCCAGCTCCCGCTCTCTTTCTGCAACTTCCCTTTTTCCTTTCTTTTCGTTTTTTCTTCACTTTCACTTTCTTTTTCCGCTGTCATGGAGTTGGACAAAGTGGGTTACTCCCTGGACGACTCTTCTCTTTGGTTTCCTTCTGTTTTGGAAGCTTTGACGGTGGAGACTCTTCTCACTGCTGCTAACTCTCTTGCTTGGTTTTTAACCACGGCAGGAGCTCTGTTAAATGATGTCAATGCTCCACCAGGATTCACTGCAATTGGGAAAAACTTTCCTTTCAAAGAACTTCATGCAAAGAATAATCCCGATCGAGAAAATGTAGATGGCAGCGAAACAGAGGATGATAAAGATGGGGATGAGGTTGATGATGATGATGCAAATGACCAGGATGGAGGGGAAGATGTTGAAGATTTCTCGGCCGAAGAAGGTGACGACGGAGATCTAGAAGATGACCCTGAAGCCAGTGGCAATGGAAGGGCTGGAGGAGATGAGGAAGACGATGGAGAAGATGACGATGATGATGCAAATGATCCAGATGAAGATGACGACGACGACGACGACGAAGATTTCTCCGCTGAAGAAGGAGATGAGGGTGATCAAGAGGATGACCCCGAAGCAAGTGGTAATGGAAGAATTGAAGGTGTTGAGGAGGATGAAGATGACGACGACGACGACGACGATGGAGATGAGGACGATGATGATGACGATGAAGAGGATGAAGATGATGGGGACGAAGATGATGACGAGGAAA
BLAST of MU45223 vs. TrEMBL
Match: A0A0A0LJ21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008670 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.3e-33
Identity = 80/131 (61.07%), Postives = 82/131 (62.60%), Query Frame = 3

Query: 207 MELDKVGYSLDDSSLWFPSXXXXXXXXXXXXXXNSLAWFLTTAGALLNDVNAPPGFTAIG 266
           MELDKVGYSLDD+SLWFPS              NSLAWFLTTAGALLNDVNAPPGFTAIG
Sbjct: 1   MELDKVGYSLDDTSLWFPSVLEALTVEALLTAANSLAWFLTTAGALLNDVNAPPGFTAIG 60

Query: 267 KNFPFKELHAKNNPDRENVDGSETXXXXXXXXXXXXXXXXXXXXXXVEDFSAXXXXXXXX 326
           KNFPF+ELHAKNNPDRENVDGSET                      VEDFSA        
Sbjct: 61  KNFPFEELHAKNNPDRENVDGSETEDDKDGDEVDDDDANDQDGGEDVEDFSAEEGDDGDL 120

Query: 327 XXXXXASGNGR 386
                ASGNGR
Sbjct: 121 EDDPEASGNGR 131

Query: 387 446
           
Sbjct: 181 131

Query: 447 506
           
Sbjct: 241 131

Query: 507 566
           
Sbjct: 301 131

Query: 567 600
           
Sbjct: 361 131

BLAST of MU45223 vs. NCBI nr
Match: gi|659070927|ref|XP_008457280.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 1.7e-34
Identity = 82/131 (62.60%), Postives = 82/131 (62.60%), Query Frame = 3

Query: 207 MELDKVGYSLDDSSLWFPSXXXXXXXXXXXXXXNSLAWFLTTAGALLNDVNAPPGFTAIG 266
           MELDKVGYSLDDSSLWFPS              NSLAWFLTTAGALLNDVNAPPGFTAIG
Sbjct: 1   MELDKVGYSLDDSSLWFPSVLEALTVETLLTAANSLAWFLTTAGALLNDVNAPPGFTAIG 60

Query: 267 KNFPFKELHAKNNPDRENVDGSETXXXXXXXXXXXXXXXXXXXXXXVEDFSAXXXXXXXX 326
           KNFPFKELHAKNNPDRENVDGSET                      VEDFSA        
Sbjct: 61  KNFPFKELHAKNNPDRENVDGSETEDDKDGDEVDDDDANDQDGGEDVEDFSAEEGDDGDL 120

Query: 327 XXXXXASGNGR 386
                ASGNGR
Sbjct: 121 EDDPEASGNGR 131

Query: 387 446
           
Sbjct: 181 131

Query: 447 506
           
Sbjct: 241 131

Query: 507 566
           
Sbjct: 301 131

Query: 567 600
           
Sbjct: 361 131

BLAST of MU45223 vs. NCBI nr
Match: gi|449443029|ref|XP_004139283.1| (PREDICTED: prostatic spermine-binding protein [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.1e-33
Identity = 80/131 (61.07%), Postives = 82/131 (62.60%), Query Frame = 3

Query: 207 MELDKVGYSLDDSSLWFPSXXXXXXXXXXXXXXNSLAWFLTTAGALLNDVNAPPGFTAIG 266
           MELDKVGYSLDD+SLWFPS              NSLAWFLTTAGALLNDVNAPPGFTAIG
Sbjct: 1   MELDKVGYSLDDTSLWFPSVLEALTVEALLTAANSLAWFLTTAGALLNDVNAPPGFTAIG 60

Query: 267 KNFPFKELHAKNNPDRENVDGSETXXXXXXXXXXXXXXXXXXXXXXVEDFSAXXXXXXXX 326
           KNFPF+ELHAKNNPDRENVDGSET                      VEDFSA        
Sbjct: 61  KNFPFEELHAKNNPDRENVDGSETEDDKDGDEVDDDDANDQDGGEDVEDFSAEEGDDGDL 120

Query: 327 XXXXXASGNGR 386
                ASGNGR
Sbjct: 121 EDDPEASGNGR 131

Query: 387 446
           
Sbjct: 181 131

Query: 447 506
           
Sbjct: 241 131

Query: 507 566
           
Sbjct: 301 131

Query: 567 600
           
Sbjct: 361 131

BLAST of MU45223 vs. NCBI nr
Match: gi|449443031|ref|XP_004139284.1| (PREDICTED: prostatic spermine-binding protein [Cucumis sativus])

HSP 1 Score: 70.9 bits (172), Expect = 4.3e-09
Identity = 38/84 (45.24%), Postives = 46/84 (54.76%), Query Frame = 3

Query: 207 MELDKVGYSLDDSSLWFPSXXXXXXXXXXXXXXNSLAWFLTTAGALLNDVNAPPGFTAIG 266
           MELD V +   + ++W  S              NSLA  L  AGA+LN  N  PG  AI 
Sbjct: 1   MELDCVSFV--ERTMWVRSVLEAMAVDTVFTTANSLACLLAAAGAMLNIANGTPGLAAIE 60

Query: 267 KNFPFKELHAKNNPDRENVDGSET 326
           + FPF ELH K +PD+EN DGSET
Sbjct: 61  ERFPFSELHKKESPDQENKDGSET 82

Query: 327 386
           
Sbjct: 121 82

Query: 387 446
           
Sbjct: 181 82

Query: 447 459
           
Sbjct: 241 82

BLAST of MU45223 vs. NCBI nr
Match: gi|659070923|ref|XP_008457268.1| (PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo])

HSP 1 Score: 69.7 bits (169), Expect = 9.5e-09
Identity = 38/84 (45.24%), Postives = 45/84 (53.57%), Query Frame = 3

Query: 207 MELDKVGYSLDDSSLWFPSXXXXXXXXXXXXXXNSLAWFLTTAGALLNDVNAPPGFTAIG 266
           MELD V +   + ++W  S              NSLA  L  AGA+LN  N  PG  AI 
Sbjct: 1   MELDCVSFV--ERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIE 60

Query: 267 KNFPFKELHAKNNPDRENVDGSET 326
           + FPF ELH K  PD+EN DGSET
Sbjct: 61  ERFPFSELHKKERPDQENKDGSET 82

Query: 327 386
           
Sbjct: 121 82

Query: 387 446
           
Sbjct: 181 82

Query: 447 459
           
Sbjct: 241 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LJ21_CUCSA2.3e-3361.07Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008670 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659070927|ref|XP_008457280.1|1.7e-3462.60PREDICTED: prostatic spermine-binding protein-like [Cucumis melo][more]
gi|449443029|ref|XP_004139283.1|1.1e-3361.07PREDICTED: prostatic spermine-binding protein [Cucumis sativus][more]
gi|449443031|ref|XP_004139284.1|4.3e-0945.24PREDICTED: prostatic spermine-binding protein [Cucumis sativus][more]
gi|659070923|ref|XP_008457268.1|9.5e-0945.24PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis ... [more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C004482MELO3C004482gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
BA10YI18FM1BA10YI18FM1EST
BA11YC17FM1BA11YC17FM1EST
BA11YH20FM1BA11YH20FM1EST
BA11YI18FM1BA11YI18FM1EST
BA12YG17FM1BA12YG17FM1EST
BA12YH13FM1BA12YH13FM1EST
BA14YF21FM1BA14YF21FM1EST
BA20YA07FM1BA20YA07FM1EST
BA22YC08FM1BA22YC08FM1EST
BA22YL10FM1BA22YL10FM1EST
BA22YN14FM1BA22YN14FM1EST
BA2YH13FM1BA2YH13FM1EST
BA2YO08FM1BA2YO08FM1EST
BA4YM09FM1BA4YM09FM1EST
BA5YA20FM1BA5YA20FM1EST
BA5YO18FM1BA5YO18FM1EST
BA7YO02FM1BA7YO02FM1EST
BA7YO20FM1BA7YO20FM1EST
BA8YD14FM1BA8YD14FM1EST
BA8YF04FM1BA8YF04FM1EST
CA17YL13FM1CA17YL13FM1EST
GA14YJ05FM1GA14YJ05FM1EST
GA17YL07FM1GA17YL07FM1EST
GA27YH13FM1GA27YH13FM1EST
GA47YN19FM1GA47YN19FM1EST


Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35711FAMILY NOT NAMEDcoord: 1..87
score: 5.0E-16coord: 142..222
score: 5.0
NoneNo IPR availablePANTHERPTHR35711:SF1EXPRESSED PROTEINcoord: 1..87
score: 5.0E-16coord: 142..222
score: 5.0